Gene Sbal195_3220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3220 
Symbol 
ID5755016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp3788091 
End bp3789710 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content44% 
IMG OID641289545 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001555642 
Protein GI160876326 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0243326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTCT TTAATAACAT TTCTATTTTT AAAAAAGTTA TCGCGATATT TATTTTAGCA 
GTCATAATTT TCGCTTTAAA CTTAAGCATT AGTGTTATCT CCATAAATAA AAATCGCACC
ACTCTTAACT ATATGGAGCA GCAAGTTTAC CAAAGGGTTG AACTCGCCAA TCAAAACGTG
TTTTTTATCC AACGACTCGA TGAGCTTTAT ACTCAATCCG TTTCTTTTGC CGACGAAGAC
CTGTTAACCA ATGCAGGTAC TATGTACGAA TCTTTACGCA AAAACCTCCA ACAGTTAGAC
AACGTCGATC CCTCACAAGC CAATCAACTC AACAATCTAT CGGCTAAATT AACCCGTTAT
AACGACATGA CAATTAAGCT GGCTAAAGGC ATGCTGGCAG GTACGATTGA TATGGCAAAT
ATTGGCCAAA TCAGCCAAGA AAAATCCCAA GCCTATGAAG CAGTGCTCAA TGAAATACAA
AACTACAAAC AAGAAAAAGT ACTCGAATTT AAACAATCAA TAAAAGAAGC AGGCGACAGA
TCGGAGCAAA GTTTATGGCT TACCCTCTCC ATCGGTATCG CTTTGCTGAT CGTGATGTTT
ATTGTCACTA TCGCCATTGC ACGCGCCATT AGCTCTTCTG CCCGTAATGT TGCCCAGTCA
TTGAGTGAAC TCGCCGATGG TAAGGGTGAT CTTAGCCATA AACTTAACGT GTCTGGTAGT
GATGAACTCG GCCAAGTGTC GAGTAACTTC AATCGATTCC TTGGGTTACT CGGTGATTCG
ATTCGCAGGG TGGTGAATGT TACCGATCCC TTGCTTGCAA GCTCGCACTT ACTCAAACAA
CGTATGGAAG ATGCAACGCA TGCAACTCAG AAACAAAGCC ATGATGCCAG TGCTGTGCAA
GTCTCAATGG AAGATATGCG CCACTCTGTC ATCGAAATTT CACAAAATGC GCGCCAAGCC
GCCAGTGCTG CCCAGATAGC CGAAAAAGAA GCCATGCAAG GTATGACTGT CGTCCAGCGG
ACTATTGATA TTTCACAGGA ATTAAATACG GGGATTCAGG CCGCTTCTAA CTCGATTAAT
GAACTTGCCA GAGACACTGA AAATGTCACC TCTATCTTAA ATGTGATTAC CTCGATTGCT
GAGCAAACTA ACCTGTTGGC ACTGAACGCT GCCATCGAAG CTGCCCGCGC GGGTGAGCAA
GGACGGGGCT TTGCCGTGGT AGCGGATGAA GTCCGTGCCC TCGCCTCTAA AACCGCAGAT
GCAACCACAG AAATTCGTCA TGTACTGCAA AACCTTAAAA CGGCGGCCAT TTCTTCGGTC
AATACCATGA ATGTGGCCAT GTCGAAATCT TCAGAAAATG AAAACAATGC CCAAAACACA
GGCAGTGCAT TAAAATCGAT TCAGCAGCAG ATTGTCAGTA TCAATAGCAT GAACACCCAC
ATTGCCTCGG CAACGGAAGA GCAAGCCTCA GTCGCTTCCC AAGTGGTCGA TAATGTCGTC
AATATGAACG CTTCATTCGA ACAGACATTG CAAATTCTGT CGCAGGTTCG CAATGTCTCC
GAAGGGCTAG TTGATTTTGC CGATGAACTG AAAAACGCCA CCTCACAATT CAAACTTTGA
 
Protein sequence
MNFFNNISIF KKVIAIFILA VIIFALNLSI SVISINKNRT TLNYMEQQVY QRVELANQNV 
FFIQRLDELY TQSVSFADED LLTNAGTMYE SLRKNLQQLD NVDPSQANQL NNLSAKLTRY
NDMTIKLAKG MLAGTIDMAN IGQISQEKSQ AYEAVLNEIQ NYKQEKVLEF KQSIKEAGDR
SEQSLWLTLS IGIALLIVMF IVTIAIARAI SSSARNVAQS LSELADGKGD LSHKLNVSGS
DELGQVSSNF NRFLGLLGDS IRRVVNVTDP LLASSHLLKQ RMEDATHATQ KQSHDASAVQ
VSMEDMRHSV IEISQNARQA ASAAQIAEKE AMQGMTVVQR TIDISQELNT GIQAASNSIN
ELARDTENVT SILNVITSIA EQTNLLALNA AIEAARAGEQ GRGFAVVADE VRALASKTAD
ATTEIRHVLQ NLKTAAISSV NTMNVAMSKS SENENNAQNT GSALKSIQQQ IVSINSMNTH
IASATEEQAS VASQVVDNVV NMNASFEQTL QILSQVRNVS EGLVDFADEL KNATSQFKL