| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1291 |
|---|
| Symbol | |
|---|
| ID | 5737436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | - |
|---|
| Start bp | 1198431 |
|---|
| End bp | 1199603 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641283786 |
|---|
| Product | coenzyme F420 hydrogenase, subunit alpha |
|---|
| Protein accession | YP_001549336 |
|---|
| Protein GI | 159905674 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR03295] coenzyme F420 hydrogenase, subunit alpha |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.333817 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAGAAC CTGTAACTAT CAGCCCTACA ACTAGACATG AAGGGCACGC TAAGCTAGTT
TTGAACGTAG ATGATGAAGG GATTGTAACC AAAGCATTTT ACCCAAATAC GACCCCTGTA
AGAGGTTTCG AAACAATGTT GCAAGGAAAA GCAGCAGCAT TCGGACCGGT TGCAGTTATG
AGAATTTGTG GTATATGTCA GGCAACCCAC GGTATTGCTT CATGTGAGGC AATCGAACAT
GCTATTGACA TGGAAATACC AAAAGACGGT ATGATATTAA GAGAATTAGT AGGTTTAGGA
AATAGGATGC ACTCGCACCC ACTACACCAC TTATTAATTG TAGATGACCT CTTAAAACCT
GAAGAAGCAG GAACCTTAAG AGTAGAAGGA ATTAAATTAA TCCAGAAAAT GAGAAAAGCT
GGACAGATGG TTGTAGATAT CACCGGTGGA GAAGGTATTC ACCCTCCAAA CTTGATTGTT
GGCGGTATGA GAACAAACAT CACCGAAAGG GCAAAAGCTA AACTCTACTA TGCTTGCAGA
GAATACGAAA AAGACTGTAA TGCAATGTTA GAAGTATTAG AAATGTTAAT GGAAAGATAC
TTGGAAGAAA TTGGAATTCC TGATTTAGGT AAACACAATC TCCCATATAT TGCTACAGAC
TCAACATTTG GTAACAGAGA TGCTATCAAC TGGAAAGATG TAACAGAAGT TACTGCACAA
AGATACTATG CAGACTTCCC AGATATTGCG CAAACTGCAA CAAACCAGAT CCCATTCTAC
AGAGGAAACC CTGCAGAAGG TGGACCTAGG GCAAGAATGA TTAAATACGG AAACTTCAAA
CCTGCTGGTG GAGCAATGGA TATTAACCTT GCGAGAGCAT TAGAAAACTT TGAAGCTGTT
AAACGATCAT TGGAACTCAT TGATGAATTA AACATTAATG GAATTACAAA AGAAGTACCT
AACTTCCACA ATGCAAAGGA AGAATTTGGA ATAGGTGTTC ACGAAGCACC AAGAGCTACC
AACACCCACA TGGCTAAAAT GGGCAAAGAT GGTAAAATCG AAAAATACAA CATCATTGCT
GCTTCAACGT GGAACTTCCC AGCTGTTGAA AAAGCTATTG AAGGTTACCA CCACAAATAT
GCGGAAGTAA TTATGAGAGC TTACGACATA TGA
|
|---|
| Protein sequence | MAEPVTISPT TRHEGHAKLV LNVDDEGIVT KAFYPNTTPV RGFETMLQGK AAAFGPVAVM
RICGICQATH GIASCEAIEH AIDMEIPKDG MILRELVGLG NRMHSHPLHH LLIVDDLLKP
EEAGTLRVEG IKLIQKMRKA GQMVVDITGG EGIHPPNLIV GGMRTNITER AKAKLYYACR
EYEKDCNAML EVLEMLMERY LEEIGIPDLG KHNLPYIATD STFGNRDAIN WKDVTEVTAQ
RYYADFPDIA QTATNQIPFY RGNPAEGGPR ARMIKYGNFK PAGGAMDINL ARALENFEAV
KRSLELIDEL NINGITKEVP NFHNAKEEFG IGVHEAPRAT NTHMAKMGKD GKIEKYNIIA
ASTWNFPAVE KAIEGYHHKY AEVIMRAYDI
|
|---|
| |