Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_2169 |
Symbol | |
ID | 4570770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | + |
Start bp | 2510836 |
End bp | 2512110 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639766744 |
Product | nickel-dependent hydrogenase, large subunit |
Protein accession | YP_912598 |
Protein GI | 119357954 |
COG category | [C] Energy production and conversion |
COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACTTG ACTGTTCGAT CGACATTCGC CATCTGACCC GAGTAGAAGG CCACGGAAAC ATCCTTATCA GGGTTGAAAA AGGCCAGCTT GTAGAAGCGC GCTGGGATGT GGTCGAAACT CCCCGGTTTT TCGAGGTCAT GCTAAAAGGC ATGAGCGCCG AACGGGTGCC GTTCCTCACC TCCCGCATCT GCGGCATCTG CTCGATCAGC CATGCCCTTG CGAGCATCCG GGCGCTCGAA CGGGCCATGC AGGTAACTCC CCCTCCGACC GCCGAAGCCG TGAGGCTGCT GGCCATGCAC GGCGAAACGC TCCAGAGCCA CGCGCTTCAC CTCTTCTTCC TTGCAGCACC GGATTTCGCA GGCACGCCGA GCGTGCTGCC GCTCATGGAG TCTAACCCGG AGCTCGTCAA AGCAGGCCTG GCCATCAAGG AACTCGGCAA CGAAATCAGC ACCGTCACTG CGGGCAGATG CACCCATCCG GTCAGCCTCG TTGCAGGCGG CATCAGTAAA GCACCTGACA GCAACAACCT TCAGCGGCTG CTCGGCATGA TAAGCGAACG GAAAGCCGCC CTTGTGCTTG CCTGCGATTT CTTCGCCTCG CTCGACATCC CCCGATTCGA GCGCGAAACC GAATTCATCT CGCTCTACAA CGGTGCCACC TACCCCTTCA TCGGCGGCGA TCTCTGCTCC ACCGACGGAG TCCGGGAAGA GGAGAACAAC TACCTCCGGA TGACCAACGA ATACCTCGCA GAGCCTTCCA CCTCGAAATT CACCCGATGC AGCCGGGAGT CATCGGCGGC GGGAGCTCTT GCCCGCTTCA ACAACAACAG CGAATTCCTG CACCCCGAGG CTAAAAAAGC CGCCGAACGG CTGGGACTCA GGCCAATCTC GCACAACCCG TTCATGTGCA ACATCGCGCA GCTCGTCGAG TGCGTCCACA TCCTTTACGA CGCGGAAACG CTCATCCGGA AATTGCTCGA CATGGATCTG CTGGAGATCC GCTCGGTCGT CAAACCGAAA GCCGGTTCGG CAACAGGAGC AGTCGAAGCT CCGCGCGGGA TCCTCTACCA CCACATGGAA ACCGATGAGG AAGGGCGCAT AGTAAAGGCA AACTGCATCA TTCCCACCAC GCAGAACAAC GCTAACATCC ACCACGATCT CGGCGCCCTT GCCCGGCAGG CGCTCGAAGA GGGAAAAAAC GACCAGGAGA TCGAAAAGCT CGCAACCATG CTGGTGCGGT CGTATGATCC GTGCATATCC TGCTCGGTTC ACTAA
|
Protein sequence | MKLDCSIDIR HLTRVEGHGN ILIRVEKGQL VEARWDVVET PRFFEVMLKG MSAERVPFLT SRICGICSIS HALASIRALE RAMQVTPPPT AEAVRLLAMH GETLQSHALH LFFLAAPDFA GTPSVLPLME SNPELVKAGL AIKELGNEIS TVTAGRCTHP VSLVAGGISK APDSNNLQRL LGMISERKAA LVLACDFFAS LDIPRFERET EFISLYNGAT YPFIGGDLCS TDGVREEENN YLRMTNEYLA EPSTSKFTRC SRESSAAGAL ARFNNNSEFL HPEAKKAAER LGLRPISHNP FMCNIAQLVE CVHILYDAET LIRKLLDMDL LEIRSVVKPK AGSATGAVEA PRGILYHHME TDEEGRIVKA NCIIPTTQNN ANIHHDLGAL ARQALEEGKN DQEIEKLATM LVRSYDPCIS CSVH
|
| |