More than 300 homologs were found in PanDaTox collection
for query gene Pcar_0452 on replicon NC_007498
Organism: Pelobacter carbinolicus DSM 2380



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007498  Pcar_0452  cAMP-binding protein  100 
 
 
160 aa  318  1.9999999999999998e-86  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000000000045265  n/a   
 
 
-
 
NC_007947  Mfla_1926  cyclic nucleotide-binding domain-containing protein  36.92 
 
 
168 aa  83.2  0.000000000000001  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  36.51 
 
 
228 aa  82.8  0.000000000000002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  34.59 
 
 
228 aa  80.5  0.000000000000008  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_011831  Cagg_2419  cyclic nucleotide-binding protein  33.81 
 
 
563 aa  80.1  0.00000000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.871595  normal 
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  35.34 
 
 
226 aa  79.7  0.00000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_007492  Pfl01_1398  cyclic nucleotide-binding protein  31.54 
 
 
157 aa  78.2  0.00000000000004  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.908167  normal 
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  33.83 
 
 
226 aa  78.2  0.00000000000004  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  35.34 
 
 
228 aa  78.2  0.00000000000005  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  33.08 
 
 
225 aa  76.3  0.0000000000001  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1780  cyclic nucleotide-binding protein  32.74 
 
 
156 aa  75.9  0.0000000000002  Pseudomonas mendocina ymp  Bacteria  normal  0.489231  normal 
 
 
-
 
NC_004578  PSPTO_3912  cyclic nucleotide-binding protein  34.51 
 
 
144 aa  74.3  0.0000000000006  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.262178  n/a   
 
 
-
 
NC_007948  Bpro_0173  cyclic nucleotide-binding domain-containing protein  34.07 
 
 
211 aa  73.9  0.0000000000008  Polaromonas sp. JS666  Bacteria  normal  0.106244  normal 
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  32.33 
 
 
225 aa  73.6  0.000000000001  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1573  cyclic nucleotide-binding  33.63 
 
 
158 aa  72.8  0.000000000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.490025  hitchhiker  0.00990577 
 
 
-
 
NC_010501  PputW619_3891  cyclic nucleotide-binding protein  32.23 
 
 
155 aa  73.2  0.000000000002  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0602  transcriptional regulator, Crp/Fnr family  33.05 
 
 
225 aa  70.9  0.000000000006  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.628877 
 
 
-
 
NC_007948  Bpro_0234  cyclic nucleotide-binding domain-containing protein  33.6 
 
 
186 aa  70.9  0.000000000007  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  32.82 
 
 
225 aa  70.9  0.000000000007  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  32.82 
 
 
225 aa  69.7  0.00000000002  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  33.59 
 
 
224 aa  69.3  0.00000000002  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_1866  putative transcriptional regulator, Crp/Fnr family  32.37 
 
 
182 aa  68.6  0.00000000003  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007794  Saro_2885  cyclic nucleotide-binding domain-containing protein  33.1 
 
 
321 aa  68.2  0.00000000005  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  32 
 
 
225 aa  68.2  0.00000000005  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  33.33 
 
 
226 aa  67.8  0.00000000006  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  33.08 
 
 
220 aa  67.4  0.00000000008  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  30.83 
 
 
225 aa  67.4  0.00000000008  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  27.27 
 
 
219 aa  67  0.00000000009  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  28.89 
 
 
232 aa  66.6  0.0000000001  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_013131  Caci_8903  transcriptional regulator, Crp/Fnr family  34.26 
 
 
224 aa  65.9  0.0000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4601  cyclic nucleotide-binding protein  35.43 
 
 
154 aa  65.5  0.0000000003  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.930738 
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  34.13 
 
 
242 aa  65.1  0.0000000004  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_013440  Hoch_5417  cyclic nucleotide-binding protein  27.69 
 
 
419 aa  64.3  0.0000000006  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0881735  normal  0.0681678 
 
 
-
 
NC_008554  Sfum_4027  cyclic nucleotide-binding protein  31.41 
 
 
413 aa  64.7  0.0000000006  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_2918  transcriptional regulator, Crp/Fnr family  32.81 
 
 
226 aa  63.5  0.000000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.172063  normal  0.392966 
 
 
-
 
NC_008781  Pnap_3212  CRP/FNR family transcriptional regulator  26.12 
 
 
229 aa  63.5  0.000000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0543887  normal 
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  29.6 
 
 
225 aa  63.5  0.000000001  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_0049  Crp/FNR family transcriptional regulator  28.48 
 
 
252 aa  63.5  0.000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.422683  n/a   
 
 
-
 
NC_011662  Tmz1t_1763  transcriptional regulator, Crp/Fnr family  26.47 
 
 
223 aa  63.2  0.000000001  Thauera sp. MZ1T  Bacteria  normal  0.796832  n/a   
 
 
-
 
NC_008781  Pnap_0116  cyclic nucleotide-binding protein  27.27 
 
 
194 aa  63.5  0.000000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.143738 
 
 
-
 
NC_007484  Noc_1061  Crp family transcriptional regulator  31.54 
 
 
214 aa  62.4  0.000000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0336611  n/a   
 
 
-
 
NC_010725  Mpop_3019  cyclic nucleotide-binding protein  35.48 
 
 
149 aa  62.4  0.000000003  Methylobacterium populi BJ001  Bacteria  normal  0.852704  normal 
 
 
-
 
NC_013510  Tcur_1118  transcriptional regulator, Crp/Fnr family  33.9 
 
 
240 aa  62.4  0.000000003  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_2896  cyclic nucleotide-binding  35.48 
 
 
194 aa  61.6  0.000000004  Methylobacterium extorquens PA1  Bacteria  normal  0.633977  normal 
 
 
-
 
NC_011757  Mchl_3122  cyclic nucleotide-binding protein  35.48 
 
 
149 aa  61.6  0.000000004  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.196103 
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  34.26 
 
 
225 aa  60.8  0.000000007  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_009484  Acry_2102  CRP/FNR family transcriptional regulator  31.25 
 
 
227 aa  60.5  0.000000009  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  26.15 
 
 
231 aa  60.5  0.00000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  31.58 
 
 
224 aa  59.7  0.00000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1294  cyclic nucleotide-binding: regulatory protein, Crp  28.7 
 
 
220 aa  59.3  0.00000002  Dechloromonas aromatica RCB  Bacteria  normal  0.957461  normal  0.413121 
 
 
-
 
NC_007948  Bpro_3800  Crp/FNR family transcriptional regulator  29.41 
 
 
225 aa  59.3  0.00000002  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_2323  CRP/FNR family transcriptional regulator  26.97 
 
 
233 aa  58.5  0.00000003  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00053006  n/a   
 
 
-
 
NC_007973  Rmet_1527  cyclic nucleotide-binding domain-containing protein  32.69 
 
 
167 aa  58.9  0.00000003  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.0000128576  hitchhiker  0.00383137 
 
 
-
 
NC_013235  Namu_0718  transcriptional regulator, Crp/Fnr family  34.65 
 
 
224 aa  58.9  0.00000003  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_012858  Rleg_7131  putative transcriptional regulator, Crp/Fnr family  32 
 
 
155 aa  58.9  0.00000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.331754 
 
 
-
 
NC_008609  Ppro_2444  Crp/FNR family transcriptional regulator  26.83 
 
 
238 aa  58.5  0.00000003  Pelobacter propionicus DSM 2379  Bacteria  decreased coverage  0.000577484  n/a   
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  32 
 
 
234 aa  58.5  0.00000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_010511  M446_2719  cyclic nucleotide-binding protein  34.68 
 
 
151 aa  58.5  0.00000004  Methylobacterium sp. 4-46  Bacteria  normal  0.460468  normal  0.384505 
 
 
-
 
NC_010524  Lcho_4099  Crp/FNR family transcriptional regulator  34.38 
 
 
237 aa  58.2  0.00000004  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00000000655046 
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  25.56 
 
 
239 aa  58.2  0.00000005  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_011894  Mnod_4405  cyclic nucleotide-binding protein  33.87 
 
 
148 aa  58.2  0.00000005  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_0505  cyclic nucleotide-binding protein  30.39 
 
 
224 aa  57.8  0.00000007  Gordonia bronchialis DSM 43247  Bacteria  normal  0.287437  n/a   
 
 
-
 
NC_011145  AnaeK_2607  cyclic nucleotide-binding protein  28.57 
 
 
215 aa  57.8  0.00000007  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4167  cyclic nucleotide-binding protein  34.02 
 
 
570 aa  57.4  0.00000007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4086  putative transcriptional regulator, Crp/Fnr family  31.93 
 
 
209 aa  57.4  0.00000007  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0944516 
 
 
-
 
NC_011884  Cyan7425_4893  cyclic nucleotide-binding protein  30.15 
 
 
237 aa  56.6  0.0000001  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  26.67 
 
 
231 aa  56.6  0.0000001  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_013440  Hoch_6450  putative transcriptional regulator, Crp/Fnr family  24.35 
 
 
253 aa  56.6  0.0000001  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_2750  transcriptional regulator, Crp/Fnr family  24.31 
 
 
222 aa  56.6  0.0000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.0000000354449  normal  0.602467 
 
 
-
 
NC_011366  Rleg2_5981  cyclic nucleotide-binding protein  32 
 
 
155 aa  57  0.0000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2129  Crp/Fnr family transcriptional regulator  32.61 
 
 
225 aa  57  0.0000001  Meiothermus ruber DSM 1279  Bacteria  normal  0.185639  normal  0.344505 
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  32.28 
 
 
226 aa  56.6  0.0000001  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_011884  Cyan7425_0841  cyclic nucleotide-binding protein  31.86 
 
 
160 aa  55.8  0.0000002  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.108052 
 
 
-
 
NC_011989  Avi_4229  hypothetical protein  31.76 
 
 
151 aa  55.8  0.0000002  Agrobacterium vitis S4  Bacteria  unclonable  0.000114025  n/a   
 
 
-
 
NC_011992  Dtpsy_3494  cyclic nucleotide-binding protein  30.6 
 
 
173 aa  55.8  0.0000002  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  31.58 
 
 
225 aa  56.2  0.0000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_009565  TBFG_13707  Cpr/FNR family transcriptional regulator  30.39 
 
 
224 aa  56.2  0.0000002  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.0333343 
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  28.81 
 
 
251 aa  56.2  0.0000002  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_009720  Xaut_1772  cyclic nucleotide-binding protein  28.15 
 
 
161 aa  56.2  0.0000002  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0691544 
 
 
-
 
NC_011891  A2cp1_2700  cyclic nucleotide-binding protein  29.37 
 
 
215 aa  56.2  0.0000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  hitchhiker  0.00108848  n/a   
 
 
-
 
NC_013440  Hoch_3831  cyclic nucleotide-binding protein  27.34 
 
 
435 aa  55.8  0.0000002  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0387698 
 
 
-
 
NC_008254  Meso_3425  cyclic nucleotide-binding protein  30.23 
 
 
151 aa  55.5  0.0000003  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0894  cyclic nucleotide-binding  27.91 
 
 
226 aa  55.1  0.0000004  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  33.04 
 
 
226 aa  55.1  0.0000004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_008782  Ajs_4137  cyclic nucleotide-binding protein  29.85 
 
 
177 aa  55.1  0.0000004  Acidovorax sp. JS42  Bacteria  normal  normal  0.252066 
 
 
-
 
NC_007406  Nwi_1117  patatin  29.57 
 
 
621 aa  54.7  0.0000005  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.142446 
 
 
-
 
NC_007604  Synpcc7942_1814  cyclic nucleotide-binding domain-containing protein  28.17 
 
 
242 aa  54.7  0.0000005  Synechococcus elongatus PCC 7942  Bacteria  normal  0.38579  normal  0.245711 
 
 
-
 
NC_008554  Sfum_3249  cyclic nucleotide-binding protein  31.43 
 
 
171 aa  54.7  0.0000005  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_4596  transcriptional regulator, Crp/Fnr family  31.3 
 
 
230 aa  54.3  0.0000006  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_5025  putative transcriptional regulator, Crp/Fnr family  30.71 
 
 
1056 aa  54.7  0.0000006  Spirosoma linguale DSM 74  Bacteria  decreased coverage  0.00524189  normal 
 
 
-
 
NC_008554  Sfum_1513  cyclic nucleotide-binding protein  32.22 
 
 
308 aa  54.3  0.0000006  Syntrophobacter fumaroxidans MPOB  Bacteria  hitchhiker  0.00604424  normal 
 
 
-
 
NC_013422  Hneap_1461  putative transcriptional regulator, Crp/Fnr family  28.57 
 
 
159 aa  53.9  0.0000008  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1678  transcriptional regulator, Crp/Fnr family  25.74 
 
 
234 aa  54.3  0.0000008  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2074  transcriptional regulator, Crp/Fnr family  31.53 
 
 
225 aa  53.9  0.0000009  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.971908 
 
 
-
 
NC_010505  Mrad2831_5013  cyclic nucleotide-binding protein  33.06 
 
 
147 aa  53.9  0.0000009  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.32822  normal  0.191008 
 
 
-
 
NC_007517  Gmet_0750  Crp/FNR family transcriptional regulator  24.83 
 
 
238 aa  53.1  0.000001  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  22.98 
 
 
243 aa  53.5  0.000001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_010511  M446_0723  Crp/FNR family transcriptional regulator  30.43 
 
 
228 aa  53.5  0.000001  Methylobacterium sp. 4-46  Bacteria  normal  0.362046  normal  0.190371 
 
 
-
 
NC_013440  Hoch_4460  putative transcriptional regulator, Crp/Fnr family  28.21 
 
 
171 aa  53.5  0.000001  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A1119  catabolite gene activator (cAMP receptor protein) (cAMP-regulatory protein)  30.91 
 
 
222 aa  53.9  0.000001  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.106899 
 
 
-
 
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