| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0588 |
|---|
| Symbol | |
|---|
| ID | 5131835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | + |
|---|
| Start bp | 577848 |
|---|
| End bp | 579287 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640529491 |
|---|
| Product | F420-non-reducing hydrogenase subunit A |
|---|
| Protein accession | YP_001214051 |
|---|
| Protein GI | 147669233 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000204108 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAGA TTACAATTCA ACCGGTTACC AGGATCGAAG GTGCCGCTAA GGTTGTTATA
AGCCTTGATG ATAGTGGTAA TGTATCTGAT GCCCGCATGC ATATTATAGA GCTTCGCGGT
TTTGAAAAAT TCTGTATAGG GCGTCCGGTA GAGGAAATGC CCCGTATTAC CCCGCGTATC
TGCGGTGTTT GCCCGCTTTC CCACCATCTG TGTTCTGCTA AGGCCTGTGA CAGTGTTTTC
GGGGTTACCC CGCCGTCTGC CGGCCGCAAA CTGCGTGAGC TGGCTAATGC CACCGCCTAT
CTGGAAGAAC ACATTCTCCA CTTCTTCTTT TTAGCTGGAG CAGACCTTGT AATGGGTCCG
GGTGAAAACT ACTCCATGCG CAATGTTTTT GGTATAGCCC AGAAGATGCC TGAACTGGGG
CAGAAGGTTA TTCGTTCGCG CCATCTGGCC TCAAAAATGC TTGATTACCT GCTGGGAAAA
GATATCCACC CTGTAGCGGC TGTGGCTGGC GGATTTTCAA AACCGCTTAC TGAAACTGAA
CGTGAAAAAA TGATGGAAAT GGCTAAAGAG CTGTTGGAGT TCTCCAAGTT CTCCATAGCT
TATGCCAAAG AAAATCTTTT CAGCAAATAT GAAGGCCTGA TTAAGGAAAT TGGTGTTATC
AAGACCGGCT TTTTGGGTAC GGTGGATAAA AATGGTGCTC TAAACCAGTA TGACGGCAAT
CTTCGCCTTA TGCGTCCTGA CGGCAAGTTT ACCGAATTTG CCCCAAAAGA TTACCTTGAT
CACATTACCG AACGGGTAGA AGACTGGAGT TACGCCAAAT TCCCTTATGC CAAGGAGCTG
GGTGAGTTCA ATATGGATTT GGACAATCCC TCCGGCATTT TCCGGGTAAA TACTCTGGCC
CGTATAAATG CCTGTGACCG GATTGCTACC CCTCTGGCTC AAAAAGAACT GGAAGAATTT
AGGGCTAAAT TCGGCCGTCC TGCCCAGCAA TCACTCCTTT TCAACTGGGC ACGCCTGATA
GAGCTTTTAT ACAATGCAGA AAGAGTGATA GAGCTTCTTT CTGATCCCGA AATTACCAGC
ACCAATACCC GCGTACCGGT AACTCCCAAA GCCGGTCGAG GAGTGGGTTG TGTAGAAGCC
CCCCGCGGCA CCCTTATCCA CGACTATACT ACGGACGAAA ATGGTCTGGT TACCGATGCC
AATCTGGTGG TAGCTACTGT TATGAACAAT GCTGCTATAA ACATGTCCGT AAAACAAGCC
GCCCAAACTC TTATCAAGGG TGGCAAATAC AACGAAACTA TTTTAGATGA AATTGAAATG
GTTATACGGG CTTATGACCC TTGCTTGTCC TGCTCTACTC ACGAGCTTAA CGGCAAAGTA
GCGGTCAGGC TGGATATAGT TGATGCAAAC GGCCAGCTGG TCCAGACTTA CTCTAACTAA
|
|---|
| Protein sequence | MKQITIQPVT RIEGAAKVVI SLDDSGNVSD ARMHIIELRG FEKFCIGRPV EEMPRITPRI
CGVCPLSHHL CSAKACDSVF GVTPPSAGRK LRELANATAY LEEHILHFFF LAGADLVMGP
GENYSMRNVF GIAQKMPELG QKVIRSRHLA SKMLDYLLGK DIHPVAAVAG GFSKPLTETE
REKMMEMAKE LLEFSKFSIA YAKENLFSKY EGLIKEIGVI KTGFLGTVDK NGALNQYDGN
LRLMRPDGKF TEFAPKDYLD HITERVEDWS YAKFPYAKEL GEFNMDLDNP SGIFRVNTLA
RINACDRIAT PLAQKELEEF RAKFGRPAQQ SLLFNWARLI ELLYNAERVI ELLSDPEITS
TNTRVPVTPK AGRGVGCVEA PRGTLIHDYT TDENGLVTDA NLVVATVMNN AAINMSVKQA
AQTLIKGGKY NETILDEIEM VIRAYDPCLS CSTHELNGKV AVRLDIVDAN GQLVQTYSN
|
|---|
| |