More than 300 homologs were found in PanDaTox collection
for query gene Sfum_3249 on replicon NC_008554
Organism: Syntrophobacter fumaroxidans MPOB



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008554  Sfum_3249  cyclic nucleotide-binding protein  100 
 
 
171 aa  347  5e-95  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_0723  cyclic nucleotide-binding domain-containing protein  38.93 
 
 
173 aa  114  7.999999999999999e-25  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_012858  Rleg_7131  putative transcriptional regulator, Crp/Fnr family  34.29 
 
 
155 aa  102  2e-21  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.331754 
 
 
-
 
NC_011366  Rleg2_5981  cyclic nucleotide-binding protein  35 
 
 
155 aa  100  1e-20  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4601  cyclic nucleotide-binding protein  31.25 
 
 
154 aa  98.2  5e-20  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.930738 
 
 
-
 
NC_008554  Sfum_4030  cyclic nucleotide-binding protein  32.39 
 
 
173 aa  95.9  2e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.900362 
 
 
-
 
NC_011988  Avi_5607  cAMP-dependent protein kinase regulatory subunit  35.71 
 
 
154 aa  95.5  3e-19  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_2719  cyclic nucleotide-binding protein  31.94 
 
 
151 aa  82.4  0.000000000000003  Methylobacterium sp. 4-46  Bacteria  normal  0.460468  normal  0.384505 
 
 
-
 
NC_011894  Mnod_4405  cyclic nucleotide-binding protein  32.39 
 
 
148 aa  80.1  0.00000000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_1928  cyclic nucleotide-binding protein  29.41 
 
 
153 aa  77.8  0.00000000000006  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR2005  cyclic nucleotide-binding protein  28.68 
 
 
153 aa  77.4  0.00000000000009  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_3425  cyclic nucleotide-binding protein  30.87 
 
 
151 aa  77  0.0000000000001  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_3942  cAMP-dependent protein kinase regulatory subunit  28.57 
 
 
154 aa  77  0.0000000000001  Agrobacterium vitis S4  Bacteria  normal  0.644852  n/a   
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  31.75 
 
 
219 aa  76.3  0.0000000000002  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_009667  Oant_0964  cyclic nucleotide-binding protein  31.15 
 
 
152 aa  74.7  0.0000000000006  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_2896  cyclic nucleotide-binding  30.32 
 
 
194 aa  74.7  0.0000000000006  Methylobacterium extorquens PA1  Bacteria  normal  0.633977  normal 
 
 
-
 
NC_010725  Mpop_3019  cyclic nucleotide-binding protein  31.58 
 
 
149 aa  73.6  0.000000000001  Methylobacterium populi BJ001  Bacteria  normal  0.852704  normal 
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  27.86 
 
 
231 aa  73.6  0.000000000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_002967  TDE2725  cyclic nucleotide binding/GGDEF domain-containing protein  33.07 
 
 
322 aa  73.2  0.000000000002  Treponema denticola ATCC 35405  Bacteria  normal  0.792666  n/a   
 
 
-
 
NC_011757  Mchl_3122  cyclic nucleotide-binding protein  30.83 
 
 
149 aa  73.2  0.000000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.196103 
 
 
-
 
NC_011831  Cagg_2419  cyclic nucleotide-binding protein  28.99 
 
 
563 aa  72.8  0.000000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.871595  normal 
 
 
-
 
NC_009972  Haur_4167  cyclic nucleotide-binding protein  38.1 
 
 
570 aa  70.1  0.00000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1291  cyclic nucleotide-binding protein  30.25 
 
 
164 aa  69.7  0.00000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.234039  normal 
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  28.28 
 
 
236 aa  69.7  0.00000000002  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  29.2 
 
 
236 aa  68.6  0.00000000004  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_010505  Mrad2831_5013  cyclic nucleotide-binding protein  27.08 
 
 
147 aa  67.8  0.00000000006  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.32822  normal  0.191008 
 
 
-
 
NC_011126  HY04AAS1_0349  transcriptional regulator, Crp/Fnr family  27.69 
 
 
219 aa  67.8  0.00000000007  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.000181532  n/a   
 
 
-
 
NC_008346  Swol_1598  hypothetical protein  30.91 
 
 
407 aa  67.8  0.00000000007  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.303519  n/a   
 
 
-
 
NC_014150  Bmur_0098  putative transcriptional regulator, Crp/Fnr family  31.58 
 
 
211 aa  67  0.0000000001  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  4.4392599999999995e-22  n/a   
 
 
-
 
NC_006368  lpp0611  hypothetical protein  26.57 
 
 
738 aa  66.2  0.0000000002  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_012791  Vapar_1284  transcriptional regulator, Crp/Fnr family  28.26 
 
 
224 aa  66.6  0.0000000002  Variovorax paradoxus S110  Bacteria  normal  0.304913  n/a   
 
 
-
 
NC_013173  Dbac_0350  cyclic nucleotide-binding protein  26.8 
 
 
164 aa  66.2  0.0000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0491  cyclic nucleotide-binding protein  31.43 
 
 
410 aa  65.5  0.0000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0215963  n/a   
 
 
-
 
NC_013441  Gbro_0505  cyclic nucleotide-binding protein  30.51 
 
 
224 aa  65.5  0.0000000004  Gordonia bronchialis DSM 43247  Bacteria  normal  0.287437  n/a   
 
 
-
 
NC_013739  Cwoe_2918  transcriptional regulator, Crp/Fnr family  32.09 
 
 
226 aa  64.3  0.0000000007  Conexibacter woesei DSM 14684  Bacteria  normal  0.172063  normal  0.392966 
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  26.57 
 
 
236 aa  64.3  0.0000000009  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  26.57 
 
 
236 aa  64.3  0.0000000009  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_009338  Mflv_1371  CRP/FNR family transcriptional regulator  30.51 
 
 
224 aa  63.5  0.000000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0955358 
 
 
-
 
NC_008726  Mvan_5435  CRP/FNR family transcriptional regulator  30.51 
 
 
224 aa  63.5  0.000000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.397858 
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  26.43 
 
 
225 aa  63.2  0.000000002  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  30 
 
 
236 aa  62.8  0.000000002  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
BN001303  ANIA_04987  cAMP-dependent protein kinase regulatory subunit (PKA regulatory subunit) [Source:UniProtKB/Swiss-Prot;Acc:O59922]  37.76 
 
 
412 aa  62.4  0.000000003  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.599779  normal  0.51731 
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  26.09 
 
 
239 aa  62.4  0.000000003  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  27.74 
 
 
225 aa  62  0.000000003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_008146  Mmcs_4818  Crp/FNR family transcriptional regulator  29.66 
 
 
224 aa  62.4  0.000000003  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_5205  Crp/FNR family transcriptional regulator  29.66 
 
 
224 aa  62.4  0.000000003  Mycobacterium sp. JLS  Bacteria  normal  0.703662  hitchhiker  0.000819508 
 
 
-
 
NC_008705  Mkms_4904  Crp/FNR family transcriptional regulator  29.66 
 
 
224 aa  62.4  0.000000003  Mycobacterium sp. KMS  Bacteria  normal  normal  0.385516 
 
 
-
 
NC_007413  Ava_0144  cyclic nucleotide-binding domain-containing protein  30.84 
 
 
227 aa  61.6  0.000000004  Anabaena variabilis ATCC 29413  Bacteria  normal  0.993696  normal 
 
 
-
 
NC_007413  Ava_1433  cyclic nucleotide-binding domain-containing protein  33.04 
 
 
408 aa  62  0.000000004  Anabaena variabilis ATCC 29413  Bacteria  normal  0.532362  normal 
 
 
-
 
NC_009565  TBFG_11692  transcriptional regulator  28.7 
 
 
244 aa  62  0.000000004  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.476097 
 
 
-
 
NC_009565  TBFG_13707  Cpr/FNR family transcriptional regulator  28.81 
 
 
224 aa  62  0.000000004  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.0333343 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  27.74 
 
 
225 aa  62  0.000000004  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  32.65 
 
 
242 aa  61.6  0.000000005  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_014158  Tpau_3932  transcriptional regulator, Crp/Fnr family  27.97 
 
 
224 aa  61.6  0.000000005  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.571672  n/a   
 
 
-
 
NC_013093  Amir_0253  transcriptional regulator, Crp/Fnr family  29.66 
 
 
224 aa  61.6  0.000000006  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  29.13 
 
 
225 aa  60.8  0.000000009  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_2894  cyclic nucleotide-binding protein  34.78 
 
 
482 aa  60.8  0.000000009  Roseiflexus castenholzii DSM 13941  Bacteria  decreased coverage  0.00660929  normal 
 
 
-
 
NC_014151  Cfla_0719  transcriptional regulator, Crp/Fnr family  25.64 
 
 
257 aa  60.8  0.000000009  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000204419 
 
 
-
 
NC_014212  Mesil_2074  transcriptional regulator, Crp/Fnr family  28.12 
 
 
225 aa  60.5  0.00000001  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.971908 
 
 
-
 
NC_008699  Noca_1660  Crp/FNR family transcriptional regulator  25.55 
 
 
261 aa  60.1  0.00000001  Nocardioides sp. JS614  Bacteria  normal  0.74426  n/a   
 
 
-
 
NC_013037  Dfer_1108  putative transcriptional regulator, Crp/Fnr family  30.15 
 
 
1075 aa  60.1  0.00000002  Dyadobacter fermentans DSM 18053  Bacteria  decreased coverage  0.000733786  normal  0.267995 
 
 
-
 
NC_013440  Hoch_6450  putative transcriptional regulator, Crp/Fnr family  31 
 
 
253 aa  59.7  0.00000002  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_1294  cyclic nucleotide-binding: regulatory protein, Crp  28.26 
 
 
220 aa  59.7  0.00000002  Dechloromonas aromatica RCB  Bacteria  normal  0.957461  normal  0.413121 
 
 
-
 
NC_009720  Xaut_1772  cyclic nucleotide-binding protein  26.87 
 
 
161 aa  60.1  0.00000002  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0691544 
 
 
-
 
NC_011894  Mnod_4596  transcriptional regulator, Crp/Fnr family  28.79 
 
 
230 aa  59.7  0.00000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2129  Crp/Fnr family transcriptional regulator  28.24 
 
 
225 aa  59.7  0.00000002  Meiothermus ruber DSM 1279  Bacteria  normal  0.185639  normal  0.344505 
 
 
-
 
NC_002967  TDE2616  cyclic nucleotide-binding protein  32.43 
 
 
219 aa  58.9  0.00000003  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1878  cyclic nucleotide-binding protein  26.79 
 
 
275 aa  59.3  0.00000003  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.116046  n/a   
 
 
-
 
NC_014248  Aazo_1954  putative Crp/Fnr family transcriptional regulator  28.78 
 
 
141 aa  58.9  0.00000003  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0559  Crp/FNR family transcriptional regulator  29.79 
 
 
225 aa  59.3  0.00000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.338488  normal  0.42035 
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  25.85 
 
 
243 aa  59.3  0.00000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_007778  RPB_0893  Crp/FNR family transcriptional regulator  30.37 
 
 
226 aa  58.5  0.00000004  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_13268  transmembrane transport protein  30.84 
 
 
1048 aa  58.5  0.00000004  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.321047 
 
 
-
 
NC_009636  Smed_3055  cyclic nucleotide-binding protein  27.97 
 
 
151 aa  58.5  0.00000004  Sinorhizobium medicae WSM419  Bacteria  normal  0.517471  normal 
 
 
-
 
NC_008554  Sfum_1513  cyclic nucleotide-binding protein  27.97 
 
 
308 aa  58.5  0.00000004  Syntrophobacter fumaroxidans MPOB  Bacteria  hitchhiker  0.00604424  normal 
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  28.99 
 
 
229 aa  58.2  0.00000005  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1494  cyclic nucleotide-binding protein  29.41 
 
 
119 aa  58.5  0.00000005  Cyanothece sp. PCC 7425  Bacteria  hitchhiker  0.00548568  normal 
 
 
-
 
NC_010524  Lcho_4099  Crp/FNR family transcriptional regulator  30.7 
 
 
237 aa  58.2  0.00000005  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00000000655046 
 
 
-
 
NC_009972  Haur_3689  cyclic nucleotide-binding protein  30.38 
 
 
454 aa  58.2  0.00000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.120597  n/a   
 
 
-
 
NC_007413  Ava_4550  cyclic nucleotide-binding domain-containing protein  27.46 
 
 
238 aa  58.2  0.00000006  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_5025  putative transcriptional regulator, Crp/Fnr family  28.19 
 
 
1056 aa  58.2  0.00000006  Spirosoma linguale DSM 74  Bacteria  decreased coverage  0.00524189  normal 
 
 
-
 
NC_009943  Dole_2199  cyclic nucleotide-binding protein  26.57 
 
 
357 aa  57.8  0.00000007  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_5091  MscS Mechanosensitive ion channel  25.31 
 
 
637 aa  57.8  0.00000008  Cyanothece sp. PCC 7425  Bacteria  hitchhiker  0.00148956  normal  0.0183068 
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  30.61 
 
 
228 aa  57.8  0.00000008  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1005  cyclic nucleotide-binding  30.37 
 
 
226 aa  57.4  0.00000009  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.184599  normal  0.14907 
 
 
-
 
NC_009338  Mflv_4388  CRP/FNR family transcriptional regulator  29.66 
 
 
225 aa  57  0.0000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_3032  Crp family transcriptional regulator  30.5 
 
 
224 aa  56.6  0.0000001  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0461942  normal 
 
 
-
 
NC_009523  RoseRS_3166  cyclic nucleotide-binding protein  30.61 
 
 
482 aa  57  0.0000001  Roseiflexus sp. RS-1  Bacteria  decreased coverage  0.00363184  normal 
 
 
-
 
NC_011729  PCC7424_3804  MscS Mechanosensitive ion channel  37.21 
 
 
495 aa  57.4  0.0000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013440  Hoch_3345  cyclic nucleotide-binding protein  26.67 
 
 
417 aa  57  0.0000001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.254717  normal 
 
 
-
 
NC_010424  Daud_2002  cyclic nucleotide-binding protein  26.14 
 
 
641 aa  55.8  0.0000002  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  31.63 
 
 
228 aa  56.2  0.0000002  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_36130  cAMP-binding protein  26.27 
 
 
224 aa  56.6  0.0000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.758224 
 
 
-
 
NC_007778  RPB_0380  cyclic nucleotide-binding domain-containing protein  27.27 
 
 
148 aa  56.6  0.0000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_3761  putative Crp/Fnr family transcriptional regulator  29.52 
 
 
227 aa  55.8  0.0000002  'Nostoc azollae' 0708  Bacteria  normal  0.0509841  n/a   
 
 
-
 
NC_007973  Rmet_1527  cyclic nucleotide-binding domain-containing protein  29.27 
 
 
167 aa  56.6  0.0000002  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.0000128576  hitchhiker  0.00383137 
 
 
-
 
NC_013512  Sdel_0691  cyclic nucleotide-binding protein  23.26 
 
 
212 aa  55.8  0.0000002  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_0617  cyclic nucleotide-binding protein  32.32 
 
 
577 aa  56.6  0.0000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.340501  normal 
 
 
-
 
NC_010511  M446_0723  Crp/FNR family transcriptional regulator  28.21 
 
 
228 aa  56.2  0.0000002  Methylobacterium sp. 4-46  Bacteria  normal  0.362046  normal  0.190371 
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  24.62 
 
 
232 aa  56.2  0.0000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
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