| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_1215 |
|---|
| Symbol | |
|---|
| ID | 5326388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus aeolicus Nankai-3 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009635 |
|---|
| Strand | + |
|---|
| Start bp | 1285097 |
|---|
| End bp | 1286353 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640788620 |
|---|
| Product | nickel-dependent hydrogenase large subunit |
|---|
| Protein accession | YP_001325404 |
|---|
| Protein GI | 150401638 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAA TTACAATTGA ACCAATATCC CGAATTGAAG GGCATGGGAA AGTTACAATT
ACATTGGACG ACTCAGGAGC TCCCACCGAT GTTAAGTTGC ACATAACAGC ACTAAGAGGA
TTTGAACAAT TTGTTGTTGG AAGACCCGCA GAGGAGGTTC CAAGGATTGT CCCAAGAATC
TGCGGTATAT GTCAAACTCC ACATCACTTA GCATCCGTTA AAGCTGTTGA GGCAGCATGG
GATGCTGAGG TTCCAAGTGC AGCTAACAAA GTGAGGGAAT TAATGCATTT AGGAAATATG
ATTCACAGTC ATTCATTACA TTTCTATTTC CTGGCTGCTC CTGATTTTGT AATGGGCCCA
GATTCAAACC CCGCTACAAG AAACATAGTT GGAGTAATCG GGGAAGCTCC TGATGTCGCA
AAACAGGCAA TAGCTTTAAG AAAATTTGGT CAAACCATAG TAGCAACCAC CGGGGGAAGA
CCAATACACC CGGTAACAGG TATTCCAGGG GGATTGTCAA AATCATTTGC AGAAGCTGAT
AGAGATGCAT TTTTGGCTGA AGTAGATACA ATGATTGAAT ATGCTCAAAA TGGAGTAGCA
TTAATTAATT CATTAAATGA AAAATACGCA GATGCTACTA AATCATTGGG TGTAATTGAT
ACTTGGTATT TAGGAATGGT TAAAGATGGA AAACATAATT TCTATGAAGA TACACTTAGA
TTTGTATCTC CTGATGGAAA AACAAAACAA GAATTCAAAC CAGCCGAATA TCTTGATAAT
ATTGGAGAGC ATGTTGTAGA ACACAGCTAT TCAAAATATC CATACAATAA AAAAGTAGGA
TATCCTGATG GATTATATAG GGTAGGTCCA TTGCCAATGC TAAATGTATG TGATAGTATG
GCAACACCAC TTGCAGAAGA AGCAAGAAAA GAATTTGTTG AAACATTCGG AGCTCCTGCA
AATCAATCAT TAGCTTACAA CCATGCAAGA TTAATAGAAA TATTGGCAGC ATGCGAAAGA
GTTAAAGAAT TGTTAAATGA TGGAGAAATT ACTTCAACCG ATGTTAAAGC AGAAGTTCAA
CCAAAGGCAG GAAATGGTGT TGGAGCAATA TATGCACCAA GAGGAACGCT ATTCCACAAC
TATGAAACAG ATGACAATGG AATAGTTATA AAAGGTAATA TGATTGTTGC TACTACCCAC
AATGTGCCAA CAATGGAAAA GGCAATTCAA CAAGCTGCAA AAGAAATATT TAAATAA
|
|---|
| Protein sequence | MSKITIEPIS RIEGHGKVTI TLDDSGAPTD VKLHITALRG FEQFVVGRPA EEVPRIVPRI
CGICQTPHHL ASVKAVEAAW DAEVPSAANK VRELMHLGNM IHSHSLHFYF LAAPDFVMGP
DSNPATRNIV GVIGEAPDVA KQAIALRKFG QTIVATTGGR PIHPVTGIPG GLSKSFAEAD
RDAFLAEVDT MIEYAQNGVA LINSLNEKYA DATKSLGVID TWYLGMVKDG KHNFYEDTLR
FVSPDGKTKQ EFKPAEYLDN IGEHVVEHSY SKYPYNKKVG YPDGLYRVGP LPMLNVCDSM
ATPLAEEARK EFVETFGAPA NQSLAYNHAR LIEILAACER VKELLNDGEI TSTDVKAEVQ
PKAGNGVGAI YAPRGTLFHN YETDDNGIVI KGNMIVATTH NVPTMEKAIQ QAAKEIFK
|
|---|
| |