Gene Cpha266_2169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_2169 
Symbol 
ID4570770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp2510836 
End bp2512110 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content59% 
IMG OID639766744 
Productnickel-dependent hydrogenase, large subunit 
Protein accessionYP_912598 
Protein GI119357954 
COG category[C] Energy production and conversion 
COG ID[COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTG ACTGTTCGAT CGACATTCGC CATCTGACCC GAGTAGAAGG CCACGGAAAC 
ATCCTTATCA GGGTTGAAAA AGGCCAGCTT GTAGAAGCGC GCTGGGATGT GGTCGAAACT
CCCCGGTTTT TCGAGGTCAT GCTAAAAGGC ATGAGCGCCG AACGGGTGCC GTTCCTCACC
TCCCGCATCT GCGGCATCTG CTCGATCAGC CATGCCCTTG CGAGCATCCG GGCGCTCGAA
CGGGCCATGC AGGTAACTCC CCCTCCGACC GCCGAAGCCG TGAGGCTGCT GGCCATGCAC
GGCGAAACGC TCCAGAGCCA CGCGCTTCAC CTCTTCTTCC TTGCAGCACC GGATTTCGCA
GGCACGCCGA GCGTGCTGCC GCTCATGGAG TCTAACCCGG AGCTCGTCAA AGCAGGCCTG
GCCATCAAGG AACTCGGCAA CGAAATCAGC ACCGTCACTG CGGGCAGATG CACCCATCCG
GTCAGCCTCG TTGCAGGCGG CATCAGTAAA GCACCTGACA GCAACAACCT TCAGCGGCTG
CTCGGCATGA TAAGCGAACG GAAAGCCGCC CTTGTGCTTG CCTGCGATTT CTTCGCCTCG
CTCGACATCC CCCGATTCGA GCGCGAAACC GAATTCATCT CGCTCTACAA CGGTGCCACC
TACCCCTTCA TCGGCGGCGA TCTCTGCTCC ACCGACGGAG TCCGGGAAGA GGAGAACAAC
TACCTCCGGA TGACCAACGA ATACCTCGCA GAGCCTTCCA CCTCGAAATT CACCCGATGC
AGCCGGGAGT CATCGGCGGC GGGAGCTCTT GCCCGCTTCA ACAACAACAG CGAATTCCTG
CACCCCGAGG CTAAAAAAGC CGCCGAACGG CTGGGACTCA GGCCAATCTC GCACAACCCG
TTCATGTGCA ACATCGCGCA GCTCGTCGAG TGCGTCCACA TCCTTTACGA CGCGGAAACG
CTCATCCGGA AATTGCTCGA CATGGATCTG CTGGAGATCC GCTCGGTCGT CAAACCGAAA
GCCGGTTCGG CAACAGGAGC AGTCGAAGCT CCGCGCGGGA TCCTCTACCA CCACATGGAA
ACCGATGAGG AAGGGCGCAT AGTAAAGGCA AACTGCATCA TTCCCACCAC GCAGAACAAC
GCTAACATCC ACCACGATCT CGGCGCCCTT GCCCGGCAGG CGCTCGAAGA GGGAAAAAAC
GACCAGGAGA TCGAAAAGCT CGCAACCATG CTGGTGCGGT CGTATGATCC GTGCATATCC
TGCTCGGTTC ACTAA
 
Protein sequence
MKLDCSIDIR HLTRVEGHGN ILIRVEKGQL VEARWDVVET PRFFEVMLKG MSAERVPFLT 
SRICGICSIS HALASIRALE RAMQVTPPPT AEAVRLLAMH GETLQSHALH LFFLAAPDFA
GTPSVLPLME SNPELVKAGL AIKELGNEIS TVTAGRCTHP VSLVAGGISK APDSNNLQRL
LGMISERKAA LVLACDFFAS LDIPRFERET EFISLYNGAT YPFIGGDLCS TDGVREEENN
YLRMTNEYLA EPSTSKFTRC SRESSAAGAL ARFNNNSEFL HPEAKKAAER LGLRPISHNP
FMCNIAQLVE CVHILYDAET LIRKLLDMDL LEIRSVVKPK AGSATGAVEA PRGILYHHME
TDEEGRIVKA NCIIPTTQNN ANIHHDLGAL ARQALEEGKN DQEIEKLATM LVRSYDPCIS
CSVH