Gene RoseRS_3026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3026 
Symbol 
ID5209994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3806240 
End bp3808699 
Gene Length2460 bp 
Protein Length819 aa 
Translation table11 
GC content60% 
IMG OID640596618 
Productsignal transduction histidine kinase, nitrogen specific, NtrB 
Protein accessionYP_001277340 
Protein GI148657135 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.956622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAA TTCTGATCAT CGACGACAGC AAGCAAATCT GTTCCCTGCT TGCTGACCAT 
GTATTGCCGG AGCTGGGCTA TACTCCAACG ATTGCACATA CCGGGCGCCA GGGGCTGAAT
CGTCTCCGTC AGCGTACTCC TGATCTCATT CTCCTCGATC TGCAACTTCC GGACATCAGC
GGTCTCGACC TGTTGCGCCT GATTGCCCAG GAAGGGTACG ATGTGCCCGT TATCCTCATG
ACGGCGCATG GGTCGGAAGC GATTGCGGTC GAAGCGTTTC GTCTGGGAGC GCGGAACTAC
CTGATCAAGC CATTCAGTGA GACCGAGGCG CAGGCAGCAA TCGATCAGGC GCTGCGCGAA
CGGCGCCTCA GGCGCGAAAA AGAGCAACTC ACCCGCAACC TGCGGCAGCG CGTGCAGGAA
CTGACCGTCC TCTACTCGAT CGGCAAATCG GTCAGTTCTC TGCTCGATCT CGAAGAACTG
CTGGTGCGGA TCGTCGAAGC CGGCGTCTAT ATCACACGCG CCGAAGAGGG CTTTCTGCTG
CTGCGCGACC TGCACGCCAA CGAACTCTAC CTGCGTGCGG CGAAGAATCT TGGCGAGCAG
CGCGCCCAGA AGATGCGCAT GCCGATTGAC GACAGCCTGG CAGGGCAGGT GATCCGCACC
GGAAAGCCGA TCCGCCTGGA TAAAGCTGGC GCCGGCGCAC AGTTGAAAGT CATCACCGGA
TTCCTGGTGC GCGCGATCCT TCAGGTGCCG CTGATGGTCG GCAATCAGGT GATCGGTGTC
CTCGCGGTCG ATAATCAGCA ATCGGAACGC ACCTTCAGCG ACAATGATCA GTACCTGTTG
TCCGCGCTCG CCGATTATGC CGCCATCGCA ATCGAGAATG CACGCCTCTA TGAGCAGGTC
AAACAGAGCG AGGCGCGCTA CCGCGACCTG TTCGACAATG CCAACGACCT GATCTTCACC
CTCGACCGAC AGTTCAATCT GCGCAGTATC AACAAAGTCG CCCCGGCTAT CACCGGGTAT
GCCCAAAACG ACCTGATCGG TCGTCCGTTG CGCGAGGTGA GTTTCAGCGA CGCCTGGACC
TACGTGGAGC GCCTGTTCAA TGATGTGCTG CGGGGGCAGA CCGTTCCGCC GTTCGAGTTG
CAGATCCGAC GCCGTGATGA AGAGATCGCT GTACTCGAAG TCAGTGCGCG TTTGATCCGC
GATGGCGACG GTGCTGAAGC GATCCACTGC ATCGCCCGCG ACCTGACCGA GCGTCGCCGC
CTGGAAGAGC AACTCATCAA ATCGGAGAAA CTCTCCGCCA TTGGTCAACT GGTTGCCGGC
GTCGCGCACG AGGTCAATAA TCCGCTGACC AGTATCAGCG GCTACACCCA ACTGATGCTG
CGCGATGCCA GCCTGCCATC GGCGATCCGC GAAGACCTGC AACATATCAA CACCCAGGCG
GAGCGCGCAG CGCGCATCGT GCAGAACCTG TTGATGTTCG CCCGCGAACA CAAGCCGCAG
CGCATGCCCG TCGATATCAA CCAGGTGCTG CAAAGCACCC TTACCCTGCG CGCCTATCAA
CTGCGCGTCG ATAACATCAC GGTCGTCACC GATTTCGCTC CCGACCTGCC GCAAACGGTA
GCGGATCCGC ACCAGTTGCA GCAGGTCTTC CTCAACCTGA TCAACAATGC GCACCAGGCC
ATGATCGAGC GCGGCGGCAA GGGAACGCTC ACGCTGCGCA CCTCGGTTGA GCGGCGCGTT
GGCGAGGGCG GACGCGAGGA AACCTGCATC CGCGTCGCCG TGAACGACAC CGGCATCGGT
ATTCCGCCAC GCAACCTGAA TCGTATCTTC GACCCGTTCT TCACAACCAA GCCGATCGGG
CAGGGAACCG GATTAGGGTT GTCGATCTGC TTCGGCATCA TTCAGGAGCA TCACGGTCGC
ATCTGGGCGG AAAGCGAGGT TGGCGTCGGA ACGACAATGT ACGTTGAACT GCCGCTCGAC
CATGTTTATG AGCCACCGGG GATATCGTCC ATTGACTCAG AACCCGCATC TGTCGAAGCA
GAACCCCTTC CCGAAGAGTC GAACGGCGGC GCTGCGATCC TGGTGGTTGA CGACGAAGAG
GCGGTCAGCG CATTGCTGGC GCGACTGCTT ACCGATCTCG GTCATCGCCC GACCACAGTC
GCCAGCGGTG AGGCTGCGCT CGCTGCAATT GCGCGCCAAT CGTTCGACCT GATTCTGACC
GATATCAAAA TGCCTGGCAT GACCGGATTC GAACTGTACC AGCATATCAA GGAACACAAC
CCGCACCTGG CGCAGCGTAT CATTTTCATC ACCGGCGATA CAATCAGCGC CTCGACACAG
GCGCGCCTCG CGCAGACCGG AAGTCCCTAC ATCGCCAAAC CGTTTTCCAT TGAACGCCTT
GAAGCGCTGG TGAAGGCATG TCTTGCGCCC CAGGCAGCGG ATCATCTGCC CGCGCCCTGA
 
Protein sequence
MEEILIIDDS KQICSLLADH VLPELGYTPT IAHTGRQGLN RLRQRTPDLI LLDLQLPDIS 
GLDLLRLIAQ EGYDVPVILM TAHGSEAIAV EAFRLGARNY LIKPFSETEA QAAIDQALRE
RRLRREKEQL TRNLRQRVQE LTVLYSIGKS VSSLLDLEEL LVRIVEAGVY ITRAEEGFLL
LRDLHANELY LRAAKNLGEQ RAQKMRMPID DSLAGQVIRT GKPIRLDKAG AGAQLKVITG
FLVRAILQVP LMVGNQVIGV LAVDNQQSER TFSDNDQYLL SALADYAAIA IENARLYEQV
KQSEARYRDL FDNANDLIFT LDRQFNLRSI NKVAPAITGY AQNDLIGRPL REVSFSDAWT
YVERLFNDVL RGQTVPPFEL QIRRRDEEIA VLEVSARLIR DGDGAEAIHC IARDLTERRR
LEEQLIKSEK LSAIGQLVAG VAHEVNNPLT SISGYTQLML RDASLPSAIR EDLQHINTQA
ERAARIVQNL LMFAREHKPQ RMPVDINQVL QSTLTLRAYQ LRVDNITVVT DFAPDLPQTV
ADPHQLQQVF LNLINNAHQA MIERGGKGTL TLRTSVERRV GEGGREETCI RVAVNDTGIG
IPPRNLNRIF DPFFTTKPIG QGTGLGLSIC FGIIQEHHGR IWAESEVGVG TTMYVELPLD
HVYEPPGISS IDSEPASVEA EPLPEESNGG AAILVVDDEE AVSALLARLL TDLGHRPTTV
ASGEAALAAI ARQSFDLILT DIKMPGMTGF ELYQHIKEHN PHLAQRIIFI TGDTISASTQ
ARLAQTGSPY IAKPFSIERL EALVKACLAP QAADHLPAP