| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3855 |
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| Symbol | |
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| ID | 3961457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4303770 |
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| End bp | 4305293 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637918680 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_525085 |
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| Protein GI | 89902614 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCT CACTCGAAAC CGCTGCCCCT GACGCCGTCG CCCAAGGCCT GCGCCGGGTC
GCCATCGACC CGGTGTCACG GGTCGAAGGC CATGGCAAGG TCACCTTGCT GCTCGACGCG
AACCACCGCG TGCAGCAGGT CCGCCTGCAC ATCGTCGAGT TCCGCGGCTT CGAGCAATTC
ATTCAGGGCC GACCTTACTG GGAGGTGCCG GTGATGGTGC AGCGGCTGTG CGGCATCTGC
CCGGTGTCGC ACCACCTGGC GGCGTCCAAA GCGTTCGACC GGGTGGTCGG CGCCTTGCCG
GTCACGCCGA CGGCTGACAA GATCCGCCGC TTGATGCATT ACGGCCAGGT GATGCAGTCG
CACGCCTTGC ACTTCTTCTA CCTGGCCGCG CCCGACCTGC TGTTTGGTTT TGACTCCGAG
GTGAACCGGC GCAACATCGT CGGCGTGGCG CAGGCCCATC CCGACATCGC CCGCAAAGGT
GTGCTGCTGC GCAAGTTCGG CCAGGAGTTG ATCCGCGCCA CCGCGGGCAA GCGCGTGCAT
GGCAGCGGCT CGGTGCCGGG CGGCGTCAAC AAGCACGTCA GCCCGCAAGA CCGGGCCCTG
CTGCAACGCG ATGTGGCGCA AATGATCGCC TGGGCGCAAG AAGCCGTTTT GATTGCCAAA
CAATTACATG CGCAGAACCC GGCGCTGTAC GATAGTTTTG GCAGCTTTCG CTCCAACCTG
CTGTCGCTGG TCAGGATGGA TGGCGCGCTG GACCTGTACG ACGGCGTGCT GCGGGCGCGC
GACACGGCGG GTGCCATCCT GTTCGATGGC GCCAGCGACC AGGACTATCT GGGCTTGATC
GAGGAAGAGG TCAAGCCCTG GACCTACATG AAGTTCCCGT TCCTCAAAAG CCTGGGGCCG
GAGTTGGGCT GGTACCGGGT TGGGCCGCTG GCACGGCTGC AAAACTGCGA CTTCATCCCC
AGTCCGCTGG CTGAACGTGA GCGCCTGGAC TTCATCGCCT GGGGCCGGGG CGAGCCGATC
CAGGCCACGC TGGCCTACCA CTGGGCGCGC ATGGTGGAGA TGCTGCATTG CGTCGAGGTC
ATCCAGGGTC TGCTGGATGA CCCCGACATT CTGGGCGGCG AGCTGATCGC CAGCGGGCCG
CGCCAACGCG GCGGCGTCGG GGTGATCGAG GCGCCGCGCG GTACGTTGTT CCACCATTAC
GAGGTTGGCG ACGATGATCT GGTGACGATG TGCAACCTGA TCGTCGCCAC CACCCACAAC
AACCAGGCCA TGAACGAAGC CGTGCGATCG GTGGCACGCG AGTACCTGGA TGGGCGCGAG
TTGACCGAAG GCCTGCTCAA TCATATCGAG GTCGCCATCC GCGCTTACGA CCCCTGTCTG
TCGTGTGCCA CCCATGCGCT GGGTCGGATG CCGCTGGAGG TGACGCTGCT CGGGTTTGAC
GGCGCGCTGA TCGACCGTGT CCTCAAGTCG CACAGCGGTG AGTTCCGCCA TGACCTGGGT
ACTGTGCCAA GCGTATCGGT ATGA
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| Protein sequence | MSTSLETAAP DAVAQGLRRV AIDPVSRVEG HGKVTLLLDA NHRVQQVRLH IVEFRGFEQF
IQGRPYWEVP VMVQRLCGIC PVSHHLAASK AFDRVVGALP VTPTADKIRR LMHYGQVMQS
HALHFFYLAA PDLLFGFDSE VNRRNIVGVA QAHPDIARKG VLLRKFGQEL IRATAGKRVH
GSGSVPGGVN KHVSPQDRAL LQRDVAQMIA WAQEAVLIAK QLHAQNPALY DSFGSFRSNL
LSLVRMDGAL DLYDGVLRAR DTAGAILFDG ASDQDYLGLI EEEVKPWTYM KFPFLKSLGP
ELGWYRVGPL ARLQNCDFIP SPLAERERLD FIAWGRGEPI QATLAYHWAR MVEMLHCVEV
IQGLLDDPDI LGGELIASGP RQRGGVGVIE APRGTLFHHY EVGDDDLVTM CNLIVATTHN
NQAMNEAVRS VAREYLDGRE LTEGLLNHIE VAIRAYDPCL SCATHALGRM PLEVTLLGFD
GALIDRVLKS HSGEFRHDLG TVPSVSV
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