More than 300 homologs were found in PanDaTox collection
for query gene Pmen_2444 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009439  Pmen_2444  methyl-accepting chemotaxis sensory transducer  100 
 
 
489 aa  963    Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.00221824  normal 
 
 
-
 
NC_007492  Pfl01_4022  chemotaxis sensory transducer  63.67 
 
 
493 aa  587  1e-166  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1752  methyl-accepting chemotaxis sensory transducer  62.25 
 
 
492 aa  561  1e-158  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.000000224536 
 
 
-
 
NC_009512  Pput_3459  methyl-accepting chemotaxis sensory transducer  63.03 
 
 
492 aa  552  1e-156  Pseudomonas putida F1  Bacteria  normal  hitchhiker  0.000433284 
 
 
-
 
NC_004578  PSPTO_2254  methyl-accepting chemotaxis protein  64.78 
 
 
491 aa  548  1e-154  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.177753  n/a   
 
 
-
 
NC_010322  PputGB1_1912  methyl-accepting chemotaxis sensory transducer  61.94 
 
 
492 aa  542  1e-153  Pseudomonas putida GB-1  Bacteria  normal  0.407863  hitchhiker  0.000000143908 
 
 
-
 
NC_002947  PP_2310  methyl-accepting chemotaxis sensory transducer  62.55 
 
 
492 aa  541  9.999999999999999e-153  Pseudomonas putida KT2440  Bacteria  normal  0.178377  decreased coverage  0.00000773933 
 
 
-
 
NC_008463  PA14_27000  putative chemotaxis transducer  65.38 
 
 
490 aa  541  9.999999999999999e-153  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2059  histidine kinase, HAMP region: chemotaxis sensory transducer  63.56 
 
 
491 aa  538  9.999999999999999e-153  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.116428  normal  0.539616 
 
 
-
 
NC_009656  PSPA7_2287  putative chemotaxis transducer  64.77 
 
 
490 aa  533  1e-150  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0436901  n/a   
 
 
-
 
NC_008740  Maqu_2374  methyl-accepting chemotaxis sensory transducer  44.13 
 
 
406 aa  249  6e-65  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  40.8 
 
 
712 aa  232  1e-59  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  45.35 
 
 
637 aa  230  3e-59  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  40.27 
 
 
713 aa  230  5e-59  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  41.69 
 
 
716 aa  229  6e-59  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  40.52 
 
 
712 aa  229  1e-58  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_008463  PA14_43220  putative methyl-accepting chemotaxis transducer  43.54 
 
 
652 aa  228  2e-58  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.625872 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  45.1 
 
 
636 aa  227  4e-58  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  39.72 
 
 
620 aa  225  1e-57  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  41.05 
 
 
543 aa  224  3e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  42 
 
 
640 aa  224  3e-57  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  47.68 
 
 
679 aa  223  6e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  41.36 
 
 
674 aa  221  1.9999999999999999e-56  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  39.43 
 
 
552 aa  221  3e-56  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  45.82 
 
 
629 aa  221  3e-56  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  43.55 
 
 
559 aa  221  3e-56  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  39.89 
 
 
568 aa  220  5e-56  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  40.34 
 
 
540 aa  219  7e-56  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  41.62 
 
 
639 aa  218  2e-55  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  39.43 
 
 
552 aa  218  2e-55  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  42.28 
 
 
638 aa  218  2e-55  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  41.37 
 
 
541 aa  218  2.9999999999999998e-55  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  41.98 
 
 
638 aa  217  4e-55  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_5092  histidine kinase, HAMP region: chemotaxis sensory transducer  43.41 
 
 
640 aa  217  4e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  46.01 
 
 
714 aa  217  5e-55  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  41.98 
 
 
638 aa  217  5e-55  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  42.78 
 
 
650 aa  216  5e-55  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  44.89 
 
 
640 aa  216  5.9999999999999996e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.36 
 
 
523 aa  216  9e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_009997  Sbal195_3742  methyl-accepting chemotaxis sensory transducer  38.95 
 
 
620 aa  215  9.999999999999999e-55  Shewanella baltica OS195  Bacteria  normal  normal  0.35347 
 
 
-
 
NC_009052  Sbal_0691  methyl-accepting chemotaxis sensory transducer  38.95 
 
 
620 aa  215  9.999999999999999e-55  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3551  methyl-accepting chemotaxis sensory transducer  38.95 
 
 
620 aa  215  9.999999999999999e-55  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00183884 
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  41.67 
 
 
638 aa  215  1.9999999999999998e-54  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2091  methyl-accepting chemotaxis sensory transducer  40.44 
 
 
541 aa  214  1.9999999999999998e-54  Pseudomonas putida F1  Bacteria  normal  0.596764  normal 
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  42.52 
 
 
638 aa  215  1.9999999999999998e-54  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  38.94 
 
 
620 aa  215  1.9999999999999998e-54  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  38.44 
 
 
637 aa  214  1.9999999999999998e-54  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  43.42 
 
 
640 aa  214  2.9999999999999995e-54  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4382  chemotaxis sensory transducer  44.17 
 
 
738 aa  214  2.9999999999999995e-54  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.218372 
 
 
-
 
NC_008321  Shewmr4_0824  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
554 aa  213  4.9999999999999996e-54  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00067966 
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  37.72 
 
 
554 aa  213  5.999999999999999e-54  Shewanella sp. MR-7  Bacteria  normal  normal  0.927661 
 
 
-
 
NC_008322  Shewmr7_0630  methyl-accepting chemotaxis sensory transducer  37.83 
 
 
554 aa  213  7e-54  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  38.92 
 
 
541 aa  213  7.999999999999999e-54  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_0847  methyl-accepting chemotaxis sensory transducer  39.06 
 
 
620 aa  213  7.999999999999999e-54  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.566037  n/a   
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  39.3 
 
 
773 aa  213  9e-54  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_009439  Pmen_2471  methyl-accepting chemotaxis sensory transducer  39.54 
 
 
425 aa  213  9e-54  Pseudomonas mendocina ymp  Bacteria  normal  0.817651  normal 
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  43.81 
 
 
647 aa  212  1e-53  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3491  methyl-accepting chemotaxis sensory transducer  37.54 
 
 
554 aa  212  1e-53  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2263  methyl-accepting chemotaxis sensory transducer  40.63 
 
 
541 aa  211  2e-53  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  36.9 
 
 
554 aa  211  2e-53  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_009665  Shew185_3619  methyl-accepting chemotaxis sensory transducer  38.95 
 
 
620 aa  211  2e-53  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3789  methyl-accepting chemotaxis sensory transducer  37.13 
 
 
554 aa  211  2e-53  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0641  methyl-accepting chemotaxis sensory transducer  36.84 
 
 
568 aa  211  2e-53  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_3323  methyl-accepting chemotaxis sensory transducer  37.54 
 
 
554 aa  211  2e-53  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  34.89 
 
 
554 aa  211  3e-53  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  36.62 
 
 
554 aa  211  3e-53  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_3532  methyl-accepting chemotaxis sensory transducer  35.75 
 
 
555 aa  211  3e-53  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  37.32 
 
 
638 aa  211  3e-53  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_011663  Sbal223_3601  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.84 
 
 
554 aa  211  3e-53  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  38.44 
 
 
621 aa  211  3e-53  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  36.9 
 
 
554 aa  211  3e-53  Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  40.29 
 
 
634 aa  210  4e-53  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  37.43 
 
 
554 aa  210  4e-53  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  36.62 
 
 
554 aa  210  5e-53  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  43.08 
 
 
541 aa  210  5e-53  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2451  methyl-accepting chemotaxis sensory transducer  46.36 
 
 
655 aa  209  6e-53  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.932747 
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.62 
 
 
554 aa  209  7e-53  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  41.64 
 
 
564 aa  209  8e-53  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  43.42 
 
 
714 aa  209  8e-53  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4520  methyl-accepting chemotaxis sensory transducer  45.02 
 
 
639 aa  209  8e-53  Pseudomonas putida F1  Bacteria  normal  normal  0.886367 
 
 
-
 
NC_003910  CPS_4372  methyl-accepting chemotaxis protein  43.52 
 
 
619 aa  209  9e-53  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  39.16 
 
 
558 aa  209  9e-53  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  40.23 
 
 
628 aa  209  9e-53  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_002947  PP_4658  methyl-accepting chemotaxis sensory transducer  45.02 
 
 
639 aa  209  1e-52  Pseudomonas putida KT2440  Bacteria  normal  0.415489  normal 
 
 
-
 
NC_009665  Shew185_3666  methyl-accepting chemotaxis sensory transducer  36.95 
 
 
554 aa  209  1e-52  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1929  methyl-accepting chemotaxis sensory transducer  40.17 
 
 
662 aa  209  1e-52  Shewanella loihica PV-4  Bacteria  normal  0.23754  normal  0.0188929 
 
 
-
 
NC_007912  Sde_0081  putative methyl-accepting chemotaxis sensory transducer  43.86 
 
 
544 aa  208  1e-52  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_011313  VSAL_II1022  methyl-accepting chemotaxis protein  40 
 
 
628 aa  208  2e-52  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.771007  n/a   
 
 
-
 
NC_004578  PSPTO_5554  methyl-accepting chemotaxis protein  40.86 
 
 
676 aa  208  2e-52  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3269  methyl-accepting chemotaxis sensory transducer  33.42 
 
 
605 aa  208  2e-52  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.000515244  n/a   
 
 
-
 
NC_009512  Pput_4895  methyl-accepting chemotaxis sensory transducer  42.16 
 
 
739 aa  207  3e-52  Pseudomonas putida F1  Bacteria  normal  0.247309  normal 
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  42.86 
 
 
714 aa  207  4e-52  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_003910  CPS_3864  methyl-accepting chemotaxis protein  36.67 
 
 
568 aa  207  5e-52  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_5071  methyl-accepting chemotaxis sensory transducer  42.02 
 
 
647 aa  206  5e-52  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_5021  methyl-accepting chemotaxis sensory transducer  42.16 
 
 
647 aa  206  6e-52  Pseudomonas putida KT2440  Bacteria  normal  0.0828859  normal 
 
 
-
 
NC_010501  PputW619_2074  methyl-accepting chemotaxis sensory transducer  43.47 
 
 
714 aa  206  6e-52  Pseudomonas putida W619  Bacteria  normal  0.203311  normal 
 
 
-
 
NC_007005  Psyr_2634  histidine kinase, HAMP region: chemotaxis sensory transducer  39.28 
 
 
542 aa  206  6e-52  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.917034  normal 
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  40.06 
 
 
628 aa  206  6e-52  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_007492  Pfl01_3768  chemotaxis sensory transducer  44.37 
 
 
560 aa  206  6e-52  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0379  histidine kinase, HAMP region: chemotaxis sensory transducer  42.12 
 
 
647 aa  206  7e-52  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.454626  normal 
 
 
-
 
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