Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3026 |
Symbol | |
ID | 5209994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 3806240 |
End bp | 3808699 |
Gene Length | 2460 bp |
Protein Length | 819 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640596618 |
Product | signal transduction histidine kinase, nitrogen specific, NtrB |
Protein accession | YP_001277340 |
Protein GI | 148657135 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.956622 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGAAA TTCTGATCAT CGACGACAGC AAGCAAATCT GTTCCCTGCT TGCTGACCAT GTATTGCCGG AGCTGGGCTA TACTCCAACG ATTGCACATA CCGGGCGCCA GGGGCTGAAT CGTCTCCGTC AGCGTACTCC TGATCTCATT CTCCTCGATC TGCAACTTCC GGACATCAGC GGTCTCGACC TGTTGCGCCT GATTGCCCAG GAAGGGTACG ATGTGCCCGT TATCCTCATG ACGGCGCATG GGTCGGAAGC GATTGCGGTC GAAGCGTTTC GTCTGGGAGC GCGGAACTAC CTGATCAAGC CATTCAGTGA GACCGAGGCG CAGGCAGCAA TCGATCAGGC GCTGCGCGAA CGGCGCCTCA GGCGCGAAAA AGAGCAACTC ACCCGCAACC TGCGGCAGCG CGTGCAGGAA CTGACCGTCC TCTACTCGAT CGGCAAATCG GTCAGTTCTC TGCTCGATCT CGAAGAACTG CTGGTGCGGA TCGTCGAAGC CGGCGTCTAT ATCACACGCG CCGAAGAGGG CTTTCTGCTG CTGCGCGACC TGCACGCCAA CGAACTCTAC CTGCGTGCGG CGAAGAATCT TGGCGAGCAG CGCGCCCAGA AGATGCGCAT GCCGATTGAC GACAGCCTGG CAGGGCAGGT GATCCGCACC GGAAAGCCGA TCCGCCTGGA TAAAGCTGGC GCCGGCGCAC AGTTGAAAGT CATCACCGGA TTCCTGGTGC GCGCGATCCT TCAGGTGCCG CTGATGGTCG GCAATCAGGT GATCGGTGTC CTCGCGGTCG ATAATCAGCA ATCGGAACGC ACCTTCAGCG ACAATGATCA GTACCTGTTG TCCGCGCTCG CCGATTATGC CGCCATCGCA ATCGAGAATG CACGCCTCTA TGAGCAGGTC AAACAGAGCG AGGCGCGCTA CCGCGACCTG TTCGACAATG CCAACGACCT GATCTTCACC CTCGACCGAC AGTTCAATCT GCGCAGTATC AACAAAGTCG CCCCGGCTAT CACCGGGTAT GCCCAAAACG ACCTGATCGG TCGTCCGTTG CGCGAGGTGA GTTTCAGCGA CGCCTGGACC TACGTGGAGC GCCTGTTCAA TGATGTGCTG CGGGGGCAGA CCGTTCCGCC GTTCGAGTTG CAGATCCGAC GCCGTGATGA AGAGATCGCT GTACTCGAAG TCAGTGCGCG TTTGATCCGC GATGGCGACG GTGCTGAAGC GATCCACTGC ATCGCCCGCG ACCTGACCGA GCGTCGCCGC CTGGAAGAGC AACTCATCAA ATCGGAGAAA CTCTCCGCCA TTGGTCAACT GGTTGCCGGC GTCGCGCACG AGGTCAATAA TCCGCTGACC AGTATCAGCG GCTACACCCA ACTGATGCTG CGCGATGCCA GCCTGCCATC GGCGATCCGC GAAGACCTGC AACATATCAA CACCCAGGCG GAGCGCGCAG CGCGCATCGT GCAGAACCTG TTGATGTTCG CCCGCGAACA CAAGCCGCAG CGCATGCCCG TCGATATCAA CCAGGTGCTG CAAAGCACCC TTACCCTGCG CGCCTATCAA CTGCGCGTCG ATAACATCAC GGTCGTCACC GATTTCGCTC CCGACCTGCC GCAAACGGTA GCGGATCCGC ACCAGTTGCA GCAGGTCTTC CTCAACCTGA TCAACAATGC GCACCAGGCC ATGATCGAGC GCGGCGGCAA GGGAACGCTC ACGCTGCGCA CCTCGGTTGA GCGGCGCGTT GGCGAGGGCG GACGCGAGGA AACCTGCATC CGCGTCGCCG TGAACGACAC CGGCATCGGT ATTCCGCCAC GCAACCTGAA TCGTATCTTC GACCCGTTCT TCACAACCAA GCCGATCGGG CAGGGAACCG GATTAGGGTT GTCGATCTGC TTCGGCATCA TTCAGGAGCA TCACGGTCGC ATCTGGGCGG AAAGCGAGGT TGGCGTCGGA ACGACAATGT ACGTTGAACT GCCGCTCGAC CATGTTTATG AGCCACCGGG GATATCGTCC ATTGACTCAG AACCCGCATC TGTCGAAGCA GAACCCCTTC CCGAAGAGTC GAACGGCGGC GCTGCGATCC TGGTGGTTGA CGACGAAGAG GCGGTCAGCG CATTGCTGGC GCGACTGCTT ACCGATCTCG GTCATCGCCC GACCACAGTC GCCAGCGGTG AGGCTGCGCT CGCTGCAATT GCGCGCCAAT CGTTCGACCT GATTCTGACC GATATCAAAA TGCCTGGCAT GACCGGATTC GAACTGTACC AGCATATCAA GGAACACAAC CCGCACCTGG CGCAGCGTAT CATTTTCATC ACCGGCGATA CAATCAGCGC CTCGACACAG GCGCGCCTCG CGCAGACCGG AAGTCCCTAC ATCGCCAAAC CGTTTTCCAT TGAACGCCTT GAAGCGCTGG TGAAGGCATG TCTTGCGCCC CAGGCAGCGG ATCATCTGCC CGCGCCCTGA
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Protein sequence | MEEILIIDDS KQICSLLADH VLPELGYTPT IAHTGRQGLN RLRQRTPDLI LLDLQLPDIS GLDLLRLIAQ EGYDVPVILM TAHGSEAIAV EAFRLGARNY LIKPFSETEA QAAIDQALRE RRLRREKEQL TRNLRQRVQE LTVLYSIGKS VSSLLDLEEL LVRIVEAGVY ITRAEEGFLL LRDLHANELY LRAAKNLGEQ RAQKMRMPID DSLAGQVIRT GKPIRLDKAG AGAQLKVITG FLVRAILQVP LMVGNQVIGV LAVDNQQSER TFSDNDQYLL SALADYAAIA IENARLYEQV KQSEARYRDL FDNANDLIFT LDRQFNLRSI NKVAPAITGY AQNDLIGRPL REVSFSDAWT YVERLFNDVL RGQTVPPFEL QIRRRDEEIA VLEVSARLIR DGDGAEAIHC IARDLTERRR LEEQLIKSEK LSAIGQLVAG VAHEVNNPLT SISGYTQLML RDASLPSAIR EDLQHINTQA ERAARIVQNL LMFAREHKPQ RMPVDINQVL QSTLTLRAYQ LRVDNITVVT DFAPDLPQTV ADPHQLQQVF LNLINNAHQA MIERGGKGTL TLRTSVERRV GEGGREETCI RVAVNDTGIG IPPRNLNRIF DPFFTTKPIG QGTGLGLSIC FGIIQEHHGR IWAESEVGVG TTMYVELPLD HVYEPPGISS IDSEPASVEA EPLPEESNGG AAILVVDDEE AVSALLARLL TDLGHRPTTV ASGEAALAAI ARQSFDLILT DIKMPGMTGF ELYQHIKEHN PHLAQRIIFI TGDTISASTQ ARLAQTGSPY IAKPFSIERL EALVKACLAP QAADHLPAP
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