| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1248 |
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| Symbol | |
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| ID | 4664732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 1526672 |
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| End bp | 1528138 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639819479 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_966694 |
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| Protein GI | 120602294 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.210122 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGAT GCACTCCCAA GGCCGCACCC GCCGGGGCCA CCGGCAGGAC GACCATCGCC
ATCGACCCGG TAACCCGAAT CGAAGGCCAC CTCAAAGCAG AGGTCGTCGT CGAGAACGGT
AAGGTCGTCG ACGCCCGTCT CTCGGGCGGC ATGTACCGTG GTTTCGAGAC CATCCTGCGC
GGGCGCGACC CGCGCGACGC TTCGCAGATC GTACAGCGCA TCTGCGGCGT GTGCCCCACT
GCGCACTCCA CCGCCTCCGT CCTCGCACTC GACGAGGCCT TCGGCGCAAA GGTGCCCAAC
AACGGGCGCA TCACGCGTAA CCTCATCTTC GGTGCCAACT ACCTGCAGTC GCACATCCTG
CACTTCTACC ACCTCTCCGC GCAGGACTTC GTGCAGGGCC CGGATACGGC TCCTTTCGTT
CCGCGCTTCC CCAAGTCGGA CCTGCGCCTT TCGAAGGAAC TGAACAAGGC CGGTGTCGAC
CAGTACATCG AAGCCCTCGA AGTTCGTCGC ATCTGCCACG AGATGGTCGC CCTCTTCGGT
GGCCGTATGC CTCACGTACA GGGGCAGGTC GTCGGTGGTG CCACCGAAAT CCCCACCAAG
GAGAAGCTGG TCGAATACGC TGCCCGCTTC AAGAAGGTGC GCGATTTCGT TGAGCAGAAG
TACGTGCCCG TGGTGTACAC CATCGGCAGC AAGTACAAGG ACATGTTCAA GGTCGGCCAG
GGCTTCAAGG CTGCGCTCTG CGTGGGCGCC TTCCCGCTCG ACAACAGCGG CAAGAAGCAC
CTGTTCATGC CCGGCGTGTA CGCCAAGGGC AAGGACATGC CTTTCGATCC CTCGAAGATC
AAGGAATACG TCAAGTACTC CTGGTTCGCT GAAGAGACGA CCGGCCTCAA TTACAAGGAA
GGCAAGACCA TTCCTGCCCC TGACAAGGCC GGTGCGTACA GCTTCGTCAA GGCTCCCCGC
TACGACGGTC TGTCTCTCGA AGTGGGCCCG CTGGCACGCA TGTGGGTCAA CAACCCCGAG
CTTTCGCCCG TGGGTAAGAA GCTGCTGAAG GACCTGTTCG GCATCTCCGC CAAGAAGTTC
CGCGACCTTG GTGAAGAAGC GGCCTTCTCG CTGATGGGCC GCCACGTGGC CCGCGCCGAA
GAGACCTACT ACATGCTTGG CGCCATCGAA GGCTGGCTCA AGGAAATCAA GGCTGGCGAA
GATACCGTCG TCATGCCCGC AGTTCCCGCC TCTGCCGAAG GCACCGGCTT CACCGAAGCT
CCGCGCGGCT CTCTGCTGCA CTACGTGAAG GTGAAGGACT CGAAGATCGA CAACTACCAG
ATCGTCTCCG CATCGCTGTG GAACTGCAAC CCGCGCGACG ATATGGGACA GCGTGGTGCC
GTCGAGGAAG CCCTCATCGG CATCCCCGTC GACGACATCC AGAACCCGGT GAACGTGGCG
CGTCTCATAC GCGCCTTCGA CCCGTGA
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| Protein sequence | MSGCTPKAAP AGATGRTTIA IDPVTRIEGH LKAEVVVENG KVVDARLSGG MYRGFETILR
GRDPRDASQI VQRICGVCPT AHSTASVLAL DEAFGAKVPN NGRITRNLIF GANYLQSHIL
HFYHLSAQDF VQGPDTAPFV PRFPKSDLRL SKELNKAGVD QYIEALEVRR ICHEMVALFG
GRMPHVQGQV VGGATEIPTK EKLVEYAARF KKVRDFVEQK YVPVVYTIGS KYKDMFKVGQ
GFKAALCVGA FPLDNSGKKH LFMPGVYAKG KDMPFDPSKI KEYVKYSWFA EETTGLNYKE
GKTIPAPDKA GAYSFVKAPR YDGLSLEVGP LARMWVNNPE LSPVGKKLLK DLFGISAKKF
RDLGEEAAFS LMGRHVARAE ETYYMLGAIE GWLKEIKAGE DTVVMPAVPA SAEGTGFTEA
PRGSLLHYVK VKDSKIDNYQ IVSASLWNCN PRDDMGQRGA VEEALIGIPV DDIQNPVNVA
RLIRAFDP
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