More than 300 homologs were found in PanDaTox collection
for query gene PputGB1_0607 on replicon NC_010322
Organism: Pseudomonas putida GB-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_0562  methyl-accepting chemotaxis sensory transducer  95.71 
 
 
653 aa  1156    Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0601  methyl-accepting chemotaxis sensory transducer  95.25 
 
 
653 aa  1145    Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5564  putative chemotaxis transducer  65.91 
 
 
657 aa  742    Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4603  methyl-accepting chemotaxis sensory transducer  90.35 
 
 
653 aa  1062    Pseudomonas putida W619  Bacteria  normal  normal  0.149752 
 
 
-
 
NC_009439  Pmen_0717  methyl-accepting chemotaxis sensory transducer  65.29 
 
 
654 aa  747    Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0622  chemotaxis sensory transducer  74.8 
 
 
648 aa  870    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0607  methyl-accepting chemotaxis sensory transducer  100 
 
 
653 aa  1271    Pseudomonas putida GB-1  Bacteria  normal  normal  0.100705 
 
 
-
 
NC_008463  PA14_64060  putative chemotaxis transducer  65.05 
 
 
657 aa  717    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  35.71 
 
 
541 aa  183  7e-45  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  35.77 
 
 
544 aa  179  1e-43  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  34.77 
 
 
637 aa  178  2e-43  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_008609  Ppro_3465  methyl-accepting chemotaxis sensory transducer  36.39 
 
 
423 aa  178  3e-43  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0157  methyl-accepting chemotaxis sensory transducer  36.12 
 
 
646 aa  178  3e-43  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.805637  n/a   
 
 
-
 
NC_007517  Gmet_2828  methyl-accepting chemotaxis sensory transducer  35.88 
 
 
550 aa  178  3e-43  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000014913 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  39.87 
 
 
650 aa  178  4e-43  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  32.81 
 
 
638 aa  177  5e-43  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_009052  Sbal_1494  methyl-accepting chemotaxis sensory transducer  34.86 
 
 
548 aa  177  6e-43  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0612  methyl-accepting chemotaxis sensory transducer  37.04 
 
 
543 aa  177  8e-43  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  34.4 
 
 
640 aa  176  9.999999999999999e-43  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  36.72 
 
 
773 aa  175  1.9999999999999998e-42  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  35.57 
 
 
543 aa  174  2.9999999999999996e-42  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  36.93 
 
 
568 aa  174  5e-42  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  36.39 
 
 
564 aa  173  9e-42  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  35.46 
 
 
541 aa  173  1e-41  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_002939  GSU1032  methyl-accepting chemotaxis protein  33.11 
 
 
645 aa  172  2e-41  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1396  methyl-accepting chemotaxis sensory transducer  36.09 
 
 
548 aa  172  2e-41  Shewanella putrefaciens CN-32  Bacteria  normal  0.664947  n/a   
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  37.58 
 
 
541 aa  171  3e-41  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  33.6 
 
 
640 aa  171  5e-41  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  38.13 
 
 
541 aa  171  5e-41  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  34.12 
 
 
629 aa  170  7e-41  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  34.93 
 
 
634 aa  170  8e-41  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2310  methyl-accepting chemotaxis sensory transducer  39.68 
 
 
492 aa  169  1e-40  Pseudomonas putida KT2440  Bacteria  normal  0.178377  decreased coverage  0.00000773933 
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  35.23 
 
 
630 aa  169  1e-40  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.4 
 
 
523 aa  169  1e-40  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_009512  Pput_3459  methyl-accepting chemotaxis sensory transducer  39.68 
 
 
492 aa  169  1e-40  Pseudomonas putida F1  Bacteria  normal  hitchhiker  0.000433284 
 
 
-
 
NC_008789  Hhal_0974  methyl-accepting chemotaxis sensory transducer  41.43 
 
 
532 aa  168  2e-40  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0956  methyl-accepting chemotaxis sensory transducer  34.66 
 
 
676 aa  169  2e-40  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  35.33 
 
 
630 aa  169  2e-40  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  35.33 
 
 
630 aa  169  2e-40  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_009654  Mmwyl1_0922  methyl-accepting chemotaxis sensory transducer  32.6 
 
 
674 aa  168  2.9999999999999998e-40  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  35.14 
 
 
630 aa  168  2.9999999999999998e-40  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_009901  Spea_1322  methyl-accepting chemotaxis sensory transducer  36.29 
 
 
667 aa  167  4e-40  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2016  methyl-accepting chemotaxis protein  34.6 
 
 
433 aa  167  4e-40  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000104003  n/a   
 
 
-
 
NC_007298  Daro_2728  chemotaxis sensory transducer  34.55 
 
 
544 aa  167  5e-40  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.00837045  normal  0.306222 
 
 
-
 
NC_010501  PputW619_1752  methyl-accepting chemotaxis sensory transducer  36.1 
 
 
492 aa  167  5.9999999999999996e-40  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.000000224536 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  36.84 
 
 
541 aa  167  5.9999999999999996e-40  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_004347  SO_3582  methyl-accepting chemotaxis protein  35.14 
 
 
541 aa  167  6.9999999999999995e-40  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008463  PA14_28050  putative chemotaxis transducer  38.72 
 
 
531 aa  167  6.9999999999999995e-40  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.652078  normal 
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  35.91 
 
 
541 aa  167  6.9999999999999995e-40  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1653  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.91 
 
 
521 aa  166  1.0000000000000001e-39  Pseudomonas putida GB-1  Bacteria  normal  0.976535  normal  0.292811 
 
 
-
 
NC_002947  PP_2111  aerotaxis receptor Aer-2  40.91 
 
 
521 aa  166  1.0000000000000001e-39  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0317394 
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  35.04 
 
 
630 aa  166  1.0000000000000001e-39  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  34.65 
 
 
634 aa  166  1.0000000000000001e-39  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009512  Pput_3628  methyl-accepting chemotaxis sensory transducer  40.91 
 
 
521 aa  166  1.0000000000000001e-39  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_1776  histidine kinase, HAMP region: chemotaxis sensory transducer  36.08 
 
 
543 aa  166  1.0000000000000001e-39  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.363817 
 
 
-
 
NC_007492  Pfl01_1833  chemotaxis sensory transducer, Pas/Pac sensor  44.92 
 
 
521 aa  166  1.0000000000000001e-39  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.884809  normal 
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.04 
 
 
630 aa  166  1.0000000000000001e-39  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  35.04 
 
 
630 aa  166  1.0000000000000001e-39  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  35.04 
 
 
630 aa  166  1.0000000000000001e-39  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4964  methyl-accepting chemotaxis protein  36.93 
 
 
545 aa  166  2.0000000000000002e-39  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  38.32 
 
 
633 aa  165  2.0000000000000002e-39  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  37.21 
 
 
411 aa  165  2.0000000000000002e-39  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_2776  methyl-accepting chemotaxis sensory transducer  34.85 
 
 
544 aa  166  2.0000000000000002e-39  Geobacter lovleyi SZ  Bacteria  normal  0.839191  n/a   
 
 
-
 
NC_007954  Sden_2955  chemotaxis sensory transducer  33.33 
 
 
497 aa  165  2.0000000000000002e-39  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  34.57 
 
 
712 aa  165  2.0000000000000002e-39  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_007492  Pfl01_4022  chemotaxis sensory transducer  35.14 
 
 
493 aa  165  3e-39  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2443  putative chemotaxis transducer  39.06 
 
 
531 aa  164  3e-39  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  36.24 
 
 
540 aa  164  4.0000000000000004e-39  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  37.42 
 
 
572 aa  164  4.0000000000000004e-39  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_26280  putative chemotaxis transducer  37.58 
 
 
545 aa  164  4.0000000000000004e-39  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.917899 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  34.29 
 
 
712 aa  164  5.0000000000000005e-39  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_008607  Ppro_3805  methyl-accepting chemotaxis sensory transducer  34.96 
 
 
422 aa  164  6e-39  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000721713  n/a   
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  33.96 
 
 
634 aa  164  6e-39  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  37.58 
 
 
674 aa  164  6e-39  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_010322  PputGB1_1912  methyl-accepting chemotaxis sensory transducer  38.44 
 
 
492 aa  164  6e-39  Pseudomonas putida GB-1  Bacteria  normal  0.407863  hitchhiker  0.000000143908 
 
 
-
 
NC_011146  Gbem_0798  methyl-accepting chemotaxis sensory transducer  36.01 
 
 
541 aa  164  6e-39  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  35.06 
 
 
642 aa  163  7e-39  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_010501  PputW619_1630  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.97 
 
 
521 aa  163  7e-39  Pseudomonas putida W619  Bacteria  normal  normal  0.814601 
 
 
-
 
NC_003910  CPS_3300  methyl-accepting chemotaxis protein  35.24 
 
 
535 aa  162  1e-38  Colwellia psychrerythraea 34H  Bacteria  normal  0.102754  n/a   
 
 
-
 
NC_009052  Sbal_3067  methyl-accepting chemotaxis sensory transducer  32.86 
 
 
539 aa  162  1e-38  Shewanella baltica OS155  Bacteria  normal  0.0971462  n/a   
 
 
-
 
NC_009665  Shew185_3077  methyl-accepting chemotaxis sensory transducer  32.86 
 
 
539 aa  162  1e-38  Shewanella baltica OS185  Bacteria  normal  0.417897  n/a   
 
 
-
 
NC_009656  PSPA7_5811  putative chemotaxis transducer  39.26 
 
 
647 aa  162  1e-38  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0525  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.99 
 
 
632 aa  162  1e-38  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  34.86 
 
 
628 aa  162  2e-38  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  36.77 
 
 
558 aa  162  2e-38  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2398  methyl-accepting chemotaxis sensory transducer  36.05 
 
 
656 aa  162  2e-38  Shewanella pealeana ATCC 700345  Bacteria  normal  0.201842  n/a   
 
 
-
 
NC_008739  Maqu_3979  methyl-accepting chemotaxis sensory transducer  36.74 
 
 
552 aa  162  2e-38  Marinobacter aquaeolei VT8  Bacteria  normal  0.594367  n/a   
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  37.19 
 
 
619 aa  162  2e-38  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_009997  Sbal195_3220  methyl-accepting chemotaxis sensory transducer  32.86 
 
 
539 aa  162  2e-38  Shewanella baltica OS195  Bacteria  normal  0.0243326  normal 
 
 
-
 
NC_008740  Maqu_0633  methyl-accepting chemotaxis sensory transducer  36.74 
 
 
552 aa  162  2e-38  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  36.74 
 
 
549 aa  161  3e-38  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  35.25 
 
 
559 aa  161  3e-38  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003896  methyl-accepting chemotaxis protein  32.31 
 
 
545 aa  161  3e-38  Vibrio sp. Ex25  Bacteria  decreased coverage  0.000288698  n/a   
 
 
-
 
NC_009783  VIBHAR_01753  hypothetical protein  32.87 
 
 
545 aa  161  3e-38  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009456  VC0395_1007  hemolysin secretion protein HylB  35.74 
 
 
548 aa  161  3e-38  Vibrio cholerae O395  Bacteria  normal  0.702356  n/a   
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  38.59 
 
 
647 aa  160  5e-38  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  33.89 
 
 
642 aa  160  6e-38  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  36.68 
 
 
638 aa  160  7e-38  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  34.24 
 
 
716 aa  160  9e-38  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009654  Mmwyl1_3322  methyl-accepting chemotaxis sensory transducer  36.48 
 
 
539 aa  159  1e-37  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.910778 
 
 
-
 
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