| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_553 |
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| Symbol | vhuA |
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| ID | 8657492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | + |
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| Start bp | 523726 |
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| End bp | 525165 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | |
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| Product | nickel-dependent hydrogenase, group 3, large subunit |
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| Protein accession | YP_003330033 |
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| Protein GI | 270307975 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0139726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAGA TTACAATACA GCCGGTTACC AGAATTGAAG GTGCTGCTAA GGTTGTTATA
AATCTTGATA ATAGCGGCAA CGTATCTGAT GCCCGCATGC ATATTATAGA GCTGCGCGGT
TTTGAAAAAT TTTGTATAGG GCGGCCTGTA GAAGAAATGC CCCGTATTAC CCCGCGTATC
TGCGGCGTTT GTCCGCTTTC CCATCATCTG TGTTCCGCTA AGGCTTGTGA CAACGTCTTC
GGTGTTACCC CGCCGTCTGC TGGCCGCAAA CTGCGTGAAC TGGCTAATGC CGCTGCTTAT
CTGGAAGAGC ACATCCTCCA TTTCTTCTTT TTAGCTGGAG CTGACCTTGT GATGGGTCCG
GGTGAAAACT ACTCTATGCG CAATGTTTTT GGTATAGCCC AGAAGATGCC TGAACTGGGC
CAGAAGGTTA TACGCTCACG TCATCTGGCA TCAAAGATGC TGGATTATCT TTTGGGAAAA
GATATCCACC CTGTAGCGGC TGTAGCCGGA GGGTTCTCAA AACCGCTTAC GGAAACTGAA
CGTGAAAAAA TGATGGAAAT GGCTAAAGAA CTGTTGGAGT TCTCCAAGTT TTCCATAGCA
TATGCCAAAG AAAATCTTTT CAGTAAATAT GAAAGCCTTA TTAAAGAAAT TGGCGTTATC
AAGACCGGCT TTTTAGGCAC TGTAGATAAA AACGGTGCTT TAAACCAATA TGACGGCAAT
CTTCGTCTTA TGCGTCCTGA CGGCAAGTTT ACCGAATTTT CCCCCAAGGA TTACCTTGAC
CATATTACTG AGCGGGTAGA AGACTGGAGT TATGCCAAAT TCCCGTATGC CAAGGAACTC
GGTGAGTTTA ATATGGATTT AGACAATCCC TCCGGTATTT TGAGGGTAAA CACTCTGGCC
CGTATAAATG TCTGTGACCG TATTGCTACG CCCTTGGCTC AAAAGGAACT GGAAGAATTC
CGCGCTAAAT TCGGCCGTCC TGCCCAGCAG TCACTTCTTT TCAATTGGGC ACGCTTGATA
GAGCTTTTAT ACAATGCTGA AAGGGTTATT GAGCTTCTTT CTGACCCCGA AATTACCAGC
ACCAACACTC GTGTACCGGT AACTCCCAAA GCCGGCCGGG GAGTGGGTTG CATAGAAGCC
CCCCGCGGCA CCCTTATTCA TGACTATACT ACAGATGATA ATGGTTTAGT TACTGATGCC
AATCTGGTGG TTGCCACCGT CTTTAATAAT GCTGCTATAA ATATGTCCGT GAAACAAGCT
GCCCAAACTC TTATAAAGGG TGGTAAGTAT GATGAAACCA TTTTGGACGA AATAGAAATG
GTTATACGGG CTTATGACCC CTGCTTGTCC TGCTCTACCC ACGAGCTTAA CGGCAAAGTA
GCGGTCAGGC TGGATATAGT TGACGCAAGC GGACAGCTAG CCCAGACTTA CTCTAACTAA
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| Protein sequence | MKQITIQPVT RIEGAAKVVI NLDNSGNVSD ARMHIIELRG FEKFCIGRPV EEMPRITPRI
CGVCPLSHHL CSAKACDNVF GVTPPSAGRK LRELANAAAY LEEHILHFFF LAGADLVMGP
GENYSMRNVF GIAQKMPELG QKVIRSRHLA SKMLDYLLGK DIHPVAAVAG GFSKPLTETE
REKMMEMAKE LLEFSKFSIA YAKENLFSKY ESLIKEIGVI KTGFLGTVDK NGALNQYDGN
LRLMRPDGKF TEFSPKDYLD HITERVEDWS YAKFPYAKEL GEFNMDLDNP SGILRVNTLA
RINVCDRIAT PLAQKELEEF RAKFGRPAQQ SLLFNWARLI ELLYNAERVI ELLSDPEITS
TNTRVPVTPK AGRGVGCIEA PRGTLIHDYT TDDNGLVTDA NLVVATVFNN AAINMSVKQA
AQTLIKGGKY DETILDEIEM VIRAYDPCLS CSTHELNGKV AVRLDIVDAS GQLAQTYSN
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