| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2258 |
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| Symbol | |
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| ID | 8420116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2565630 |
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| End bp | 2567090 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645038859 |
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| Product | nickel-dependent hydrogenase large subunit |
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| Protein accession | YP_003199120 |
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| Protein GI | 258406378 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGA AAATCAGCAT CGATCCACTG ACCCGTCTCG AGGGCCACGG CAAGATCGAT
ATCTTTCTCA ACGACGACGG CACCGTGCAG GACAGTTATT TCCAGGTTGT CGAACTCCGG
GGATTCGAGC AATTCTGTCA GGGCCGTCCC GTGGAGGAAC TCCCCAGGAT TACACCGAAA
ATCTGCGGTG TCTGCCCTGG TGCCCACCAT ATGGCCTCTT CCAAGGCAGC GGATGCGGTC
TACGGGCTGA CGCCCCCTCC AGCGGCGCGC AAAATACGCG AACTTTTTTA CAATGCCCAC
ATCGCCCACA GCCACATCCT GCACTTTTTC GCCCTGGCCG CTCCGGATTT CATGCCCGGG
CCGGAAGCAG GCCCGGGCAA ACGGAATATC CTGGGACTCG TGGACGAACT CGGCAAGGGC
GCGGTGCGCC GGGTCCTGCA AAATCGCGGA TACGCCCAGA AAATCCAGGG TCTTATAGCC
GGTCACCCCA TCCATCCGGT GGCGTCCCTG CCGGGCGGCA TGGCTGGTCC CGTGTCCGAA
AAGACGCGGC AGGAAATCGC TGGCATGGCC TCTGAGATCA GGGAGTTCGC CCAATTCGCG
CTCTGGTTTT TTGAAAACCA TATCCTGGCC CAGGACAGAA ACCGGGAGTT GCTCACCGGT
GAGCTCTTTA CCCACCGGAC CCATTATATG GGCCTGGTCG ACTCCCAGGG CCGGGTCAAT
TTCTACGACG GGCAGTTGCG GGTGGTGACC CCCGAAGGGG AGACCATGGC CCAGTTCGAT
GGCAGCGATT ACCTCGAGCA TCTCGCTGAA ACGGTGTTGC CGTGGAGCTA TATGAAGTTT
CCCTACCTGC GGGACAAAGG GTGGCACGGT CTTATCGATG GGGCCGACAG CGGTGTGTAC
CGGGTCAATT CCCTGGCCCG GCTCAATGTC GCGGACGGTA TGGCCACGCC GCTGGCCCAA
GAGGCGTATG AAACGATGCG CGCCTTTTAC GGCGGCACCC CGATCCACAA CACCCTGGCC
TTCCACTGGG CCCGGCTGGT TGAACTCATG CAGGCGGCCG AGGCCCTGGT GGACCTCTCG
CAGGATCCGG AAGTGACTGA CACGAATGTG CGCAGTCTGC CAGAGGGGCG GCCCGGCGAG
GGAGTCGGGG TTGTCGAAGC GCCGCGGGGC TCGCTCATCC ACCATTACAC CACCGACGCC
AACGGCCTGG TCAAAACGGT CAATCTTATT GTGGCCACAG TCCAGAACAA TGCCGGGATG
GGCATGTCGG TCAAAAAGGC GGCCCAGGGA CTGATCCAGG ACGGCGCGCC GGACGAAGCC
GTCCTGGACA TGATCGAAAT GGGGTATCGC GCCTATGACC CCTGCCTGGC CTGCGCCACC
CATGCCCTGC CCGGGGAGTC AGACCTCGAG GTGCGCCTGT GGCACAACAA CGCCGTGTTC
CGGACTCTGA AACGGTCGTG A
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| Protein sequence | MAKKISIDPL TRLEGHGKID IFLNDDGTVQ DSYFQVVELR GFEQFCQGRP VEELPRITPK
ICGVCPGAHH MASSKAADAV YGLTPPPAAR KIRELFYNAH IAHSHILHFF ALAAPDFMPG
PEAGPGKRNI LGLVDELGKG AVRRVLQNRG YAQKIQGLIA GHPIHPVASL PGGMAGPVSE
KTRQEIAGMA SEIREFAQFA LWFFENHILA QDRNRELLTG ELFTHRTHYM GLVDSQGRVN
FYDGQLRVVT PEGETMAQFD GSDYLEHLAE TVLPWSYMKF PYLRDKGWHG LIDGADSGVY
RVNSLARLNV ADGMATPLAQ EAYETMRAFY GGTPIHNTLA FHWARLVELM QAAEALVDLS
QDPEVTDTNV RSLPEGRPGE GVGVVEAPRG SLIHHYTTDA NGLVKTVNLI VATVQNNAGM
GMSVKKAAQG LIQDGAPDEA VLDMIEMGYR AYDPCLACAT HALPGESDLE VRLWHNNAVF
RTLKRS
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