Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0732 |
Symbol | |
ID | 8724462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 887302 |
End bp | 887997 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003385594 |
Protein GI | 284035664 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAATA CAGCAAAGCC CCACTTGTTG GTTGTTGAAG ACGAAACCAA AGTGGCCCTC TTCATAAAAA AAGGACTTGA AACGCAATCC CTCACCGTCA CCGTTGCAGC TGATGGTCGG GAAGGCAAAC GCCTGATTAG CTCGGAACGC TTTGACCTGG TTATCCTCGA TGTCAATCTA CCTTTTGTGA GCGGGCTGGA ATTGGCCGAA TACATACGCA CTAAAAATGC TCAAATGCCC ATTCTGATGC TCACGGCCCT CGACTCAACC ACCGACAAAC TCATGGGATT CGAAGCCGGA GCGGACGACT ATCTGGCCAA ACCATTCGAC TTTCTGGAGC TGGTGGCTCG CGTTCGGGCA TTACTCCGCC GGTCGGCCCC GCCCGAAGAA AGCCAGCCCA TACTGCGGCT GGCCGATCTG GAACTGGACC GTCAGCAAAA GGTAGCCCGA CGCGCCGGGC GAACCATCGA CCTGACCGCC CGGGAGTTTG CCTTACTGGA CTATCTGCTG CGCAATCAGG GAAGGGTCGT ATCGCGGGTC GATATTGCCG AACAGGTCTG GGATGTAGGT TTCGATACCG GCACTAATGT TATTGATGTG TATGTAAATT ACCTTCGGAA CAAAATTGAC AAAGGCGAAC CTGTGAAGCT GATTCATACC GTTGTTGGCT TCGGCTATGT GCTGAAGGAA AAATAA
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Protein sequence | MTNTAKPHLL VVEDETKVAL FIKKGLETQS LTVTVAADGR EGKRLISSER FDLVILDVNL PFVSGLELAE YIRTKNAQMP ILMLTALDST TDKLMGFEAG ADDYLAKPFD FLELVARVRA LLRRSAPPEE SQPILRLADL ELDRQQKVAR RAGRTIDLTA REFALLDYLL RNQGRVVSRV DIAEQVWDVG FDTGTNVIDV YVNYLRNKID KGEPVKLIHT VVGFGYVLKE K
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