More than 300 homologs were found in PanDaTox collection
for query gene Dbac_1884 on replicon NC_013173
Organism: Desulfomicrobium baculatum DSM 4028



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013173  Dbac_1884  two component transcriptional regulator, LuxR family  100 
 
 
219 aa  448  1e-125  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1038  two component transcriptional regulator, LuxR family  58.02 
 
 
215 aa  256  3e-67  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.942109  n/a   
 
 
-
 
NC_013173  Dbac_1883  two component transcriptional regulator, LuxR family  53.55 
 
 
222 aa  229  2e-59  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2015  two component transcriptional regulator, LuxR family  53.77 
 
 
219 aa  228  4e-59  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  37.56 
 
 
223 aa  161  7e-39  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  36.22 
 
 
215 aa  142  3e-33  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  36.22 
 
 
215 aa  142  3e-33  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  36.22 
 
 
215 aa  142  3e-33  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6032  response regulator receiver protein  35.86 
 
 
218 aa  141  9e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.53611  normal 
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  36.45 
 
 
218 aa  135  4e-31  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_5079  two component transcriptional regulator, LuxR family  37.13 
 
 
217 aa  135  5e-31  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.525358 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  34.1 
 
 
213 aa  134  9.999999999999999e-31  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0154  two component transcriptional regulator, LuxR family  35.1 
 
 
244 aa  134  9.999999999999999e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  33.65 
 
 
216 aa  131  7.999999999999999e-30  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  31.1 
 
 
218 aa  131  7.999999999999999e-30  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal 
 
 
-
 
NC_008726  Mvan_1646  two component LuxR family transcriptional regulator  34.69 
 
 
219 aa  130  2.0000000000000002e-29  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.92254 
 
 
-
 
NC_011769  DvMF_1021  two component transcriptional regulator, LuxR family  35.82 
 
 
216 aa  128  8.000000000000001e-29  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.794365 
 
 
-
 
NC_014165  Tbis_3390  LuxR family two component transcriptional regulator  35.96 
 
 
228 aa  127  9.000000000000001e-29  Thermobispora bispora DSM 43833  Bacteria  normal  0.269937  normal 
 
 
-
 
NC_008751  Dvul_0670  two component LuxR family transcriptional regulator  35.32 
 
 
216 aa  127  1.0000000000000001e-28  Desulfovibrio vulgaris DP4  Bacteria  normal  0.267154  normal 
 
 
-
 
NC_011662  Tmz1t_1311  two component transcriptional regulator, LuxR family  31.22 
 
 
226 aa  126  2.0000000000000002e-28  Thauera sp. MZ1T  Bacteria  normal  0.165019  n/a   
 
 
-
 
NC_007974  Rmet_4715  Two component LuxR family transcriptional regulator  30.85 
 
 
264 aa  126  3e-28  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1667  two component LuxR family transcriptional regulator  33.16 
 
 
219 aa  126  3e-28  Pseudomonas putida GB-1  Bacteria  normal  normal  0.869411 
 
 
-
 
NC_007492  Pfl01_3957  two component LuxR family transcriptional regulator  32.49 
 
 
219 aa  125  4.0000000000000003e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  31.75 
 
 
216 aa  125  4.0000000000000003e-28  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_2685  two component LuxR family transcriptional regulator  28.85 
 
 
222 aa  124  8.000000000000001e-28  Caulobacter sp. K31  Bacteria  normal  0.120511  normal 
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  31.71 
 
 
218 aa  123  2e-27  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  34.5 
 
 
215 aa  123  2e-27  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3615  two component LuxR family transcriptional regulator  32.65 
 
 
219 aa  123  2e-27  Pseudomonas putida F1  Bacteria  normal  0.378192  normal  0.274637 
 
 
-
 
NC_002939  GSU3229  LuxR family DNA-binding response regulator  29.47 
 
 
229 aa  122  3e-27  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2126  LuxR family DNA-binding response regulator  33.16 
 
 
219 aa  123  3e-27  Pseudomonas putida KT2440  Bacteria  normal  0.118459  normal  0.107719 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  31.98 
 
 
217 aa  123  3e-27  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_007298  Daro_2343  two component LuxR family transcriptional regulator  30.73 
 
 
211 aa  120  9.999999999999999e-27  Dechloromonas aromatica RCB  Bacteria  normal  0.999882  normal  0.0841394 
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  32.67 
 
 
213 aa  120  9.999999999999999e-27  Opitutus terrae PB90-1  Bacteria  normal  normal  0.226192 
 
 
-
 
NC_007908  Rfer_0894  two component LuxR family transcriptional regulator  30.99 
 
 
217 aa  120  9.999999999999999e-27  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  33.67 
 
 
216 aa  120  1.9999999999999998e-26  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3526  DNA-binding response regulator, LuxR family  32.83 
 
 
220 aa  120  1.9999999999999998e-26  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0134281  n/a   
 
 
-
 
NC_003295  RSc2312  two-component response regulator transcription regulator protein  31 
 
 
238 aa  119  3e-26  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.500036 
 
 
-
 
NC_010501  PputW619_1643  two component LuxR family transcriptional regulator  31.98 
 
 
219 aa  119  3e-26  Pseudomonas putida W619  Bacteria  normal  0.118638  normal 
 
 
-
 
NC_014151  Cfla_0857  two component transcriptional regulator, LuxR family  35.2 
 
 
219 aa  119  3.9999999999999996e-26  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0762303  normal 
 
 
-
 
NC_007519  Dde_2674  two component LuxR family transcriptional regulator  31.34 
 
 
215 aa  118  6e-26  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.721789  n/a   
 
 
-
 
NC_013757  Gobs_2941  two component transcriptional regulator, LuxR family  31.22 
 
 
219 aa  117  9.999999999999999e-26  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.911135  n/a   
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  28.43 
 
 
218 aa  117  1.9999999999999998e-25  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_1551  two component LuxR family transcriptional regulator  29.63 
 
 
229 aa  117  1.9999999999999998e-25  Opitutus terrae PB90-1  Bacteria  normal  normal  0.460798 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  32.16 
 
 
230 aa  116  1.9999999999999998e-25  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  30.96 
 
 
221 aa  116  3e-25  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  32.2 
 
 
224 aa  116  3e-25  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008255  CHU_1317  response regulator  29.52 
 
 
220 aa  115  3.9999999999999997e-25  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_009783  VIBHAR_02748  response regulator  30.35 
 
 
214 aa  115  3.9999999999999997e-25  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  31.34 
 
 
232 aa  115  5e-25  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_0648  two component transcriptional regulator, LuxR family  34.63 
 
 
215 aa  114  1.0000000000000001e-24  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_2635  two component transcriptional regulator, LuxR family  31.79 
 
 
217 aa  114  2.0000000000000002e-24  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000528497  hitchhiker  0.00476816 
 
 
-
 
NC_011725  BCB4264_A2245  DNA-binding response regulator, LuxR family  31.58 
 
 
213 aa  113  2.0000000000000002e-24  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_0373  response regulator receiver  30.5 
 
 
220 aa  113  2.0000000000000002e-24  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  32 
 
 
214 aa  113  2.0000000000000002e-24  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  29.44 
 
 
218 aa  114  2.0000000000000002e-24  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1385  two component LuxR family transcriptional regulator  30.2 
 
 
212 aa  112  3e-24  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_0919  two component LuxR family transcriptional regulator  30.58 
 
 
214 aa  113  3e-24  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  29.8 
 
 
215 aa  113  3e-24  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  33.01 
 
 
225 aa  113  3e-24  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_007005  Psyr_3299  LuxR response regulator receiver  29.29 
 
 
220 aa  112  4.0000000000000004e-24  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0158345  normal 
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  27.45 
 
 
218 aa  112  4.0000000000000004e-24  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  35.94 
 
 
207 aa  112  4.0000000000000004e-24  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  31.43 
 
 
216 aa  112  4.0000000000000004e-24  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_008340  Mlg_1669  two component LuxR family transcriptional regulator  33.01 
 
 
221 aa  112  4.0000000000000004e-24  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  27.45 
 
 
218 aa  112  4.0000000000000004e-24  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_011772  BCG9842_B3078  DNA-binding response regulator, LuxR family  31.58 
 
 
213 aa  112  5e-24  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000000185138 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  30.05 
 
 
222 aa  112  5e-24  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0239  two component transcriptional regulator, LuxR family  31.16 
 
 
230 aa  112  5e-24  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_0663  two component LuxR family transcriptional regulator  32.83 
 
 
219 aa  112  5e-24  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3105  two component transcriptional regulator, LuxR family  28.02 
 
 
223 aa  112  6e-24  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  31.58 
 
 
216 aa  111  7.000000000000001e-24  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  30.95 
 
 
216 aa  111  7.000000000000001e-24  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  30.89 
 
 
218 aa  111  8.000000000000001e-24  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  30.81 
 
 
226 aa  111  8.000000000000001e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  29.65 
 
 
218 aa  111  9e-24  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  32 
 
 
225 aa  111  9e-24  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  34.5 
 
 
211 aa  110  1.0000000000000001e-23  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011758  Mchl_5446  two component transcriptional regulator, LuxR family  29.8 
 
 
218 aa  110  1.0000000000000001e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.26634  normal 
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  30.85 
 
 
232 aa  110  1.0000000000000001e-23  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  29.58 
 
 
221 aa  110  1.0000000000000001e-23  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  28.43 
 
 
220 aa  110  1.0000000000000001e-23  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4857  two component transcriptional regulator, LuxR family  32.08 
 
 
234 aa  110  1.0000000000000001e-23  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.243741 
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  30.37 
 
 
220 aa  110  1.0000000000000001e-23  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  29.15 
 
 
225 aa  110  1.0000000000000001e-23  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  31.66 
 
 
216 aa  110  1.0000000000000001e-23  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  31.28 
 
 
219 aa  110  1.0000000000000001e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  28.57 
 
 
225 aa  110  2.0000000000000002e-23  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  30.19 
 
 
217 aa  110  2.0000000000000002e-23  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  30.35 
 
 
216 aa  110  2.0000000000000002e-23  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  29.7 
 
 
222 aa  110  2.0000000000000002e-23  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  31.63 
 
 
219 aa  110  2.0000000000000002e-23  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  30.58 
 
 
226 aa  110  2.0000000000000002e-23  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  30.41 
 
 
233 aa  110  2.0000000000000002e-23  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_013595  Sros_2604  response regulator receiver protein  28.72 
 
 
489 aa  109  3e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0367154  normal  0.116577 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  31.5 
 
 
239 aa  109  3e-23  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_009457  VC0395_A0833  response regulator  28.86 
 
 
227 aa  109  3e-23  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000189156  n/a   
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  30.88 
 
 
213 aa  109  3e-23  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_2730  response regulator receiver  32.65 
 
 
216 aa  109  3e-23  Gordonia bronchialis DSM 43247  Bacteria  normal  0.776601  n/a   
 
 
-
 
NC_009767  Rcas_1355  two component LuxR family transcriptional regulator  29.95 
 
 
230 aa  109  3e-23  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  28.93 
 
 
225 aa  109  3e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
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