| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2023 |
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| Symbol | |
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| ID | 5411828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 2096061 |
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| End bp | 2097377 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640869265 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_001405180 |
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| Protein GI | 154151562 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
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| TIGRFAM ID | [TIGR03295] coenzyme F420 hydrogenase, subunit alpha |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.113638 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGGG TCATTTCCAT CTCGCCAACG ATACGCCATG AAGGTAAGTC GGGACTCGTC
CTGGATGTTG ACGAAAAGGG GATTGTTACC CGGGGGGACT GGGTCGGGTT GTCACCGGTC
CGGGGGATCG AGCGGTTCTG TACCGGAAAG AAGATGCACC AGGTACCAAA GATTGCCTCC
CGGACCTGCG GTATCTGCCC GGTGCCCCAT GTGCTCGCGG GCGTCGGGGC CATGGAAGCC
TCGATCGGCT GCGAGGTCCC AAAAGACGCT CTCCTCCTGC GCAGGATCAT CCATAGTGCG
TCGCGCCTCT CGGTCCATGC CCTCCACGCC TTTATGGTGC TCCCGGACCT GTATTACCCC
GGCACCGATA CCCGGATCAA CCCATACTCC CCCGAGCCCC GGGCCCGCGC CATCGCAGAC
CGGATCCAGC GGATCCGGGA GATCGGGCAG GACTGCGTGC AGATAGCGGG CGGCGAGGCG
ATCCACCCGG GCAACCCCCG GGTGGGCGGG ATGTACCGCA ATATCTCCCC GCAGGCAAAA
ACAAAACTCT TCGATCTGGC AAAAGAGGGA AATGTCCTTG CCCACGAACA CCTGGACTGC
ATGCTTGCCC TGATCCGGGA TTTTTCCCGG CGGGAGTGGG TGGAGATCGG TGGCGCCCGG
GTGCCGGTCC CAAAGAACCT CGGATACCAC AACCAGGGCT ATCTTGCCAC GGACCCGCTG
TACGGCACCT CAAGCCTTGA GGAGCACCCG TCCTTTGACC TTGCACGGTA TGCGGAAGTA
TCGCCTGAAC ACTGGTACCG GGGGCCGGGG GAGGTTACGT ACGGGGATCC CACCTATCCC
GGGGGCGGGA CGTTACCTGA GGGGACCGCG TTTGATCCCG CACGGGAGAT GTGCCCGGCC
GTGCCCATCT ATGACGGGCA GCCGGTCGAG GTCGGGGCTG CGGCACGGCT CCGGCGTTTT
TCGAATTTTG ACGAGAAAGG CACGATCGGG CAGCTCGTGG CCCGGCAGAT GGAGTGCATC
CCGGCCGTAA CCGAACTGGA GGACTGCATT GACCGGCTCA ATCCCGCAGG GGCAGTCCGT
GCGGGCACAC TTCCCCCCGG CGACGGGAAG CCGGGCTGGG CAGCAAACGA GGCCCCCCGC
GGGACACTGG TCCACATCAC CCGGGTCAAG GATCGGAAGG TCCGGTTCTT CAAGATGATC
GTTCCCACGT CATGGAACAT GCCGACCGCC GGCCTTGCGC TTGCCGGTTC GCCCTGGCAG
CTTGCCGAGT TTGTTATCCG GGGCTACGAC CCGTGCATAT CCTGTGCGTC GCACTAA
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| Protein sequence | MTRVISISPT IRHEGKSGLV LDVDEKGIVT RGDWVGLSPV RGIERFCTGK KMHQVPKIAS
RTCGICPVPH VLAGVGAMEA SIGCEVPKDA LLLRRIIHSA SRLSVHALHA FMVLPDLYYP
GTDTRINPYS PEPRARAIAD RIQRIREIGQ DCVQIAGGEA IHPGNPRVGG MYRNISPQAK
TKLFDLAKEG NVLAHEHLDC MLALIRDFSR REWVEIGGAR VPVPKNLGYH NQGYLATDPL
YGTSSLEEHP SFDLARYAEV SPEHWYRGPG EVTYGDPTYP GGGTLPEGTA FDPAREMCPA
VPIYDGQPVE VGAAARLRRF SNFDEKGTIG QLVARQMECI PAVTELEDCI DRLNPAGAVR
AGTLPPGDGK PGWAANEAPR GTLVHITRVK DRKVRFFKMI VPTSWNMPTA GLALAGSPWQ
LAEFVIRGYD PCISCASH
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