| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3884 |
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| Symbol | |
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| ID | 6780748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 4422327 |
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| End bp | 4423748 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642769879 |
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| Product | nickel-dependent hydrogenase large subunit |
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| Protein accession | YP_002140672 |
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| Protein GI | 197120245 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGATGA AGCGAACTTT GAAGATTGAC CCGGTGACCC GGATCGAGGG GCACGCCAAG
GTGTTCATCA ACCTGGACGA GGCCGGGGCG CTGGAAAGCG CGGGGCTCGT GGTGAACGAG
CTGCGCGGCT TCGAGAAGAT CCTGATCGGC ATGGAGGCGG ACCGGATGCC GCACGTGACG
GCGCGCATCT GCGGGGTCTG CCCCACCGCG CATCACTTGG CCGCCTGCAA CGCCCTGGAC
CACGCGGCAG GGGTCACGCC CCCCCCCGCC GCGCTCCTTT TGCGGGAGCT GATGTATCTC
GGGCACATCA TCCATTCGCA CTCGCTTTCC ATCTTCGTGC TGCAGGGGCC GGACCTGGTG
CTGGGGCTCG ACGCGGACCC GGCGATCCGG AACATCGTCG GCATCGTGCA GGCGAACCCG
GAGCTTGCCA AGCTCGCCCT TGGCTTAAGG AGCATCGGCC AGAAGATCAA CGAGATGGTG
GGGGGGAGGG GGACCCACCC GGTGACCTCC GTTGCCGGCG GCATCGCCTT CGTGCTCGAC
AAGGAGAAGC TAAAGGCGCT CAAGGAGTGG GTGGACGAGG CGCGCGGGGT GCTGCCGCAG
GTGGTTCCGG CCGTAAAGGG ACTCCTGATG CGGGCCCTGG AAAAGCACCC GGAGATGGGG
GAAAAGTGGA TCGTCTCCAG CTTCGGCATG GGAACGGTGC AGGATGAAGC GGTCTCCCTG
ATCTCGGGAA AGCTTCGCGT CATCGACGAG ACCGGCGCCA CCCGCCTGGA GTTCGGCATC
GAGGAGTATG ACCGTTACCT GCGCGAGTCG GTGGTGGATT GGTCCTACAT GAAGAAGGTG
CAGGTGGAGC TGGACGGCGA GCTGCACGAC TACCGGGTGG GGCCCATGGC CCGCATGAAC
GCGGCGCGCC GTTTCGGGAC CGAAATGGCC GACGCCGAGT ACGCCGAGTT CGCCCGCCTG
GGGGGGGCGC CCTGCCACGC CACCGTCTTC CAGACCTACG CCAAGCTGAT CGAAATCGTC
TGGGCCATCG AGCGCGCGGG AGAGATCCTG CGCGACAAGG CGATCCGCGG GGAGACCCGG
GTCCCGGTCC GCTTCCAGGG GGGAAGGGGG GTGGGGCACG TCGAGGCGCC GCGCGGCACG
CTGATCCACG ACTACCAGAT CGACGAGCGC GGGATCGTGC GGGCGGCGAA CCTGATCGTC
GCGACCCAGC AGAACTACTC GCTCATCAAC CGTTCCATCG AGCAGTCCGC CCAGTCCCAC
GTGATCGACC GCCCCGACGA CCGGGCGCTC ATGAATGCCG TCGAGTTCAG CATCCGCTGC
TACGACCCCT GCCTTTCCTG CGCCACCCAT GCTTTAGGGC GGATGCCGCT GGAGGTAGCG
GTCAGGCGGG GCGCGGAGAC GGTCAAGACC CTTTGGAGGT AA
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| Protein sequence | MPMKRTLKID PVTRIEGHAK VFINLDEAGA LESAGLVVNE LRGFEKILIG MEADRMPHVT
ARICGVCPTA HHLAACNALD HAAGVTPPPA ALLLRELMYL GHIIHSHSLS IFVLQGPDLV
LGLDADPAIR NIVGIVQANP ELAKLALGLR SIGQKINEMV GGRGTHPVTS VAGGIAFVLD
KEKLKALKEW VDEARGVLPQ VVPAVKGLLM RALEKHPEMG EKWIVSSFGM GTVQDEAVSL
ISGKLRVIDE TGATRLEFGI EEYDRYLRES VVDWSYMKKV QVELDGELHD YRVGPMARMN
AARRFGTEMA DAEYAEFARL GGAPCHATVF QTYAKLIEIV WAIERAGEIL RDKAIRGETR
VPVRFQGGRG VGHVEAPRGT LIHDYQIDER GIVRAANLIV ATQQNYSLIN RSIEQSAQSH
VIDRPDDRAL MNAVEFSIRC YDPCLSCATH ALGRMPLEVA VRRGAETVKT LWR
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