Gene MmarC5_0649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_0649 
Symbol 
ID4928458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp622432 
End bp623664 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content38% 
IMG OID640166152 
Productcoenzyme F420-reducing hydrogenase, alpha subunit 
Protein accessionYP_001097176 
Protein GI134045690 
COG category[C] Energy production and conversion 
COG ID[COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit 
TIGRFAM ID[TIGR03295] coenzyme F420 hydrogenase, subunit alpha 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTAAGA CGGTAGAGAT AAATCCTACG ACAAGACATG AAGGGCATAC CAAACTTGTC 
TTGAAAGTGG ATGACGATGG AATTGTTGAA AAAGGTAACT ATTTGAGTGT TACCCCCGTC
AGAGGATTTG AAAAATTTTT GGTCGGAAAA ACTGCGGAAT TTGCACCAAT TGCCGTTTCA
AGATTTTGTG GAATTTGTCC AATTGCACAC GCTACTTCCT CAGTAGAAGC TATTGAAGAC
GCATGTGGAA TTACACCACC AAAAGATGGA TTATTGTTAA GAGAATTAAC GGGTCTTGGA
AATAAAATGC ATTCCCACCC ATTACACGAG TTTTTAATCG CTCCAGACTT TATACCTGAA
TCAGACCGAG TTGAATATAT CACAAGAATT CAACAAATGA GAAAAACTGG ACAGTATATT
GTTGATACAA TCGGTGGAGA AGCAATCCAC GCACCAAATA TCAAAGTTGG AGGTATGTTA
AAAAACATTA CCGAAAATGC AGCTTCAAAA ATATACTACA AATGCAGAGA ATACGAAAAA
TTAGCAAAAG AACATGTTGA ATATTTAATT CCTATTTTTG AAAGCAACAT GCTTGTAGAT
GGAACAGAAA TTCCTGAAAA ATTAGGTTAC CACGATTTTG GATACATTGC AACTGATGCA
ACATACGGAA ACAGGGAAAA CATCGACCAA AGTAGGGTAG TTGAATATAC GCCATACGAC
GTGTACGAAA AAGACGTTGC AGTGCAAGCT TGTACCACAA TTCCAAGATA CAATGGCAGA
TTAATGGAAG TTGGTCCAAG AGCAAGATTT GCAAGATTCC ACGACTTTAA AAACAAAGGT
GCTATGGCAA TACACATTGC AAGAGCTTAT GAAAACGTTG TACACGTAAA AAAAGCAATG
GAAATCCTTG ATGAATTAGA TGTTAATGGA AAAACAAGAT CAAATGAACC CATCCTCGGA
GACGGTGAAA AAGTAGGTCT TGGTGTTCAT GAAGCTGCGA GAGGTCACAA CACCCACCAA
GCTGCAATTG ACGCAAAAGG AAGAATTACC TATTATAACG CAATTGTTGC AACCACCTGG
AATATCCCAT TAATTGGAAA AGCTACAGAA GGAACCCACT ACAAATTTGC AGAACACGTT
GTAAGAGCAT ACGATCCATG TGTATCCTGT GCAACCCACG TAATTGCAAT GGACTATGAT
AACAAAATTG TTGACAAAAA ATTAATACAA TAA
 
Protein sequence
MGKTVEINPT TRHEGHTKLV LKVDDDGIVE KGNYLSVTPV RGFEKFLVGK TAEFAPIAVS 
RFCGICPIAH ATSSVEAIED ACGITPPKDG LLLRELTGLG NKMHSHPLHE FLIAPDFIPE
SDRVEYITRI QQMRKTGQYI VDTIGGEAIH APNIKVGGML KNITENAASK IYYKCREYEK
LAKEHVEYLI PIFESNMLVD GTEIPEKLGY HDFGYIATDA TYGNRENIDQ SRVVEYTPYD
VYEKDVAVQA CTTIPRYNGR LMEVGPRARF ARFHDFKNKG AMAIHIARAY ENVVHVKKAM
EILDELDVNG KTRSNEPILG DGEKVGLGVH EAARGHNTHQ AAIDAKGRIT YYNAIVATTW
NIPLIGKATE GTHYKFAEHV VRAYDPCVSC ATHVIAMDYD NKIVDKKLIQ