More than 300 homologs were found in PanDaTox collection
for query gene MmarC7_0627 on replicon NC_009637
Organism: Methanococcus maripaludis C7



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009637  MmarC7_0627  nickel-dependent hydrogenase large subunit  100 
 
 
390 aa  807    Methanococcus maripaludis C7  Archaea  normal  normal  0.931032 
 
 
-
 
NC_009634  Mevan_0692  nickel-dependent hydrogenase large subunit  86.92 
 
 
390 aa  722    Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009975  MmarC6_1291  coenzyme F420 hydrogenase, subunit alpha  94.87 
 
 
390 aa  779    Methanococcus maripaludis C6  Archaea  normal  0.333817  n/a   
 
 
-
 
NC_009135  MmarC5_0196  nickel-dependent hydrogenase, large subunit  98.97 
 
 
390 aa  800    Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009635  Maeo_1045  nickel-dependent hydrogenase large subunit  70.26 
 
 
385 aa  586  1e-166  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_009135  MmarC5_0649  coenzyme F420-reducing hydrogenase, alpha subunit  51.79 
 
 
410 aa  376  1e-103  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009634  Mevan_0073  nickel-dependent hydrogenase large subunit  51.53 
 
 
410 aa  375  1e-102  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009051  Memar_2174  nickel-dependent hydrogenase, large subunit  37.7 
 
 
455 aa  264  3e-69  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_007796  Mhun_2332  nickel-dependent hydrogenase, large subunit  35.54 
 
 
469 aa  258  2e-67  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_008942  Mlab_0015  coenzyme F420-reducing hydrogenase, alpha subunit  35.76 
 
 
455 aa  255  8e-67  Methanocorpusculum labreanum Z  Archaea  normal  normal 
 
 
-
 
NC_011832  Mpal_0084  coenzyme F420 hydrogenase, subunit alpha  35.7 
 
 
455 aa  249  5e-65  Methanosphaerula palustris E1-9c  Archaea  decreased coverage  0.0042117  normal  0.0638209 
 
 
-
 
NC_007355  Mbar_A2287  coenzyme F420 hydrogenase, subunit alpha  34.33 
 
 
456 aa  233  5e-60  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.304616 
 
 
-
 
NC_007355  Mbar_A0452  coenzyme F420-reducing hydrogenase, alpha subunit  33.95 
 
 
456 aa  222  9.999999999999999e-57  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_009712  Mboo_2023  nickel-dependent hydrogenase, large subunit  32.33 
 
 
438 aa  211  2e-53  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.113638 
 
 
-
 
NC_009712  Mboo_0479  coenzyme F420 hydrogenase  33.17 
 
 
437 aa  206  7e-52  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.654505  normal 
 
 
-
 
NC_009634  Mevan_0996  nickel-dependent hydrogenase large subunit  30.3 
 
 
418 aa  145  1e-33  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0969  nickel-dependent hydrogenase large subunit  30.44 
 
 
418 aa  140  3.9999999999999997e-32  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_011661  Dtur_0078  nickel-dependent hydrogenase large subunit  27.75 
 
 
474 aa  140  4.999999999999999e-32  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009135  MmarC5_1712  F420-non-reducing hydrogenase subunit A  30.21 
 
 
418 aa  139  7e-32  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009975  MmarC6_0977  nickel-dependent hydrogenase large subunit  29.98 
 
 
418 aa  139  7.999999999999999e-32  Methanococcus maripaludis C6  Archaea  normal  0.390644  n/a   
 
 
-
 
NC_009635  Maeo_1215  nickel-dependent hydrogenase large subunit  28.78 
 
 
418 aa  134  1.9999999999999998e-30  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_009051  Memar_1007  nickel-dependent hydrogenase, large subunit  27.64 
 
 
455 aa  134  3e-30  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_009634  Mevan_0070  nickel-dependent hydrogenase large subunit  27.09 
 
 
471 aa  131  2.0000000000000002e-29  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009635  Maeo_0097  nickel-dependent hydrogenase large subunit  27.7 
 
 
475 aa  130  5.0000000000000004e-29  Methanococcus aeolicus Nankai-3  Archaea  normal  0.325648  n/a   
 
 
-
 
NC_009135  MmarC5_0652  F420-non-reducing hydrogenase subunit A  27.25 
 
 
471 aa  129  8.000000000000001e-29  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_012918  GM21_3972  nickel-dependent hydrogenase large subunit  28 
 
 
473 aa  121  1.9999999999999998e-26  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000529156 
 
 
-
 
NC_010814  Glov_1553  nickel-dependent hydrogenase large subunit  27.61 
 
 
479 aa  119  9.999999999999999e-26  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3884  nickel-dependent hydrogenase large subunit  27.21 
 
 
473 aa  117  3.9999999999999997e-25  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1113  nickel-dependent hydrogenase, large subunit  27.27 
 
 
476 aa  117  3.9999999999999997e-25  Geobacter metallireducens GS-15  Bacteria  normal  0.301961  normal 
 
 
-
 
NC_002939  GSU2718  NAD-reducing hydrogenase, beta subunit  26.54 
 
 
478 aa  114  2.0000000000000002e-24  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_1215  nickel-dependent hydrogenase, large subunit  27.74 
 
 
499 aa  113  6e-24  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.0417903 
 
 
-
 
NC_002936  DET0615  hydrogenase, group 3, VhuA subunit, putative  27.17 
 
 
479 aa  112  2.0000000000000002e-23  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_4160  nickel-dependent hydrogenase large subunit  26.25 
 
 
474 aa  111  3e-23  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013158  Huta_2102  nickel-dependent hydrogenase large subunit  25.84 
 
 
472 aa  110  4.0000000000000004e-23  Halorhabdus utahensis DSM 12940  Archaea  normal  0.782605  n/a   
 
 
-
 
NC_002977  MCA0114  NAD-reducing hydrogenase, beta subunit  26.23 
 
 
494 aa  109  7.000000000000001e-23  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2476  nickel-dependent hydrogenase large subunit  27.86 
 
 
473 aa  109  8.000000000000001e-23  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.795621  normal  0.410999 
 
 
-
 
NC_013385  Adeg_1231  nickel-dependent hydrogenase large subunit  26.76 
 
 
458 aa  107  3e-22  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_3320  nickel-dependent hydrogenase, large subunit  26.07 
 
 
473 aa  107  4e-22  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013552  DhcVS_553  nickel-dependent hydrogenase, group 3, large subunit  26.34 
 
 
479 aa  107  4e-22  Dehalococcoides sp. VS  Bacteria  normal  0.0139726  n/a   
 
 
-
 
NC_009455  DehaBAV1_0588  F420-non-reducing hydrogenase subunit A  26.12 
 
 
479 aa  107  4e-22  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.0000204108  n/a   
 
 
-
 
NC_009523  RoseRS_3539  nickel-dependent hydrogenase, large subunit  27.27 
 
 
474 aa  107  4e-22  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0095  nickel-dependent hydrogenase large subunit  25.35 
 
 
474 aa  107  5e-22  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0092  nickel-dependent hydrogenase large subunit  25.35 
 
 
474 aa  107  5e-22  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.643449 
 
 
-
 
NC_007413  Ava_4661  nickel-dependent hydrogenase, large subunit  26.23 
 
 
487 aa  106  7e-22  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A1673  nickel-dependent hydrogenase, large subunit  25.34 
 
 
493 aa  106  7e-22  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.521628  n/a   
 
 
-
 
NC_008554  Sfum_2716  nickel-dependent hydrogenase, large subunit  26.01 
 
 
479 aa  106  9e-22  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.892044  normal 
 
 
-
 
NC_013926  Aboo_0080  nickel-dependent hydrogenase large subunit  25.72 
 
 
421 aa  104  3e-21  Aciduliprofundum boonei T469  Archaea  normal  0.303597  n/a   
 
 
-
 
NC_010524  Lcho_1459  nickel-dependent hydrogenase large subunit  24.83 
 
 
504 aa  104  3e-21  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.720227 
 
 
-
 
NC_010814  Glov_2791  nickel-dependent hydrogenase large subunit  25.94 
 
 
482 aa  103  4e-21  Geobacter lovleyi SZ  Bacteria  normal  0.119602  n/a   
 
 
-
 
NC_011830  Dhaf_3270  nickel-dependent hydrogenase large subunit  26.11 
 
 
517 aa  103  4e-21  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_1929  nickel-dependent hydrogenase large subunit  24.46 
 
 
425 aa  101  2e-20  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_2555  NAD-reducing hydrogenase HoxS beta subunit  25.23 
 
 
476 aa  99.8  7e-20  Synechococcus elongatus PCC 7942  Bacteria  normal  0.148056  normal 
 
 
-
 
NC_009767  Rcas_1368  nickel-dependent hydrogenase large subunit  28.47 
 
 
475 aa  99.8  8e-20  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_1791  hydrogen dehydrogenase  25.74 
 
 
449 aa  99  1e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_1651  nickel-dependent hydrogenase, large subunit  25.47 
 
 
485 aa  97.1  4e-19  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3537  nickel-dependent hydrogenase, large subunit  32.8 
 
 
469 aa  96.7  6e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU2419  nickel-dependent hydrogenase, large subunit  25.53 
 
 
473 aa  96.3  7e-19  Geobacter sulfurreducens PCA  Bacteria  normal  0.954862  n/a   
 
 
-
 
NC_011830  Dhaf_2742  Hydrogen:quinone oxidoreductase  25.76 
 
 
518 aa  96.3  9e-19  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000126046  n/a   
 
 
-
 
NC_010424  Daud_1940  hydrogen:quinone oxidoreductase  24.51 
 
 
475 aa  94.7  2e-18  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1787  nickel-dependent hydrogenase large subunit  24.6 
 
 
481 aa  95.1  2e-18  Ammonifex degensii KC4  Bacteria  normal  0.993845  n/a   
 
 
-
 
NC_013385  Adeg_2013  nickel-dependent hydrogenase large subunit  24.76 
 
 
487 aa  95.5  2e-18  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_3416  nickel-dependent hydrogenase, large subunit  25.45 
 
 
430 aa  94  4e-18  Mycobacterium sp. MCS  Bacteria  normal  0.291194  n/a   
 
 
-
 
NC_008554  Sfum_3954  nickel-dependent hydrogenase, large subunit  25 
 
 
449 aa  94  4e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.644029 
 
 
-
 
NC_008705  Mkms_3479  nickel-dependent hydrogenase, large subunit  25.45 
 
 
430 aa  94  4e-18  Mycobacterium sp. KMS  Bacteria  normal  0.441341  normal  0.0523033 
 
 
-
 
NC_009077  Mjls_3427  nickel-dependent hydrogenase, large subunit  25.45 
 
 
430 aa  93.6  5e-18  Mycobacterium sp. JLS  Bacteria  normal  normal  0.260108 
 
 
-
 
NC_009483  Gura_1122  nickel-dependent hydrogenase, large subunit  25.76 
 
 
425 aa  93.6  5e-18  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_0884  nickel-dependent hydrogenase, large subunit  23.72 
 
 
432 aa  92.4  1e-17  Magnetococcus sp. MC-1  Bacteria  normal  0.912975  normal  0.251676 
 
 
-
 
NC_008639  Cpha266_2169  nickel-dependent hydrogenase, large subunit  26.29 
 
 
424 aa  92.4  1e-17  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_4113  nickel-dependent hydrogenase, large subunit  24.09 
 
 
489 aa  91.7  2e-17  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0509028  normal  0.183384 
 
 
-
 
NC_007908  Rfer_3855  nickel-dependent hydrogenase, large subunit  24.27 
 
 
507 aa  90.1  6e-17  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_2258  nickel-dependent hydrogenase large subunit  23.97 
 
 
486 aa  89.7  8e-17  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_2250  nickel-dependent hydrogenase large subunit  24.05 
 
 
488 aa  89.4  9e-17  Thauera sp. MZ1T  Bacteria  normal  0.0169608  n/a   
 
 
-
 
NC_007953  Bxe_C0531  putative nickel-dependent hydrogenase, large subunit  22.87 
 
 
504 aa  89  1e-16  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_1525  nickel-dependent hydrogenase, large subunit  23.23 
 
 
488 aa  88.2  2e-16  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00000894187  hitchhiker  0.00486844 
 
 
-
 
NC_008751  Dvul_1248  nickel-dependent hydrogenase, large subunit  25.91 
 
 
488 aa  88.6  2e-16  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.210122 
 
 
-
 
NC_011769  DvMF_0273  nickel-dependent hydrogenase large subunit  26.56 
 
 
488 aa  87.8  3e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.328721 
 
 
-
 
NC_011830  Dhaf_0805  nickel-dependent hydrogenase large subunit  26.43 
 
 
465 aa  87.8  3e-16  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_4496  nickel-dependent hydrogenase, large subunit  26.97 
 
 
430 aa  87.4  4e-16  Frankia sp. CcI3  Bacteria  normal  0.401222  normal 
 
 
-
 
NC_010831  Cphamn1_2132  nickel-dependent hydrogenase large subunit  23.64 
 
 
425 aa  85.5  0.000000000000001  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.0448433  normal  0.0283043 
 
 
-
 
NC_007404  Tbd_1263  hypothetical protein  25.13 
 
 
433 aa  85.9  0.000000000000001  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.321319  normal 
 
 
-
 
NC_011666  Msil_2748  nickel-dependent hydrogenase large subunit  23.15 
 
 
488 aa  85.5  0.000000000000002  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_2221  nickel-dependent hydrogenase, large subunit  23.64 
 
 
482 aa  85.1  0.000000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.794889  normal  0.78316 
 
 
-
 
NC_009441  Fjoh_3907  nickel-dependent hydrogenase, large subunit  23.53 
 
 
578 aa  85.5  0.000000000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2032  nickel-dependent hydrogenase large subunit  24.01 
 
 
567 aa  84  0.000000000000004  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0709763  n/a   
 
 
-
 
NC_010571  Oter_3680  nickel-dependent hydrogenase large subunit  26.95 
 
 
509 aa  84  0.000000000000004  Opitutus terrae PB90-1  Bacteria  normal  0.0782936  normal  0.503756 
 
 
-
 
NC_009714  CHAB381_0862  quinone-reactive Ni/Fe-hydrogenase large chain  38.53 
 
 
573 aa  84  0.000000000000005  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_4043  nickel-dependent hydrogenase large subunit  24.64 
 
 
473 aa  83.6  0.000000000000005  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.0198059 
 
 
-
 
NC_011145  AnaeK_0511  nickel-dependent hydrogenase large subunit  37.61 
 
 
577 aa  83.6  0.000000000000005  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_0506  nickel-dependent hydrogenase large subunit  37.61 
 
 
577 aa  83.6  0.000000000000005  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1019  nickel-dependent hydrogenase, large subunit  26.25 
 
 
431 aa  84  0.000000000000005  Acidothermus cellulolyticus 11B  Bacteria  normal  hitchhiker  0.00653003 
 
 
-
 
NC_013173  Dbac_1969  nickel-dependent hydrogenase large subunit  25.17 
 
 
514 aa  83.2  0.000000000000006  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.668451  n/a   
 
 
-
 
NC_007760  Adeh_0478  nickel-dependent hydrogenase, large subunit  37.61 
 
 
577 aa  83.6  0.000000000000006  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0785  nickel-dependent hydrogenase, large subunit  23.55 
 
 
560 aa  82  0.00000000000001  Geobacter sulfurreducens PCA  Bacteria  normal  0.433799  n/a   
 
 
-
 
NC_007514  Cag_0245  hydrogenase/sulfur reductase, alpha subunit  22.95 
 
 
426 aa  82.8  0.00000000000001  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.392685  n/a   
 
 
-
 
NC_011898  Ccel_1071  nickel-dependent hydrogenase large subunit  25.18 
 
 
470 aa  81.3  0.00000000000002  Clostridium cellulolyticum H10  Bacteria  normal  0.018808  n/a   
 
 
-
 
NC_009675  Anae109_0523  nickel-dependent hydrogenase large subunit  35.78 
 
 
578 aa  81.6  0.00000000000002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_2097  nickel-dependent hydrogenase large subunit  24.88 
 
 
424 aa  80.9  0.00000000000003  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1907  nickel-dependent hydrogenase, large subunit  37.61 
 
 
567 aa  80.5  0.00000000000005  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.022032 
 
 
-
 
NC_008345  Sfri_2104  nickel-dependent hydrogenase, large subunit  36.7 
 
 
567 aa  80.5  0.00000000000005  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_1914  nickel-dependent hydrogenase large subunit  35.78 
 
 
567 aa  79.7  0.00000000000007  Shewanella baltica OS185  Bacteria  normal  0.392356  n/a   
 
 
-
 
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