| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_0996 |
|---|
| Symbol | |
|---|
| ID | 5325723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus vannielii SB |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009634 |
|---|
| Strand | - |
|---|
| Start bp | 1011195 |
|---|
| End bp | 1012451 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640786672 |
|---|
| Product | nickel-dependent hydrogenase large subunit |
|---|
| Protein accession | YP_001323511 |
|---|
| Protein GI | 150399744 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTAAGG TTACAATCGA ACCTCTAACC CGTTTAGAAG GGCACGGTAA GGTTACTATA
ACCTTAGACG ATTCCGGAAA ACCAACGGAT GTAAAGTTAA ACATTACTGC CCTTAGAGGT
TTCGAGCAAT TCGTTGTAGG AAGACCTGCA GAGGAAGTAC CAAGGATTGT TCCAAGAATT
TGTGGAATTT GTCAGACGGC TCACCACTTA GCGAGTGTTA AAGCAGTAGA TGCAGCGTGG
GGGGCACAAA TCCCAATCGC AGCGGAAAAA TTGAGAGAAT TAATGCACTT GGGTAACATG
ATTCACTCAC ACGCTTTACA CTTTTACTAC TTGGCAGCTC CTGACTTTGT ACTTGGCCCC
GATGCAGACC CTGCAGTAAG AAATATTATT GGAGTTATTG GCGCAGCTCC AGAAGTTGCT
AAAAAAGCAA TCGCAATGAG AAGATTTGGA CAAACGATCG TTGAAGCCGT AGGTGGGAGA
CCAATTCACC CAGTAACTGG TATTCCTGGC GGACAAGCTA AGGTTTTCAC CGAAGAAAAA
AGGGACGAAA TCCTAACTGA AATGGATGCA ATGATTGAAT TTGGCCAAGA AGGACTCGCT
ATAATGAAGT CCCTCAACGA AAAATACTTA GATACAATAA AAACACTTGG TGTAATCGAT
ACCTGGTATT TAGGTTTAGT AAAAGATGGT AAACACAATT TCTACGGCGA CACGTTAAGA
TTCATGTCAC CTGACGGAAA AGAAACCATG GATTTCAAAC CTTCAGAATA TACTGATTAC
CTTGGTGAAC ACACTGTAGA CCATAGCTAT GTAAAGTATC CGTACAATAA AAAAGTAGGG
TATCCTGATG GTCTTTATAG GGTAGGTCCA CTTGCAATGA TTAACGTATG TGACTCAATG
GCTACGCCAC TTGCTGAGGA AGCTAGGAAA GAATTTGTAG AAACTTTTGG AAAGCCTGCA
AACCAGTCCT TAGCATACAA CCAAGCAAGA CTTATAGAGT TACTAAGTGC ATGCGAAAGA
ACCAAACAAC TATTGGAAGA CCCAGAAATT ACCTCAACCG ACATCAAAGC AGAGGTTCAA
CCAAAAGCAG GAAATGGTGT CGGAGTAGTA TATGCTCCAA GAGGTACGTT ATTCCACAAT
TATGAAACTG ATGACAACGG AATTGTTGTA AAGGCAAACA TGATTGTAGC AACGACACAC
AATGTACCTA CAATGGAAAA AGCAATCCAG CAGGCTGCAA GTGTGGTCTT CAAATAA
|
|---|
| Protein sequence | MGKVTIEPLT RLEGHGKVTI TLDDSGKPTD VKLNITALRG FEQFVVGRPA EEVPRIVPRI
CGICQTAHHL ASVKAVDAAW GAQIPIAAEK LRELMHLGNM IHSHALHFYY LAAPDFVLGP
DADPAVRNII GVIGAAPEVA KKAIAMRRFG QTIVEAVGGR PIHPVTGIPG GQAKVFTEEK
RDEILTEMDA MIEFGQEGLA IMKSLNEKYL DTIKTLGVID TWYLGLVKDG KHNFYGDTLR
FMSPDGKETM DFKPSEYTDY LGEHTVDHSY VKYPYNKKVG YPDGLYRVGP LAMINVCDSM
ATPLAEEARK EFVETFGKPA NQSLAYNQAR LIELLSACER TKQLLEDPEI TSTDIKAEVQ
PKAGNGVGVV YAPRGTLFHN YETDDNGIVV KANMIVATTH NVPTMEKAIQ QAASVVFK
|
|---|
| |