More than 300 homologs were found in PanDaTox collection
for query gene Snas_4946 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  100 
 
 
224 aa  439  9.999999999999999e-123  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  70 
 
 
215 aa  307  9e-83  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  71.82 
 
 
222 aa  305  3e-82  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  68.18 
 
 
222 aa  300  1e-80  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  65.91 
 
 
225 aa  295  5e-79  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  70 
 
 
221 aa  289  2e-77  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  65.16 
 
 
221 aa  288  6e-77  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  65.3 
 
 
221 aa  284  8e-76  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  69.06 
 
 
224 aa  283  1.0000000000000001e-75  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  63.72 
 
 
217 aa  271  4.0000000000000004e-72  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  63.68 
 
 
244 aa  268  4e-71  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  64.19 
 
 
221 aa  267  8e-71  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  63.59 
 
 
220 aa  267  1e-70  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  64.16 
 
 
232 aa  262  3e-69  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  62.84 
 
 
219 aa  262  4e-69  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  60.99 
 
 
226 aa  259  2e-68  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  60.44 
 
 
230 aa  259  3e-68  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  58.64 
 
 
223 aa  255  3e-67  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  59.72 
 
 
223 aa  255  4e-67  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  63.13 
 
 
217 aa  254  7e-67  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  57.34 
 
 
233 aa  254  7e-67  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  57.89 
 
 
228 aa  248  4e-65  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  58.22 
 
 
224 aa  245  3e-64  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  59.82 
 
 
226 aa  245  4e-64  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_009921  Franean1_6511  two component LuxR family transcriptional regulator  59.35 
 
 
215 aa  245  4e-64  Frankia sp. EAN1pec  Bacteria  normal  normal  0.100644 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  59.65 
 
 
247 aa  245  4e-64  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013131  Caci_3748  two component transcriptional regulator, LuxR family  58.82 
 
 
236 aa  244  6e-64  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  59.09 
 
 
222 aa  244  6.999999999999999e-64  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  60.37 
 
 
226 aa  243  1.9999999999999999e-63  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  57.08 
 
 
228 aa  243  1.9999999999999999e-63  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  58.72 
 
 
222 aa  242  3e-63  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  57.53 
 
 
226 aa  241  5e-63  Frankia sp. EAN1pec  Bacteria  normal  normal  0.554715 
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  57.94 
 
 
224 aa  241  7e-63  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_013947  Snas_5265  two component transcriptional regulator, LuxR family  59.45 
 
 
218 aa  240  1e-62  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0303  two component LuxR family transcriptional regulator  59.53 
 
 
214 aa  236  1e-61  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  54.95 
 
 
226 aa  236  1e-61  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  54.3 
 
 
261 aa  237  1e-61  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  57.66 
 
 
226 aa  236  3e-61  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  56.52 
 
 
234 aa  235  4e-61  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  58.11 
 
 
225 aa  235  5.0000000000000005e-61  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  58.99 
 
 
225 aa  234  1.0000000000000001e-60  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  54.46 
 
 
227 aa  233  2.0000000000000002e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  56.62 
 
 
218 aa  233  2.0000000000000002e-60  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  55.56 
 
 
223 aa  232  3e-60  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  55.86 
 
 
241 aa  232  3e-60  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  56.76 
 
 
230 aa  232  3e-60  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  54.13 
 
 
225 aa  230  1e-59  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  57.14 
 
 
218 aa  231  1e-59  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  57.6 
 
 
220 aa  230  1e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  56.02 
 
 
230 aa  229  2e-59  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  56.42 
 
 
226 aa  229  2e-59  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  55.11 
 
 
229 aa  229  3e-59  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  58.72 
 
 
302 aa  229  3e-59  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  54.95 
 
 
230 aa  227  1e-58  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  55.11 
 
 
236 aa  226  3e-58  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  53.46 
 
 
220 aa  225  4e-58  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  54.87 
 
 
227 aa  225  4e-58  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  53.39 
 
 
221 aa  225  5.0000000000000005e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  55.25 
 
 
220 aa  224  6e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  55.86 
 
 
224 aa  224  7e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  58.06 
 
 
220 aa  224  9e-58  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_014210  Ndas_4857  two component transcriptional regulator, LuxR family  55.36 
 
 
234 aa  224  1e-57  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.243741 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  55.91 
 
 
229 aa  223  1e-57  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  54.79 
 
 
224 aa  223  1e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  54.79 
 
 
215 aa  223  1e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  55.66 
 
 
230 aa  223  2e-57  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  55.16 
 
 
231 aa  223  2e-57  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  53.57 
 
 
222 aa  223  3e-57  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  53.81 
 
 
223 aa  222  3e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  55.05 
 
 
225 aa  221  4.9999999999999996e-57  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  54.91 
 
 
227 aa  221  9e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  53.57 
 
 
221 aa  220  9.999999999999999e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  54.59 
 
 
216 aa  219  1.9999999999999999e-56  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013131  Caci_1616  two component transcriptional regulator, LuxR family  52.89 
 
 
226 aa  219  1.9999999999999999e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0231149  normal  0.0629914 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  51.52 
 
 
231 aa  219  1.9999999999999999e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  52.27 
 
 
221 aa  219  3e-56  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  53.27 
 
 
214 aa  219  3.9999999999999997e-56  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  52.94 
 
 
225 aa  218  5e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  53.85 
 
 
234 aa  218  6e-56  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  54.42 
 
 
217 aa  218  6e-56  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  54.13 
 
 
224 aa  218  7e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  43.14 
 
 
261 aa  218  8.999999999999998e-56  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  53.21 
 
 
239 aa  217  1e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  58.14 
 
 
221 aa  217  1e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  53.57 
 
 
225 aa  217  1e-55  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  49.38 
 
 
250 aa  216  2e-55  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  54.13 
 
 
239 aa  216  2e-55  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  50.92 
 
 
234 aa  216  2e-55  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  51.3 
 
 
234 aa  216  2e-55  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  53.21 
 
 
218 aa  215  4e-55  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  51.3 
 
 
233 aa  215  5e-55  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  51.11 
 
 
225 aa  214  8e-55  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  54.3 
 
 
225 aa  214  9.999999999999999e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  53.33 
 
 
228 aa  213  9.999999999999999e-55  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  53 
 
 
215 aa  213  1.9999999999999998e-54  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  54.75 
 
 
225 aa  213  1.9999999999999998e-54  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  49.57 
 
 
242 aa  213  1.9999999999999998e-54  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  53.67 
 
 
241 aa  212  2.9999999999999995e-54  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  51.43 
 
 
211 aa  212  2.9999999999999995e-54  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  50.92 
 
 
219 aa  213  2.9999999999999995e-54  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
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