Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0452 |
Symbol | |
ID | 3624328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 550186 |
End bp | 551556 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637699345 |
Product | coenzyme F420-reducing hydrogenase, alpha subunit |
Protein accession | YP_304014 |
Protein GI | 73667999 |
COG category | [C] Energy production and conversion |
COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
TIGRFAM ID | [TIGR03295] coenzyme F420 hydrogenase, subunit alpha |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGAAAG TTGTAGAAAT CTCTCCAACC ACAAGACTTG AAGGTCACTC CAAGCTCACC CTGAAGGTAG ATGATCAGGG TATTGTTGAG CGAGGAGACT GGCTTTCTAT CACCCCGGTC AGGGGTATTG AAAAGCTCGC TATAGGTAAG ACAATGGAAC AGGTTCCGAA GATCGCTTCT CGGGTCTGCG GTATCTGTCC TATTGCCCAC ACCCTGGCAA GCACCGAAGC CATGGAGGCT TCGATCGGCT GCGAAATCCC CACGGATGCA AAGCTCCTGC GGACCATTCT CCATGCCGCG AACCGTATCC ATAGCATCGC CCTGCACAAC ATCCTGATCC TCCCGGACTT TTACATTCCT GGGACGGAAA AGAAGTTTAA CCTGTTCGCC AACGAGCAGC CTGCCAGGAG TGTTATGGCT AGAATTGTCC GCATCCGCGA GATTGCACAG ACAATTGGAG CCATCGCAGG TGGCGAGGCG ATCCATCCAT CCAATCCGAG GATCGGCGGG ATGTACTATA ATGTGAGTCC CCGGGCAAAG CAAAAAATGG CCGACCTGGC GAAAGAAGGT CTTGTTCTTG TCCACGAGCA GATGGAATTC ATGTTTGATG TCATCAGGAA CATGCAGAAC AGGGAATTTG TAGAGGTCGC AGGCAAACAG ATCCCACTTC CTAAGAAACT TGGGTATCAC AACCAGGGAG TTATGGCCAC AGCTTCGATG TACGGGTCAT CCAGTCTGGA TGATAATCCT ACATGGGATT TCACTCGTTG GAAAGAAACC CGTCCATGGG ATTGGTACAT GGGTGAGGTA ACAATCGATC TTGAGGATCC AAGCTACCCG ATCGGAGGTA CCACGAAGAT CGGCACTAAA GCCAACCCCC AGATGGAGGC CTGCACAGGT GTTCCTACCT ACGACGGACA GCCTGTTGAG GTTGGTCCGA GGGCAAGGCT TGCTACATTC AAGAACTTCG ATGAGAAGGG TACTTTTGCC CAGCACATCG CCAGGCAGAT GGAATACCCA GACTGCTGCT ACACCATACT CAGGTGCCTT GACAACCTGA ATACTTCAGG TAAGGTCCTT GCCGACCATA TTCCCCAGGG AGATGGGTCC ATGGGCTGGG CCGCGAACGA GGCTCCGCGT GGGAGTAATA TCCATCTCGC ACGGGTGAAG GACGGGAAAG TGTTGTGGTA TGATATGCTT GTGCCTACCA CCTGGAACTT CCCGACCTGC AGCCGTGCTC TGACTGGAGC GCCCTGGCAG ATTGCCGAAA TGGTCGTCCG GGCCTATGAC CCGTGCGTTT CGTGTGCAAC CCACATGATC GTGGTGAACG AGGAGGAAAA GATAGTCACC CAGAAGCTCA TGCAGTGGTG A
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Protein sequence | MTKVVEISPT TRLEGHSKLT LKVDDQGIVE RGDWLSITPV RGIEKLAIGK TMEQVPKIAS RVCGICPIAH TLASTEAMEA SIGCEIPTDA KLLRTILHAA NRIHSIALHN ILILPDFYIP GTEKKFNLFA NEQPARSVMA RIVRIREIAQ TIGAIAGGEA IHPSNPRIGG MYYNVSPRAK QKMADLAKEG LVLVHEQMEF MFDVIRNMQN REFVEVAGKQ IPLPKKLGYH NQGVMATASM YGSSSLDDNP TWDFTRWKET RPWDWYMGEV TIDLEDPSYP IGGTTKIGTK ANPQMEACTG VPTYDGQPVE VGPRARLATF KNFDEKGTFA QHIARQMEYP DCCYTILRCL DNLNTSGKVL ADHIPQGDGS MGWAANEAPR GSNIHLARVK DGKVLWYDML VPTTWNFPTC SRALTGAPWQ IAEMVVRAYD PCVSCATHMI VVNEEEKIVT QKLMQW
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