Gene MmarC7_0969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_0969 
Symbol 
ID5329626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp928629 
End bp929885 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content40% 
IMG OID640793505 
Productnickel-dependent hydrogenase large subunit 
Protein accessionYP_001330187 
Protein GI150402893 
COG category[C] Energy production and conversion 
COG ID[COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAAGG TTACTATCGA ACCTCTATCC CGTTTAGAAG GGCACGGTAA GGTTTCAATA 
ACCTTAGACG ATTCGGGAAA ACCAACAGAT GTAAAATTAC ATATTACTGC CCTTAGAGGT
TTCGAACAGT TTGTTATAGG TAGGCCTGCA GAGGAAGTAC CAAGAATAGT ACCAAGAATT
TGTGGAATCT GTCAGACTCC GCACCACTTG GCAAGTGTTA AAGCAGTAGA TGCTGCATGG
GGCGCAGAAA TACCAAGCGC AGCAGGAAAA TTAAGAGAAT TAATGCACCT TGGAAACATG
ATGCACTCCC ACGCATTACA CTTCTATTAC TTGGCAGCTC CTGATTTTGT ACTCGGTCCA
GATTCAGATC CTGCAGCTAG AAACATTATT GGAGTTATCG GTGCAGCTCC TGAAGTTGCT
AAAAAAGCAA TTGCAATGAG AAGAGTTGGC CAATCAATTG TTGAAACAAT TGGTGGTAGA
GCAATTCACC CTGTTACAGG AGTTCCTGGT GGGGTATCCA AAGCATTGAG TGAAGAAAAA
AGAGACGAAT TATTAAAAGA AATTGACGAA ATGATTGCAT TTGGTCAAGA AGGTGTCGCT
CTTATCAAAG CACTCAATGA ACAATACATG GATCTTGCAA AAACACTCGG TGTAATCGAT
ACTTGGTATT TAGGTTTAGT AAAAGATGGT AAACATAATT TCTACGGAGA CACGTTAAGA
TTCATGTCCC CTGATGGAAA ACAAATAACT GACTTTAAAC CTTCAGAATA TTTAGATAAC
ATCGGTGAAC ACGTTGTAGA ACACAACTAC GTTAAATATC CATACAACAA AAAAGTTGGA
TATCCAGAAG GGCTCTACAG AGTAGGACCA TTAGGAATGA TTAACGTATG TGACTCAATG
CCTACACCTC TTGCCGAAGA AGCTAGAAAA GATTTCGCAG ACACTTTCGG AAAACCAGCA
AACCAATCAT TAGCATACAA CCATGCAAGA TTGATCGAGT TACTCGGTTC ATGCGAAAGA
GTCAAGGAAC TTTTAGAAGA TTCCGAAATA ACTTCAACAG ATATTAAGGC AGAAGTTGAA
CCTAAAGCAG GAAATGGTGT TGGTGCGATT TACGCTCCAA GAGGTACATT AATCCACAAT
TACGAAACGG ATGATAAAGG AATTGTTGTA AAAGCAAATA TGATTGTAGC TACGACACAC
AATGTACCTA CCATGGAAAA AGCTATCCAA CAAGCTGCTG AAGTGATCTT CAAATAA
 
Protein sequence
MGKVTIEPLS RLEGHGKVSI TLDDSGKPTD VKLHITALRG FEQFVIGRPA EEVPRIVPRI 
CGICQTPHHL ASVKAVDAAW GAEIPSAAGK LRELMHLGNM MHSHALHFYY LAAPDFVLGP
DSDPAARNII GVIGAAPEVA KKAIAMRRVG QSIVETIGGR AIHPVTGVPG GVSKALSEEK
RDELLKEIDE MIAFGQEGVA LIKALNEQYM DLAKTLGVID TWYLGLVKDG KHNFYGDTLR
FMSPDGKQIT DFKPSEYLDN IGEHVVEHNY VKYPYNKKVG YPEGLYRVGP LGMINVCDSM
PTPLAEEARK DFADTFGKPA NQSLAYNHAR LIELLGSCER VKELLEDSEI TSTDIKAEVE
PKAGNGVGAI YAPRGTLIHN YETDDKGIVV KANMIVATTH NVPTMEKAIQ QAAEVIFK