More than 300 homologs were found in PanDaTox collection
for query gene RSP_0316 on replicon NC_007493
Organism: Rhodobacter sphaeroides 2.4.1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007493  RSP_0316  LuxR family transcriptional regulator  100 
 
 		 213 aa  434  1e-121  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.155222  n/a   
 
 
-
 
NC_009049  Rsph17029_1961  response regulator receiver protein  99.53 
 
 		 247 aa  434  1e-121  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009428  Rsph17025_0978  two component LuxR family transcriptional regulator  88.73 
 
 		 247 aa  393  1e-108  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.159022  normal  1 
 
 
-
 
NC_009620  Smed_4826  two component LuxR family transcriptional regulator  46.01 
 
 		 267 aa  177  1e-43  Sinorhizobium medicae WSM419  Bacteria  normal  0.847801  normal  0.0520322 
 
 
-
 
NC_008254  Meso_2574  two component LuxR family transcriptional regulator  43 
 
 		 253 aa  174  6e-43  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012852  Rleg_6225  two component transcriptional regulator, LuxR family  41.23 
 
 		 258 aa  168  5e-41  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.173155 
 
 
-
 
NC_011371  Rleg2_6421  two component transcriptional regulator, LuxR family  41.23 
 
 		 251 aa  162  3e-39  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.872179  normal  1 
 
 
-
 
NC_009620  Smed_4801  two component LuxR family transcriptional regulator  42.44 
 
 		 259 aa  159  3e-38  Sinorhizobium medicae WSM419  Bacteria  normal  0.433912  normal  1 
 
 
-
 
NC_009668  Oant_3368  two component LuxR family transcriptional regulator  40.93 
 
 		 258 aa  156  2e-37  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0298943  n/a   
 
 
-
 
NC_004311  BRA0415  LuxR family transcriptional regulator  40.47 
 
 		 255 aa  153  2e-36  Brucella suis 1330  Bacteria  normal  0.272996  n/a   
 
 
-
 
NC_009504  BOV_A0358  LuxR family transcriptional regulator  40.47 
 
 		 255 aa  153  2e-36  Brucella ovis ATCC 25840  Bacteria  normal  1  n/a   
 
 
-
 
NC_009050  Rsph17029_3701  two component LuxR family transcriptional regulator  40 
 
 		 253 aa  141  6e-33  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.567008  normal  0.770716 
 
 
-
 
NC_010505  Mrad2831_4608  two component LuxR family transcriptional regulator  34.86 
 
 		 275 aa  130  1.0000000000000001e-29  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.313635  normal  1 
 
 
-
 
NC_007964  Nham_2943  two component LuxR family transcriptional regulator  38.76 
 
 		 351 aa  130  1.0000000000000001e-29  Nitrobacter hamburgensis X14  Bacteria  normal  0.692808  n/a   
 
 
-
 
NC_007406  Nwi_0957  LuxR family transcriptional regulator  37.14 
 
 		 342 aa  126  2.0000000000000002e-28  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.553991  normal  0.407109 
 
 
-
 
NC_009667  Oant_0267  two component LuxR family transcriptional regulator  38.75 
 
 		 241 aa  101  8e-21  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_009484  Acry_1738  response regulator receiver protein  34.1 
 
 		 267 aa  92.4  5e-18  Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
-
 
NC_009430  Rsph17025_4078  hypothetical protein  32.93 
 
 		 243 aa  80.1  0.00000000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0439982  normal  0.0668702 
 
 
-
 
NC_011666  Msil_2341  two component transcriptional regulator, LuxR family  36.5 
 
 		 209 aa  77.4  0.0000000000001  Methylocella silvestris BL2  Bacteria  n/a    normal  0.193906 
 
 
-
 
NC_012850  Rleg_0280  two component transcriptional regulator, LuxR family  30.84 
 
 		 245 aa  77.8  0.0000000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.417338  normal  1 
 
 
-
 
NC_007404  Tbd_1399  transcriptional regulator NarL  27.64 
 
 		 219 aa  76.3  0.0000000000003  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.0261138  normal  1 
 
 
-
 
NC_011369  Rleg2_0250  two component transcriptional regulator, LuxR family  29.03 
 
 		 260 aa  75.9  0.0000000000005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.664516  normal  1 
 
 
-
 
NC_007912  Sde_1571  XRE family transcriptional regulator  25.94 
 
 		 227 aa  74.7  0.0000000000009  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009668  Oant_3972  two component LuxR family transcriptional regulator  28 
 
 		 251 aa  73.9  0.000000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.111106  n/a   
 
 
-
 
NC_011894  Mnod_3782  two component transcriptional regulator, LuxR family  37.8 
 
 		 223 aa  72.4  0.000000000005  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_009620  Smed_4816  response regulator receiver protein  37.1 
 
 		 248 aa  71.6  0.000000000008  Sinorhizobium medicae WSM419  Bacteria  normal  0.890736  normal  0.794324 
 
 
-
 
NC_010506  Swoo_2245  two component LuxR family transcriptional regulator  34.56 
 
 		 218 aa  71.6  0.000000000009  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00227369  normal  0.0543921 
 
 
-
 
NC_009952  Dshi_1894  putative response regulator receiver protein  36.94 
 
 		 204 aa  71.2  0.00000000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.761861  normal  0.0769356 
 
 
-
 
NC_008044  TM1040_0960  two component LuxR family transcriptional regulator  32.31 
 
 		 214 aa  70.9  0.00000000001  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  32.2 
 
 		 229 aa  71.2  0.00000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_008347  Mmar10_2744  two component LuxR family transcriptional regulator  30.9 
 
 		 201 aa  70.9  0.00000000001  Maricaulis maris MCS10  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009720  Xaut_0991  two component LuxR family transcriptional regulator  33.55 
 
 		 210 aa  70.5  0.00000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_0555  two component transcriptional regulator, LuxR family  32.86 
 
 		 227 aa  70.1  0.00000000002  Variovorax paradoxus S110  Bacteria  normal  0.401942  n/a   
 
 
-
 
NC_013235  Namu_1210  two component transcriptional regulator, LuxR family  34.69 
 
 		 198 aa  70.5  0.00000000002  Nakamurella multipartita DSM 44233  Bacteria  normal  0.292938  normal  1 
 
 
-
 
NC_011989  Avi_0584  two component response regulator  33.16 
 
 		 215 aa  69.3  0.00000000004  Agrobacterium vitis S4  Bacteria  normal  0.566414  n/a   
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  35.94 
 
 		 206 aa  69.3  0.00000000004  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008254  Meso_0341  two component LuxR family transcriptional regulator  34.88 
 
 		 216 aa  69.3  0.00000000004  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  37.23 
 
 		 226 aa  69.3  0.00000000004  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  28.7 
 
 		 222 aa  68.9  0.00000000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal  1 
 
 
-
 
NC_012850  Rleg_4328  transcriptional regulator, LuxR family  50.75 
 
 		 260 aa  68.9  0.00000000005  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  decreased coverage  0.00000000127099  normal  0.0225245 
 
 
-
 
NC_009719  Plav_1690  two component LuxR family transcriptional regulator  36.04 
 
 		 215 aa  68.9  0.00000000005  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  0.104312 
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  38.46 
 
 		 215 aa  68.6  0.00000000006  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A1151  two-component response regulator  31.52 
 
 		 248 aa  68.9  0.00000000006  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  31.88 
 
 		 210 aa  68.2  0.00000000009  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_012857  Rpic12D_3598  two component transcriptional regulator, LuxR family  33.13 
 
 		 218 aa  68.2  0.00000000009  Ralstonia pickettii 12D  Bacteria  normal  0.329097  normal  0.731815 
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  31.88 
 
 		 210 aa  68.2  0.00000000009  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_010678  Rpic_4675  two component transcriptional regulator, LuxR family  33.13 
 
 		 218 aa  68.2  0.00000000009  Ralstonia pickettii 12J  Bacteria  normal  0.760252  normal  1 
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  31.88 
 
 		 210 aa  68.2  0.00000000009  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  31.88 
 
 		 210 aa  68.2  0.00000000009  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  31.88 
 
 		 210 aa  68.2  0.00000000009  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  31.88 
 
 		 210 aa  68.2  0.00000000009  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  31.88 
 
 		 210 aa  68.2  0.00000000009  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_008789  Hhal_1965  two component LuxR family transcriptional regulator  33.33 
 
 		 217 aa  68.2  0.00000000009  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK1321  response regulator  31.88 
 
 		 210 aa  68.2  0.0000000001  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  33.33 
 
 		 221 aa  67.8  0.0000000001  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_011899  Hore_19700  two component transcriptional regulator, LuxR family  33.79 
 
 		 209 aa  67.8  0.0000000001  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_007643  Rru_A3229  two component LuxR family transcriptional regulator  34.23 
 
 		 224 aa  67.8  0.0000000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_007794  Saro_1627  two component LuxR family transcriptional regulator  28.48 
 
 		 244 aa  67.8  0.0000000001  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0484719  n/a   
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  34.04 
 
 		 210 aa  68.2  0.0000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013757  Gobs_4064  two component transcriptional regulator, LuxR family  31.07 
 
 		 217 aa  67.4  0.0000000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_009620  Smed_4344  two component LuxR family transcriptional regulator  34.04 
 
 		 219 aa  67.4  0.0000000001  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.218307 
 
 
-
 
NC_009092  Shew_0842  two component LuxR family transcriptional regulator  32.12 
 
 		 209 aa  67.4  0.0000000001  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00000336278  normal  1 
 
 
-
 
NC_013441  Gbro_1936  regulatory protein LuxR  39.66 
 
 		 218 aa  67.4  0.0000000002  Gordonia bronchialis DSM 43247  Bacteria  normal  0.548655  n/a   
 
 
-
 
NC_009997  Sbal195_2606  two component LuxR family transcriptional regulator  31.54 
 
 		 220 aa  67  0.0000000002  Shewanella baltica OS195  Bacteria  hitchhiker  0.00642184  hitchhiker  0.00275886 
 
 
-
 
NC_007963  Csal_0866  two component LuxR family transcriptional regulator  36 
 
 		 220 aa  67.4  0.0000000002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_1588  two component LuxR family transcriptional regulator  32.31 
 
 		 220 aa  67  0.0000000002  Shewanella sp. MR-4  Bacteria  normal  0.0618082  normal  0.0591517 
 
 
-
 
NC_008322  Shewmr7_1663  two component LuxR family transcriptional regulator  32.31 
 
 		 220 aa  67  0.0000000002  Shewanella sp. MR-7  Bacteria  normal  0.0154836  unclonable  0.0000152825 
 
 
-
 
NC_008740  Maqu_2218  two component LuxR family transcriptional regulator  26.6 
 
 		 221 aa  67  0.0000000002  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  37.69 
 
 		 215 aa  66.6  0.0000000003  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_007348  Reut_B5066  LuxR response regulator receiver  30.77 
 
 		 217 aa  66.2  0.0000000003  Ralstonia eutropha JMP134  Bacteria  normal  0.822528  n/a   
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  28.91 
 
 		 223 aa  66.6  0.0000000003  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0556432 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  27.27 
 
 		 208 aa  66.6  0.0000000003  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_2486  two component LuxR family transcriptional regulator  31.54 
 
 		 220 aa  66.6  0.0000000003  Shewanella baltica OS185  Bacteria  normal  0.637953  n/a   
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  37.69 
 
 		 215 aa  66.6  0.0000000003  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  30.1 
 
 		 227 aa  66.6  0.0000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_011663  Sbal223_1858  two component transcriptional regulator, LuxR family  31.54 
 
 		 220 aa  66.6  0.0000000003  Shewanella baltica OS223  Bacteria  decreased coverage  0.00870294  decreased coverage  0.00000000166193 
 
 
-
 
NC_011369  Rleg2_3999  transcriptional regulator, LuxR family  49.25 
 
 		 260 aa  66.6  0.0000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.0000000117104  normal  1 
 
 
-
 
NC_008577  Shewana3_1732  two component LuxR family transcriptional regulator  32.31 
 
 		 220 aa  66.6  0.0000000003  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0049943  normal  0.183248 
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  37.69 
 
 		 215 aa  66.6  0.0000000003  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_0555  two component LuxR family transcriptional regulator  27.98 
 
 		 232 aa  66.2  0.0000000003  Acidovorax sp. JS42  Bacteria  normal  0.173401  normal  0.808062 
 
 
-
 
NC_009052  Sbal_2493  two component LuxR family transcriptional regulator  31.54 
 
 		 220 aa  66.6  0.0000000003  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  34.33 
 
 		 231 aa  65.9  0.0000000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal  1 
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  37.69 
 
 		 215 aa  65.9  0.0000000004  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  37.69 
 
 		 215 aa  65.9  0.0000000004  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  37.69 
 
 		 215 aa  65.9  0.0000000004  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  37.69 
 
 		 215 aa  65.9  0.0000000004  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  37.69 
 
 		 215 aa  65.9  0.0000000004  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  31.16 
 
 		 210 aa  66.2  0.0000000004  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_009621  Smed_5114  two component LuxR family transcriptional regulator  33.33 
 
 		 230 aa  65.9  0.0000000004  Sinorhizobium medicae WSM419  Bacteria  normal  1  decreased coverage  0.00554548 
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  36.03 
 
 		 225 aa  65.5  0.0000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  31.16 
 
 		 210 aa  65.5  0.0000000005  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_008340  Mlg_1669  two component LuxR family transcriptional regulator  33.57 
 
 		 221 aa  65.9  0.0000000005  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  31.16 
 
 		 210 aa  65.5  0.0000000005  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_004347  SO_2648  LuxR family DNA-binding response regulator  30.77 
 
 		 220 aa  65.5  0.0000000006  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011369  Rleg2_1389  two component transcriptional regulator, LuxR family  31.43 
 
 		 206 aa  65.1  0.0000000007  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.744509  normal  1 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  36.15 
 
 		 215 aa  65.1  0.0000000007  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  37.78 
 
 		 226 aa  64.7  0.0000000009  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_010717  PXO_04459  two-component system regulatory protein  30 
 
 		 213 aa  64.3  0.000000001  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_009438  Sputcn32_2247  two component LuxR family transcriptional regulator  31.78 
 
 		 220 aa  64.7  0.000000001  Shewanella putrefaciens CN-32  Bacteria  normal  0.998494  n/a   
 
 
-
 
NC_010524  Lcho_1574  two component LuxR family transcriptional regulator  26.83 
 
 		 219 aa  64.7  0.000000001  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.347453 
 
 
-
 
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