| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4167 |
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| Symbol | |
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| ID | 5736028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 5314116 |
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| End bp | 5315828 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641281321 |
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| Product | cyclic nucleotide-binding protein |
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| Protein accession | YP_001546927 |
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| Protein GI | 159900680 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase)
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATAT CTGAAGGTCG CAGCATTGAG ATTGATGCCC GTTGGGAAAA CCTCGCCGCC
CTCACCGATT ACACCACCGA GATCGAAACT GAATTTGCCC TAACCAGCGA ACAAGCCTTT
GTGCTGGGTT TAGTGATCGA AGAAATTGTC ACCAATATCA TTAAATATAG CTATGCCGAG
CAAGGTGGCC CGCTACAATT GCACAGCACG CTCGAAAATG GCGAGCTAGC GATTCGGATT
CTTGATCGCG GCCAGCCATT TAACCCCGAC GATGCTGATC CGCCCGATCT CTTCGCCAGC
ATCCACGATC GTCAAGTTGG CGGTTTGGGG GTGTTTTTGG TGCGCGAAAT GGCCGATTCG
ATCACCTACC ACCATGATGA TGCCAGTGGT TGGAATACCT TGATCGTCAC CAAAAAAGCT
TCAACTGAGG CCAGCATTGC TCCGTTGGTC GAGTTTTTAG AGCAATTGCC ATTGTTCCAC
GAAGTTGATC AGGCGACGAT TCAAAATTTG GTACAAAGTG CTGAGCATGT GCGACTTGCC
CCAGGCGAAA CATTATTCAG CGAAGGCGAT AGCGGCGACG ATTGCTATAT TGTGATGGCT
GGCGATGTAG ATGTAATCAA AGCGCTGGCG ACCGAAACAA TTTTGCTGGA GCGCTGTCGG
CCTGGGGCAA TTTTGGGCGA AATGGCTTTG ATCGATAATA GCCCTCGCGC GGCTAGCGTG
CGGGCGCGAA CCGCCGCAAC CCTGTTGCGC ATCACCGAGG CCGAATTTGT AACCTTGATG
CATGCCAACC CAACCACAGC CATGGCGTTG CTGCGTGGCG GCACAACGCG CCTGCGTCAG
GCAAATGCGC AAATGTTGGG TGGCCTCGAA AAGAAGAATC TTGAACTAGC GAGCGCCTAC
GAAGAACTCA AATCGGCCCA GCAAGAACTG TTGCGCCTTG AACGGATTGA GCGGGAATTG
GCGATTGCCC GCGATATTCA GCGCTTCTTT TTGCCGCCCA ACATTCCTCA ACCTGAGGGC
TGGCAAATTG TGGCTTTCAA CCAAGGCGCG TTAGAGGTTG GCGGCGATTT TTACGATGTG
ATCAAGCTTG GCGGCAATAA AATTGGTTTG GTCGTGGCCG ATGCCTGTGG CAAAGGCGTG
CCAGCGGCCT TGTTTGTGGC GCTGACGCGC TCGTTGCTGC ATTCCAACGC TCAATCGCTG
GCAGCGCGGC CTGAAATTGC GACTGATCCG TTGGCCTTGC TGACGGCGGC AATCACCATG
ACCAATAACT ACATTTCGCG TGAACATGGC GCAAGCAATA TGTTCACGAC CCTGTTTTTT
GCCGCATTTG ATCCGCAAAC TGGCGAGTTG GCCTATGTCA ACGCTGGCCA TAACCCGCCG
ATTATCATCA ATCGCACCAG CCGTACTTTG CGTTATTTAG AAGGCACAGG CTTGCCCTTG
GGGATTATGG AAGATCTGCC ATACAAGGCC AAGAGCACCA TCCTCGCCGC CGATGAATAT
TTCTTGGGCT TTACCGACGG CGCAACCGAG GCCTTTAATC TGGCAGGCGA GGTGTTTGAT
GATGCAGCCT TGACCAATGT GCTCAAAAAT GGCGATTTCC ACGATGCCCA ATCATTGCTC
GACAGCGTGT GGCGGGCAAT CGAGAGCTTT GTTGGCGAAG CTGAACAAGC CGATGACATT
ACCTTGCTAA CGGTTAGTCG TAATGGTTCG TAG
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| Protein sequence | MAISEGRSIE IDARWENLAA LTDYTTEIET EFALTSEQAF VLGLVIEEIV TNIIKYSYAE
QGGPLQLHST LENGELAIRI LDRGQPFNPD DADPPDLFAS IHDRQVGGLG VFLVREMADS
ITYHHDDASG WNTLIVTKKA STEASIAPLV EFLEQLPLFH EVDQATIQNL VQSAEHVRLA
PGETLFSEGD SGDDCYIVMA GDVDVIKALA TETILLERCR PGAILGEMAL IDNSPRAASV
RARTAATLLR ITEAEFVTLM HANPTTAMAL LRGGTTRLRQ ANAQMLGGLE KKNLELASAY
EELKSAQQEL LRLERIEREL AIARDIQRFF LPPNIPQPEG WQIVAFNQGA LEVGGDFYDV
IKLGGNKIGL VVADACGKGV PAALFVALTR SLLHSNAQSL AARPEIATDP LALLTAAITM
TNNYISREHG ASNMFTTLFF AAFDPQTGEL AYVNAGHNPP IIINRTSRTL RYLEGTGLPL
GIMEDLPYKA KSTILAADEY FLGFTDGATE AFNLAGEVFD DAALTNVLKN GDFHDAQSLL
DSVWRAIESF VGEAEQADDI TLLTVSRNGS
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