| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1927 |
|---|
| Symbol | |
|---|
| ID | 5757225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | - |
|---|
| Start bp | 2133444 |
|---|
| End bp | 2134142 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 641303123 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001568937 |
|---|
| Protein GI | 160903356 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0440711 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAAAG TATTAATTGT TGAAGACGAT GAAGACATAA GAGATATATT AAAAACTTAT
CTTCGTTTAG AAGATTTACA AATCTTCGAA GCCGGTACGT TATCACAAAT GAGAAATGTT
TTAAACAAAG AATCAAACAT CGATATAATC TTACTAGATT TAATGCTACC CGATGGTAAC
GCAGTTGATG AGTTACCTAA AGTTAGGGCT TTGAATAGAG AAATAGGTAT AATAATCATT
TCTGCAAAAA ATACAGATGG AGAAAAAATC TTGGGAATTG AATCAGGAGC AGATGACTAT
ATCACTAAAC CCTTCAATCC CAGAGAAGTT ACAGCAAGGG TGAGGGCTTT ATTAAAAAGA
CTAAAAAAAT CCGAAAGTAA AATGATTTTT GGACCAATGG AAATATACTC AAACAATTAT
TTAGTAACTT ACAAAGGTAA AAATATTGAA TTGACCTCAA AAGAGTTTGA AATACTTGAT
CTATTAGCAA GGAATTCAGA AAAAGTTTAC ACCAGAGAAG AAATTATCGA CAAGATTTGG
TTTGGAGATG AATTTATTAC AGACCGGGTC ATCGACGTAC ATATAAGCAT GATCAGATCA
AAGATAGGGA AAGAATGGAT AAAAACTATT AGAAACGTAG GATACAAGTT CAACAAAAAC
GCTTATGCAG TAGATAACAA CGGTGAAAAT AAAATATGA
|
|---|
| Protein sequence | MPKVLIVEDD EDIRDILKTY LRLEDLQIFE AGTLSQMRNV LNKESNIDII LLDLMLPDGN
AVDELPKVRA LNREIGIIII SAKNTDGEKI LGIESGADDY ITKPFNPREV TARVRALLKR
LKKSESKMIF GPMEIYSNNY LVTYKGKNIE LTSKEFEILD LLARNSEKVY TREEIIDKIW
FGDEFITDRV IDVHISMIRS KIGKEWIKTI RNVGYKFNKN AYAVDNNGEN KI
|
|---|
| |