| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1055 |
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| Symbol | |
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| ID | 3739502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1171210 |
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| End bp | 1172736 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637778333 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_384020 |
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| Protein GI | 78222273 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.00334907 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCACAGA TCAAGGTATT GATTATCGAT GACGAGGCGG ATGTCTGCAC CTTTTTCCGC
CGCCTGCTGA CCAGAAAAGG GTATGACGTC GTCACGGCGT CAAAGGAGCC TGAGGCGATG
CGGGCCATCG AAGAGCACCG CTTCACCGTG GCCATGGTGG ATCTGAAGCT GCCGGATACC
GACGGCCTGA CCCTCCTTCA GGCGATCAAG GCCCGGCAGC CCGCCTGCGA AGTCATCATC
ATGACCGGCT ACAGCACCAT CAAGACGGCA GTCGCGGCCA TGCAGCTGGG GGCCTACGAG
TACCTGGAAA AGCCCTTCGA CGACATCGAC GAAATCGAGG CCCTGATCGA GAAGGCCGCC
AGCCACGGGT TCAACCTCCA GCAGGGGAGC GCCGCCGCCG AGGAGTGGGC CGAGGTGGCC
CGGGCCGTCG GTTTCCAGGT GGGGGCATCC TTGGGCATGA GGCGGCTCGT ATCCGTGGCC
CACAAGATCG CCGGCAAGAA TGTCACCGTG CTGATCCAGG GGAGCACCGG CACCGGGAAA
GAGGTCCTGG CCCGCTTTAT CCATTCCGCA TCGGGACGGG CGGATCAGGC GTTCATCCCG
GTCAACTGCG GCGCCCTGCC GGAGAACCTC CTGGAAAGCG AGCTCTTCGG CCACGAGAAA
GGGGCCTTCA CCGGCGCGGC CCAGCCCCGT CGCGGCATCT TCGAACTGGC CAACCGCGGC
ACCCTGTTCC TCGATGAAAT CGGCGATGCC AGCCCGCAAA TCCAGGTGAA ACTGCTGCGG
GTGCTGGAAA CCGGCGAATT CATGCGGGTA GGGGGTGAAA AACCCATCAA GACCGACGTG
AGGGTGATCG CCGCCACCAA CGTGGACCTG GAGCAGGCCA TCCGGGAGAA GACGTTCCGC
GAGGACCTCT ACTACCGGCT CAACGTGGTC CGGCTCGAAA TCCCGCCGCT CCGCTCCCGT
TCCGAGGACA TCCCCCAGCT GGCGGAGCAC TTTGTCCGTC AGCTCAACGC AGCGCTGCGG
ATTTCACCCC CGGCGCTGCG CCTTCTGCAG GGGTACGGAT GGCCGGGCAA TATCCGCCAG
CTTGCCAACG TCATCCGGCG CGCCGTGGTC ATGTGCAGCG GTGACACCAT CCTCCCCGAG
CATCTCGAAA GCACCCTTCT GAACAGCGCA GCCTTGGCCG GCGACACCTT TTCCCCCGTG
TCCTCGCAGG CCGGGGAGGG GGCTGTCTCC CTCTCCCCGG AGCGGCTCTG GCGAACCGAC
GTCAGCGTAG AGGAGTTGCG GAAGCTGGGT GCCGATGAGC TGAAGCGGAT GCTCGATTCC
CTGCGGGCAC TGGAGGGGAG GCTGATCACA GCCATGGGAG AAGGGGGCGG GGCTGCGCGG
CGGTGTCTCA AGGATACCGA GGAGGAAACC ATCAGGCAGG CACTGGAACA GTACCGGTGG
AACATCACCG AGACGGCGAA GGTCCTGGGC ATCGGCAGGA ACACCCTCTA CCGCAAGATC
AAGCAGTACG GGCTGGGGAG TTCCTGA
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| Protein sequence | MSQIKVLIID DEADVCTFFR RLLTRKGYDV VTASKEPEAM RAIEEHRFTV AMVDLKLPDT
DGLTLLQAIK ARQPACEVII MTGYSTIKTA VAAMQLGAYE YLEKPFDDID EIEALIEKAA
SHGFNLQQGS AAAEEWAEVA RAVGFQVGAS LGMRRLVSVA HKIAGKNVTV LIQGSTGTGK
EVLARFIHSA SGRADQAFIP VNCGALPENL LESELFGHEK GAFTGAAQPR RGIFELANRG
TLFLDEIGDA SPQIQVKLLR VLETGEFMRV GGEKPIKTDV RVIAATNVDL EQAIREKTFR
EDLYYRLNVV RLEIPPLRSR SEDIPQLAEH FVRQLNAALR ISPPALRLLQ GYGWPGNIRQ
LANVIRRAVV MCSGDTILPE HLESTLLNSA ALAGDTFSPV SSQAGEGAVS LSPERLWRTD
VSVEELRKLG ADELKRMLDS LRALEGRLIT AMGEGGGAAR RCLKDTEEET IRQALEQYRW
NITETAKVLG IGRNTLYRKI KQYGLGSS
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