More than 300 homologs were found in PanDaTox collection
for query gene MmarC5_0649 on replicon NC_009135
Organism: Methanococcus maripaludis C5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009634  Mevan_0073  nickel-dependent hydrogenase large subunit  89 
 
 
410 aa  775    Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009135  MmarC5_0649  coenzyme F420-reducing hydrogenase, alpha subunit  100 
 
 
410 aa  847    Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0627  nickel-dependent hydrogenase large subunit  51.79 
 
 
390 aa  376  1e-103  Methanococcus maripaludis C7  Archaea  normal  normal  0.931032 
 
 
-
 
NC_009135  MmarC5_0196  nickel-dependent hydrogenase, large subunit  51.53 
 
 
390 aa  374  1e-102  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009975  MmarC6_1291  coenzyme F420 hydrogenase, subunit alpha  51.53 
 
 
390 aa  373  1e-102  Methanococcus maripaludis C6  Archaea  normal  0.333817  n/a   
 
 
-
 
NC_009634  Mevan_0692  nickel-dependent hydrogenase large subunit  50.77 
 
 
390 aa  371  1e-101  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_008942  Mlab_0015  coenzyme F420-reducing hydrogenase, alpha subunit  42.01 
 
 
455 aa  365  1e-99  Methanocorpusculum labreanum Z  Archaea  normal  normal 
 
 
-
 
NC_009635  Maeo_1045  nickel-dependent hydrogenase large subunit  50.51 
 
 
385 aa  359  6e-98  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_009051  Memar_2174  nickel-dependent hydrogenase, large subunit  42.36 
 
 
455 aa  358  8e-98  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_007796  Mhun_2332  nickel-dependent hydrogenase, large subunit  41.27 
 
 
469 aa  350  3e-95  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_011832  Mpal_0084  coenzyme F420 hydrogenase, subunit alpha  41.36 
 
 
455 aa  345  1e-93  Methanosphaerula palustris E1-9c  Archaea  decreased coverage  0.0042117  normal  0.0638209 
 
 
-
 
NC_007355  Mbar_A2287  coenzyme F420 hydrogenase, subunit alpha  40.83 
 
 
456 aa  328  1.0000000000000001e-88  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.304616 
 
 
-
 
NC_007355  Mbar_A0452  coenzyme F420-reducing hydrogenase, alpha subunit  41.05 
 
 
456 aa  327  3e-88  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_009712  Mboo_0479  coenzyme F420 hydrogenase  37.81 
 
 
437 aa  294  2e-78  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.654505  normal 
 
 
-
 
NC_009712  Mboo_2023  nickel-dependent hydrogenase, large subunit  35 
 
 
438 aa  276  7e-73  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.113638 
 
 
-
 
NC_009051  Memar_1007  nickel-dependent hydrogenase, large subunit  28.63 
 
 
455 aa  161  2e-38  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_012918  GM21_3972  nickel-dependent hydrogenase large subunit  30.13 
 
 
473 aa  159  1e-37  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000529156 
 
 
-
 
NC_011146  Gbem_3884  nickel-dependent hydrogenase large subunit  29.91 
 
 
473 aa  157  3e-37  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0078  nickel-dependent hydrogenase large subunit  29.31 
 
 
474 aa  156  8e-37  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009634  Mevan_0070  nickel-dependent hydrogenase large subunit  30.52 
 
 
471 aa  155  1e-36  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009635  Maeo_0097  nickel-dependent hydrogenase large subunit  30.02 
 
 
475 aa  154  2.9999999999999998e-36  Methanococcus aeolicus Nankai-3  Archaea  normal  0.325648  n/a   
 
 
-
 
NC_009135  MmarC5_0652  F420-non-reducing hydrogenase subunit A  30.52 
 
 
471 aa  151  2e-35  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_010814  Glov_1553  nickel-dependent hydrogenase large subunit  28.41 
 
 
479 aa  150  5e-35  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_3320  nickel-dependent hydrogenase, large subunit  28.1 
 
 
473 aa  141  1.9999999999999998e-32  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013158  Huta_2102  nickel-dependent hydrogenase large subunit  28.23 
 
 
472 aa  140  3e-32  Halorhabdus utahensis DSM 12940  Archaea  normal  0.782605  n/a   
 
 
-
 
NC_009637  MmarC7_0969  nickel-dependent hydrogenase large subunit  30.4 
 
 
418 aa  140  3.9999999999999997e-32  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_007614  Nmul_A1673  nickel-dependent hydrogenase, large subunit  27.58 
 
 
493 aa  139  7e-32  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.521628  n/a   
 
 
-
 
NC_002936  DET0615  hydrogenase, group 3, VhuA subunit, putative  26.51 
 
 
479 aa  138  2e-31  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009135  MmarC5_1712  F420-non-reducing hydrogenase subunit A  29.93 
 
 
418 aa  137  3.0000000000000003e-31  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009975  MmarC6_0977  nickel-dependent hydrogenase large subunit  29.93 
 
 
418 aa  137  3.0000000000000003e-31  Methanococcus maripaludis C6  Archaea  normal  0.390644  n/a   
 
 
-
 
NC_007517  Gmet_1113  nickel-dependent hydrogenase, large subunit  27.59 
 
 
476 aa  136  6.0000000000000005e-31  Geobacter metallireducens GS-15  Bacteria  normal  0.301961  normal 
 
 
-
 
NC_002977  MCA0114  NAD-reducing hydrogenase, beta subunit  28.76 
 
 
494 aa  134  3e-30  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2791  nickel-dependent hydrogenase large subunit  27.09 
 
 
482 aa  134  3e-30  Geobacter lovleyi SZ  Bacteria  normal  0.119602  n/a   
 
 
-
 
NC_013552  DhcVS_553  nickel-dependent hydrogenase, group 3, large subunit  25.54 
 
 
479 aa  134  3e-30  Dehalococcoides sp. VS  Bacteria  normal  0.0139726  n/a   
 
 
-
 
NC_009455  DehaBAV1_0588  F420-non-reducing hydrogenase subunit A  25.97 
 
 
479 aa  134  3e-30  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.0000204108  n/a   
 
 
-
 
NC_013223  Dret_2258  nickel-dependent hydrogenase large subunit  28.36 
 
 
486 aa  132  7.999999999999999e-30  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU2718  NAD-reducing hydrogenase, beta subunit  27.01 
 
 
478 aa  132  1.0000000000000001e-29  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4661  nickel-dependent hydrogenase, large subunit  26.41 
 
 
487 aa  132  1.0000000000000001e-29  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_2716  nickel-dependent hydrogenase, large subunit  27.86 
 
 
479 aa  131  2.0000000000000002e-29  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.892044  normal 
 
 
-
 
NC_009634  Mevan_0996  nickel-dependent hydrogenase large subunit  29.69 
 
 
418 aa  130  6e-29  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_008554  Sfum_3954  nickel-dependent hydrogenase, large subunit  27.67 
 
 
449 aa  129  7.000000000000001e-29  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.644029 
 
 
-
 
NC_002939  GSU2419  nickel-dependent hydrogenase, large subunit  27.45 
 
 
473 aa  129  9.000000000000001e-29  Geobacter sulfurreducens PCA  Bacteria  normal  0.954862  n/a   
 
 
-
 
NC_008554  Sfum_2221  nickel-dependent hydrogenase, large subunit  28.75 
 
 
482 aa  129  1.0000000000000001e-28  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.794889  normal  0.78316 
 
 
-
 
NC_010424  Daud_1651  nickel-dependent hydrogenase, large subunit  28.69 
 
 
485 aa  128  2.0000000000000002e-28  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013926  Aboo_0080  nickel-dependent hydrogenase large subunit  28.54 
 
 
421 aa  126  6e-28  Aciduliprofundum boonei T469  Archaea  normal  0.303597  n/a   
 
 
-
 
NC_009523  RoseRS_3539  nickel-dependent hydrogenase, large subunit  27.07 
 
 
474 aa  126  8.000000000000001e-28  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_1122  nickel-dependent hydrogenase, large subunit  27.42 
 
 
425 aa  125  2e-27  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3537  nickel-dependent hydrogenase, large subunit  27.16 
 
 
469 aa  123  5e-27  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2476  nickel-dependent hydrogenase large subunit  26.68 
 
 
473 aa  123  5e-27  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.795621  normal  0.410999 
 
 
-
 
NC_007298  Daro_0982  nickel-dependent hydrogenase, large subunit  27.81 
 
 
487 aa  123  7e-27  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1459  nickel-dependent hydrogenase large subunit  26.94 
 
 
504 aa  122  9e-27  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.720227 
 
 
-
 
NC_008146  Mmcs_3416  nickel-dependent hydrogenase, large subunit  26.73 
 
 
430 aa  122  9e-27  Mycobacterium sp. MCS  Bacteria  normal  0.291194  n/a   
 
 
-
 
NC_008705  Mkms_3479  nickel-dependent hydrogenase, large subunit  26.73 
 
 
430 aa  122  9e-27  Mycobacterium sp. KMS  Bacteria  normal  0.441341  normal  0.0523033 
 
 
-
 
NC_007953  Bxe_C0531  putative nickel-dependent hydrogenase, large subunit  27.04 
 
 
504 aa  122  9.999999999999999e-27  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_1215  nickel-dependent hydrogenase, large subunit  28.57 
 
 
499 aa  122  9.999999999999999e-27  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.0417903 
 
 
-
 
NC_009077  Mjls_3427  nickel-dependent hydrogenase, large subunit  26.73 
 
 
430 aa  122  9.999999999999999e-27  Mycobacterium sp. JLS  Bacteria  normal  normal  0.260108 
 
 
-
 
NC_007973  Rmet_1525  nickel-dependent hydrogenase, large subunit  27.05 
 
 
488 aa  122  1.9999999999999998e-26  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00000894187  hitchhiker  0.00486844 
 
 
-
 
NC_011884  Cyan7425_2660  Coenzyme F420 hydrogenase  26.22 
 
 
433 aa  121  3e-26  Cyanothece sp. PCC 7425  Bacteria  normal  0.041142  normal 
 
 
-
 
NC_007777  Francci3_4496  nickel-dependent hydrogenase, large subunit  26.61 
 
 
430 aa  120  3e-26  Frankia sp. CcI3  Bacteria  normal  0.401222  normal 
 
 
-
 
NC_008554  Sfum_1791  hydrogen dehydrogenase  30.41 
 
 
449 aa  121  3e-26  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0095  nickel-dependent hydrogenase large subunit  26.2 
 
 
474 aa  120  4.9999999999999996e-26  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013385  Adeg_2013  nickel-dependent hydrogenase large subunit  27.02 
 
 
487 aa  120  4.9999999999999996e-26  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1019  nickel-dependent hydrogenase, large subunit  25.45 
 
 
431 aa  119  7e-26  Acidothermus cellulolyticus 11B  Bacteria  normal  hitchhiker  0.00653003 
 
 
-
 
NC_013161  Cyan8802_0092  nickel-dependent hydrogenase large subunit  25.99 
 
 
474 aa  119  9.999999999999999e-26  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.643449 
 
 
-
 
NC_011901  Tgr7_1138  nickel-dependent hydrogenase large subunit  25.68 
 
 
431 aa  119  9.999999999999999e-26  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1787  nickel-dependent hydrogenase large subunit  26.57 
 
 
481 aa  119  9.999999999999999e-26  Ammonifex degensii KC4  Bacteria  normal  0.993845  n/a   
 
 
-
 
NC_011662  Tmz1t_2250  nickel-dependent hydrogenase large subunit  24.26 
 
 
488 aa  119  9.999999999999999e-26  Thauera sp. MZ1T  Bacteria  normal  0.0169608  n/a   
 
 
-
 
NC_014165  Tbis_1858  nickel-dependent hydrogenase large subunit  29.28 
 
 
428 aa  118  1.9999999999999998e-25  Thermobispora bispora DSM 43833  Bacteria  normal  0.940457  normal 
 
 
-
 
NC_013947  Snas_3474  nickel-dependent hydrogenase large subunit  26.54 
 
 
432 aa  118  1.9999999999999998e-25  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.455292  normal 
 
 
-
 
NC_011145  AnaeK_4292  nickel-dependent hydrogenase large subunit  25.74 
 
 
494 aa  117  3.9999999999999997e-25  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009635  Maeo_1215  nickel-dependent hydrogenase large subunit  29.9 
 
 
418 aa  117  5e-25  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_010571  Oter_3680  nickel-dependent hydrogenase large subunit  26.68 
 
 
509 aa  116  6e-25  Opitutus terrae PB90-1  Bacteria  normal  0.0782936  normal  0.503756 
 
 
-
 
NC_009767  Rcas_1368  nickel-dependent hydrogenase large subunit  27.79 
 
 
475 aa  116  8.999999999999998e-25  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_4314  nickel-dependent hydrogenase large subunit  25.11 
 
 
494 aa  116  8.999999999999998e-25  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1940  hydrogen:quinone oxidoreductase  26.08 
 
 
475 aa  115  1.0000000000000001e-24  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1231  nickel-dependent hydrogenase large subunit  27.04 
 
 
458 aa  115  2.0000000000000002e-24  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3855  nickel-dependent hydrogenase, large subunit  25.87 
 
 
507 aa  115  2.0000000000000002e-24  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013158  Huta_2605  nickel-dependent hydrogenase large subunit  24.07 
 
 
439 aa  115  2.0000000000000002e-24  Halorhabdus utahensis DSM 12940  Archaea  normal  0.0537031  n/a   
 
 
-
 
NC_011666  Msil_2748  nickel-dependent hydrogenase large subunit  27.37 
 
 
488 aa  114  3e-24  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008726  Mvan_4113  nickel-dependent hydrogenase, large subunit  25.51 
 
 
489 aa  114  3e-24  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0509028  normal  0.183384 
 
 
-
 
NC_011729  PCC7424_4160  nickel-dependent hydrogenase large subunit  26.54 
 
 
474 aa  113  5e-24  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013501  Rmar_2590  nickel-dependent hydrogenase large subunit  25.9 
 
 
433 aa  113  5e-24  Rhodothermus marinus DSM 4252  Bacteria  normal  0.282401  n/a   
 
 
-
 
NC_011884  Cyan7425_4043  nickel-dependent hydrogenase large subunit  27.23 
 
 
473 aa  113  7.000000000000001e-24  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.0198059 
 
 
-
 
NC_011059  Paes_1929  nickel-dependent hydrogenase large subunit  26.12 
 
 
425 aa  112  9e-24  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_011206  Lferr_1055  nickel-dependent hydrogenase large subunit  27.02 
 
 
432 aa  112  1.0000000000000001e-23  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.620596 
 
 
-
 
NC_011761  AFE_0937  [NiFe] hydrogenase, alpha subunit, putative  27.02 
 
 
422 aa  112  1.0000000000000001e-23  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.952693  n/a   
 
 
-
 
NC_011830  Dhaf_2742  Hydrogen:quinone oxidoreductase  25.43 
 
 
518 aa  112  1.0000000000000001e-23  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000126046  n/a   
 
 
-
 
NC_006368  lpp2532  hypothetical protein  27.27 
 
 
430 aa  111  2.0000000000000002e-23  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_011060  Ppha_2499  nickel-dependent hydrogenase large subunit  26.4 
 
 
424 aa  110  5e-23  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1969  nickel-dependent hydrogenase large subunit  25.35 
 
 
514 aa  109  8.000000000000001e-23  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.668451  n/a   
 
 
-
 
NC_007604  Synpcc7942_2555  NAD-reducing hydrogenase HoxS beta subunit  25.78 
 
 
476 aa  109  9.000000000000001e-23  Synechococcus elongatus PCC 7942  Bacteria  normal  0.148056  normal 
 
 
-
 
NC_008639  Cpha266_2169  nickel-dependent hydrogenase, large subunit  27.29 
 
 
424 aa  109  9.000000000000001e-23  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1071  nickel-dependent hydrogenase large subunit  26.45 
 
 
470 aa  109  1e-22  Clostridium cellulolyticum H10  Bacteria  normal  0.018808  n/a   
 
 
-
 
NC_008576  Mmc1_0884  nickel-dependent hydrogenase, large subunit  24.71 
 
 
432 aa  108  1e-22  Magnetococcus sp. MC-1  Bacteria  normal  0.912975  normal  0.251676 
 
 
-
 
NC_011769  DvMF_0273  nickel-dependent hydrogenase large subunit  25.11 
 
 
488 aa  108  2e-22  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.328721 
 
 
-
 
NC_006369  lpl2387  hypothetical protein  27.21 
 
 
430 aa  107  3e-22  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_010581  Bind_0507  nickel-dependent hydrogenase large subunit  25.86 
 
 
429 aa  105  1e-21  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_007514  Cag_0245  hydrogenase/sulfur reductase, alpha subunit  26.5 
 
 
426 aa  104  2e-21  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.392685  n/a   
 
 
-
 
NC_008751  Dvul_1248  nickel-dependent hydrogenase, large subunit  25.8 
 
 
488 aa  104  3e-21  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.210122 
 
 
-
 
NC_010831  Cphamn1_2132  nickel-dependent hydrogenase large subunit  26.48 
 
 
425 aa  103  4e-21  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.0448433  normal  0.0283043 
 
 
-
 
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