| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0884 |
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| Symbol | |
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| ID | 4483377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1081189 |
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| End bp | 1082487 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639721633 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_864809 |
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| Protein GI | 117924192 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.912975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.251676 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACCA TTACCATTGA TCATCTCTAC CGGGTTGAGG GACATGGGGG TATTACGGTC
GCGGTCAATG AGGAGGGGAT TCAATCCTGC CAGATGAGCA TCTTTGAAGG GGCGCGTTTT
TACGAGCTGC TGCTCAAGGG TAAATTGGCG AGGGATGCCC CGGGTATCGT CTGTCGGGTC
TGCTCAATCT GTTCGGCGGG TCACACTCTA GCCAGTGTCA TGGCATTAGA GAGCGCCTTA
GGGATTCATG TGAGTGACAC GGTGCAGGGG TTTCGCACCC TGCTCAACCT GGGGCAGTTT
ATTGAGAGCC ACGCCCTGCA TCTGTTTGCT TTGGCCGCAC CGGACTATCT GGGGAATGCT
TCGATTTTGC AGATGGCGAG TCACTTTCCC GAACAGGTGC AGAAGGGGTT AGAGATTAAA
CGGGTTGGCA ATCTGGTGCA GGAGGTGGTT GGCGGGCGGG CCATTCACCC GGTTAATGTG
ATTGTGGGCG GATTGGGGCG GCGTCCTGCT CGGCAGGCGA TGCAGACGCT CTTGCAGGAT
TTGCAGAACG CCTTGGATTT GGCCCTCTCG TTGCGCGGCT TTGTGGCGTC GTTGCAAAAT
CCGGAGATGG GTTTGCAGCC GCCCATTCTG GTGGCATTAC GGGCTAGTGG GGCGCGCTAT
GGGCTTACCG GTACCCATTT GGCCGCCAGC GGCCATGAGG ATATTCCCGT GGCGCACTTT
TACCAGCGGG TTAACGAAAA GGTGGTGCGT CACTCTACCG CCAAGCAGTC TACCTATGCC
AAGAAGCCCT TTATGGTGGG GGCGTTGGCG CGGATGGTTC ATAATGGTGA GCGATTAACG
GGCGAGGCGG CACAACTGCG GGAGGCGCTG CTGCCTGCCC AACCGACGAC GTTGCACAAC
AACGCGGCGC AGTTTGTGGA GTTGGTGTGG GCCTTGGAGG AGGCGGTTGC GCTGTGTGAA
GCCTTGCAGG AGGGGCCTGC TTTGATCCCC CCCATGACCA CCATGGGCTT TGAGGGTGAG
CAGATGGGTT TGGCCGCGTT AGAGGTGCCC CGTGGCACCC TGTATCATCT CTATGGGGTC
AATGGGGAGG GGGTGTTGAC CCAGGCCGAT ATTATTACGC CCACGGCGCA GAACCTCGCC
CATGTGGAGC GGGATTTTGC CCATGGGGTG GGATACTGGC TGGAGCAGCC CCAGCGCCAG
CAGGAGCAGT TGCGTTTGTA TTTGGAGATG ATTGCCCGTG CCTATGACCC TTGTATCTCC
TGTTCGACCC ACTTGGTGGA TTTAACGGTG CAGGTGTGA
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| Protein sequence | METITIDHLY RVEGHGGITV AVNEEGIQSC QMSIFEGARF YELLLKGKLA RDAPGIVCRV
CSICSAGHTL ASVMALESAL GIHVSDTVQG FRTLLNLGQF IESHALHLFA LAAPDYLGNA
SILQMASHFP EQVQKGLEIK RVGNLVQEVV GGRAIHPVNV IVGGLGRRPA RQAMQTLLQD
LQNALDLALS LRGFVASLQN PEMGLQPPIL VALRASGARY GLTGTHLAAS GHEDIPVAHF
YQRVNEKVVR HSTAKQSTYA KKPFMVGALA RMVHNGERLT GEAAQLREAL LPAQPTTLHN
NAAQFVELVW ALEEAVALCE ALQEGPALIP PMTTMGFEGE QMGLAALEVP RGTLYHLYGV
NGEGVLTQAD IITPTAQNLA HVERDFAHGV GYWLEQPQRQ QEQLRLYLEM IARAYDPCIS
CSTHLVDLTV QV
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