Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3739 |
Symbol | |
ID | 8359907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4699614 |
End bp | 4700414 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644965908 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003123402 |
Protein GI | 256422749 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.453489 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0202921 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAAT TCCTAATTCC TAATTCTTTA AAAGGGACAG CTTTTACGAT AGCCCCTACA ACCGATACTG AAAGCAAACT CGTATCTTCA GGCCGGAGAA ATATATATAA TATTATGCAG CGCATACTCG TAGTTGAAGA CGAAATCAAA GTGGCTAATA CCGTAAAAAA GGGATTGGAA GAGAATGGCT TTGAAGTAGA CGTCGCCTAT GACGGCCGCA TGGGTAAAAG CCTGGCTGCC AGCAATAACT ACGACCTGGT CATCCTGGAC CTCAACCTCC CCCATGCTAA CGGATACGAA GTATGCGAAG TGATCCGCCG TAAAAATAAT GCGATCCCCA TCATCATGCT TACCGCCCTG GGTGGTATGG ATGATAAGAT GCAGGCATTC GAACTGGGCG CTGACGATTA CCTGGTAAAA CCTTTCGACT TCAGAGAACT CATGGCCCGT ATTAGGGTGT TCCTCAAACG CGCCGGTTCC GAAGTACAGG AAAACAACCA GTATAAGATC GTTATCGGCG ACCTGGAAAT TGACCGTGAG AAGAAAGAAG TAACGCGTGG TGGCAAAAAG ATCGCCCTCA CCGCCAAAGA ATATCAGCTG CTGGAATTCC TGGCACTCCA TAAAGGAAAG GTGATCTCCA AACTGGTCAT TGCCGAAAAA GTATGGGACA TCGACTTCGA TACCGGTACC AACGTCATCG AAGTATATAT GAACTTCCTC CGGAAGAAGA TCGACAAAGA TTTTGATAAT AAGCTCCTGC ATACAAAAAC AGGAATGGGA TATTACCTGG CCGAAGAGTG A
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Protein sequence | MKQFLIPNSL KGTAFTIAPT TDTESKLVSS GRRNIYNIMQ RILVVEDEIK VANTVKKGLE ENGFEVDVAY DGRMGKSLAA SNNYDLVILD LNLPHANGYE VCEVIRRKNN AIPIIMLTAL GGMDDKMQAF ELGADDYLVK PFDFRELMAR IRVFLKRAGS EVQENNQYKI VIGDLEIDRE KKEVTRGGKK IALTAKEYQL LEFLALHKGK VISKLVIAEK VWDIDFDTGT NVIEVYMNFL RKKIDKDFDN KLLHTKTGMG YYLAEE
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