| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2174 |
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| Symbol | |
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| ID | 4848137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 2168226 |
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| End bp | 2169593 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640116882 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_001048079 |
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| Protein GI | 126180114 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
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| TIGRFAM ID | [TIGR03295] coenzyme F420 hydrogenase, subunit alpha |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCGAAAG TTGTAGAGAT TTCCCCAACT ACGAGACATG AAGGCCATTC AAAGCTCGTT
CTAAAGGTCA ACGATGAAGG CATCGTCGAG CGTGGAGACT GGCTTAGCAT CACCCCGGTG
AGGGGTGTCG AGAAACTCGC CATCGGCAAG ACGATGGAGC AGGTTCCAAA GATCGCATCG
CGCGTCTGCG GCATCTGTCC CATCGCGCAC ACCCTGGCGG GTATTGAGGC GATGGAAGCA
TCCATCGGGT GCGAGATCCC CGAGGACGCG AAACTGCTGC GGTACATCCT GCAGTGTGCC
AACAGGATGC ACAGCCACGC CATCCACAAC ATCCTGTCCC TCCCGGACAT GTACATCCCC
GGAACCGACG TAAAGATCAA CCCGTTCACC AAGGAAGAAC CGGTCAGGAG CGTTGCTCTT
CGGATCCAGC GGCTCCGTGA GATCGGCCAG ACCATCGGCG AGATCGTCGG CGGAGAGGCC
ATCCACCCGA GCAACCCCCG TGTCGGCGGT ATGTACAAGA ACATCACCCC GCGGGCGAAG
GCGAAACTCT ACGATCTCGC CAAGGAATCT CGTGTCCTTG CCCAGGAACA GATGGAGTTC
ATGATCGCGG TCTTCCGGAA CTACCAGAAC CGCGACTGGT CTGAAGTCGG CGGCGTCGAA
GTCCCGATCA CGAAGGACCT CGGCTACCAC AACCAGGGCT ACATGGCTAC CGCGCCGGTC
TACGGCAGCT CGAGCCTCGA CGAGACCCCG ATGTGGTTCC CCGATCGGTT CACCGAAGTC
CGCCCCTGGG ACTGGTACAT GGGCGAAGTC GAGATCGACG AAGCCGACCC GAACTACCCG
ATCGGCGGCA CGACCCCCGT AGGGAACAAG GCCTGGCCCC AGATGGAGGC CTGCACCGGC
GTCCCGCTCT ACGACGGCCA GCCCGTCGAG GTAGGACCGC GTGCACGTCT CGTCCAGTTC
AAGAACTACG ACGAGAAGGG CGCCATGGGC CTGCAGATCG CTCGCCAGAT GGAATTCCCC
GAGACTGCCT ACGGCATCAT CGACGCGCTC GACGCGCTCG ACACCTCCGG ATCGGTCCTC
GCGGACGAGA TCCCGCAGGG TGACGGATCC TTCGGATGGG CCGCAAACGA GGCTCCCCGT
GGAACCGACG TCCACATGGC CAAGGTCAAG GACGGCCGGG TGGAGTACTT CGGGATGCTC
GTCCCGACGA CCTGGAACTT CCCCACCTGC AGCCGTGCAC TGACCGGTGC ACCCTGGCGG
CTTGCGGAAG TCATCATGCG TGCATACGAC CCCTGTGTCT CCTGTGCGAC GCACATGCTG
GTGATCGACG AAGACAAGAG ACTGGTGGCC CAGAAACTCA TTCAGTGA
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| Protein sequence | MSKVVEISPT TRHEGHSKLV LKVNDEGIVE RGDWLSITPV RGVEKLAIGK TMEQVPKIAS
RVCGICPIAH TLAGIEAMEA SIGCEIPEDA KLLRYILQCA NRMHSHAIHN ILSLPDMYIP
GTDVKINPFT KEEPVRSVAL RIQRLREIGQ TIGEIVGGEA IHPSNPRVGG MYKNITPRAK
AKLYDLAKES RVLAQEQMEF MIAVFRNYQN RDWSEVGGVE VPITKDLGYH NQGYMATAPV
YGSSSLDETP MWFPDRFTEV RPWDWYMGEV EIDEADPNYP IGGTTPVGNK AWPQMEACTG
VPLYDGQPVE VGPRARLVQF KNYDEKGAMG LQIARQMEFP ETAYGIIDAL DALDTSGSVL
ADEIPQGDGS FGWAANEAPR GTDVHMAKVK DGRVEYFGML VPTTWNFPTC SRALTGAPWR
LAEVIMRAYD PCVSCATHML VIDEDKRLVA QKLIQ
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