| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0196 |
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| Symbol | |
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| ID | 4928050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | - |
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| Start bp | 164629 |
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| End bp | 165801 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640165695 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_001096727 |
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| Protein GI | 134045241 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
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| TIGRFAM ID | [TIGR03295] coenzyme F420 hydrogenase, subunit alpha |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAGAAC CTGTAACTAT CAGCCCTACA ACTAGACATG AAGGGCATGC TAAGCTAGTT
TTGAACGTAG ATGATGAAGG GATTGTAACT AAGGCATTTT ATCCAAATAC GACCCCTGTA
AGAGGTTTCG AAACAATGTT GCAAGGAAAA CCTGCAGCAT TCGGCCCTAT TGCAGTTATG
AGAATTTGTG GTATATGTCA GGCAACCCAC GGTATTGCTT CATGTGAGGC AATCGAACAC
GCTATTGACA TGGAAATACC AAAAGACGGT ATGATATTAA GAGAATTAGT AGGTTTAGGA
AATAGGATGC ATTCGCACCC ATTACACCAC TTATTAATTG TAGATGACCT TTTAAAACCT
GAAGAAGCAG GAACTTTAAG AGTAGAAGGA ATTAAATTAA TCCAGAGAAT GAGAAAAGCT
GGACAGATGC TTGTAGATGT TGCCGGTGGA GAAGGAATTC ACCCTCCAAA CTTAATGGTT
GGTGGAATGA GAACAAACAT CACCGAAAGG GCAAAAGCTA AACTCTACTA TGCTTGCAGA
GAATATGAAA AAGACTGTAA TGCGATGTTA GAAGTATTAG AAATGTTAAT GGAAAGATAC
TTGGAAGAAA TTGGAATTCC TGATTTAGGT AAACATGATC TCCCATATAT TGCTTCAGAC
ACAACCTTTG GTAACAGAGA TGCTATCAAC TTTAAAGATA TAACAGAAGT TACTGCACAA
AGATACTATG CAGACTTCCC AGATATTGCA CAAACCGCAA CAAACCAGAT CCCATTCTAC
AGGGGAAACC CTGCAGAAGG TGGACCTAGA GCAAGAATGA TTAAATACGG AAACTTCAAA
TCTGCCGGTG GAGCAATGGA CATTAACCTT GCGAGAGCGA TGGAAAACTT TGAAGCTGTT
AAACGATCAT TGGAACTTAT TGATGAATTA AACATTAACG GAACTACAAG AGAAATACCT
AACTTCAGTA ATGCAAAAGA AGAATACGGT ATAGGTGTTC ACGAAGCACC AAGGGCCATC
AACACCCACA TGGCTAAAAT GGGTAAAGAT GGTAAAATCG AAAAATACAA TATCATTGCT
GCTTCAACGT GGAACTTCCC AGCTGTTGAA AAAGCTATTG AAGGTTACCA CCATCAATAT
GCGGAAGTAA TTATGAGAGC TTACGACATA TGA
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| Protein sequence | MAEPVTISPT TRHEGHAKLV LNVDDEGIVT KAFYPNTTPV RGFETMLQGK PAAFGPIAVM
RICGICQATH GIASCEAIEH AIDMEIPKDG MILRELVGLG NRMHSHPLHH LLIVDDLLKP
EEAGTLRVEG IKLIQRMRKA GQMLVDVAGG EGIHPPNLMV GGMRTNITER AKAKLYYACR
EYEKDCNAML EVLEMLMERY LEEIGIPDLG KHDLPYIASD TTFGNRDAIN FKDITEVTAQ
RYYADFPDIA QTATNQIPFY RGNPAEGGPR ARMIKYGNFK SAGGAMDINL ARAMENFEAV
KRSLELIDEL NINGTTREIP NFSNAKEEYG IGVHEAPRAI NTHMAKMGKD GKIEKYNIIA
ASTWNFPAVE KAIEGYHHQY AEVIMRAYDI
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