| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_0097 |
|---|
| Symbol | |
|---|
| ID | 5327509 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus aeolicus Nankai-3 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009635 |
|---|
| Strand | - |
|---|
| Start bp | 104119 |
|---|
| End bp | 105546 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640787492 |
|---|
| Product | nickel-dependent hydrogenase large subunit |
|---|
| Protein accession | YP_001324301 |
|---|
| Protein GI | 150400535 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.325648 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAAAT TATCAGTTGA GCCTGTTACA CGAGTTGAAG GACATGGCAA AATAACTGTG
TCTTTTGACG AAAGTGGAGC TTTGGATACA GTTCATTTTA ATGTGGTGGA AGTAAGAGGT
TTTGAAAAAT TTATGGAAGG AAGATATGTG GAAGATGCAC CAATATTGAC CCCGAGAATC
TGCGGTATAT GTCAAGTTTC TCACCATTTA GCAAGTGCAA AAGCCGTGGA TGAAATATAT
GGAGTAAAGA TTCCAGAAAC CGCAATGCTT TTAAGAAATT TGATGCATCA AAGTTCAACA
GTTCATAGTC ATGCCCTTCA TTTTTATGCT CTTGCGGCAC CTGATTTAAT GTTTCCTACA
ACGGACGATA TATTAAAAAG AAATTTAATG GGCATGGCAA AAGAACATCC CGAAGTTGTT
AAAGAAGCAA TTGAATTAAG AAAAATAGGC CAAACTATTG TTAGAGTCGT CGGTGGAAGA
GCAATTCACC CCTGCACAGC AGTTGTTGGA GGGCAGTCCA TATCATTAAG TGAAACTAAA
AGGGATGAAT TATTAAAATT ATCAGATAGG GCGGTTGAGT TATCTGAAAA ATCGATCGAA
ATTGGAAAAA AATTAATTGA AAATATAAAA AATAATGATT TATTGGATAT CGGATACTTT
GAATCCTATC ATGCCGGAAT GGTAAATGAT GGCACACATG AATTATATGA TGGAAAAATT
AGAGTATGCG ATTCAAAAGG AAAAACAGCT TATGAATATA ATCCATCAGA ATATTTAAAC
TATATTGCCG AAGGAGTTAA ACCATATTCT TATTTAAAAT TCCCATACTT AAAAGACCTC
GGGGAAGAAG AAGGCGTTTA TAGGGTAAAT ACCCTATCAA GGCTCAATGT AGCGGACAGA
ATGGCAACAC CCCTTGCACA AAAATATTAT AAAGAATTTA TCGAAGAATA TGGAGAACCA
TGCCATTATC CGGTGCTATT TAATTATGCA AGATTAATAG AAATGCTTTC AAGTGCTGAA
CTAACGAAAA AATTATTAGA AAATGATAAA ATCGTTGATA CCGATATAAA GGCAGAACCT
AGTGGAGATG TAGTTGGCGA AGGTGTCGGA TGTGTTGAAG CACCAAGGGG GACATTATTC
CACCACTTCA AAACAGATGA TAAAGGAGTT ATTACCGACA CAAACTTAAT TGTGGCAACA
ACTCAGAATA ATCCTGCAAT GGACATCGGA GTAAAAAAAG TAGCTGAAAA ATATATAAAA
ACACCCGAAG ATGCAACACC AAATATTTTA AATTATATGG AAATGGTAAT TAGAGCTTAT
GACCCCTGTT TATCTTGTGC CACACATGTT ATAGGAGATT CTGGTGGTAG TGGCCTTATA
TTGGAAACAT ATGAAGAAAA TAAATTAATT AAATCAGTTC GAAATTAA
|
|---|
| Protein sequence | MVKLSVEPVT RVEGHGKITV SFDESGALDT VHFNVVEVRG FEKFMEGRYV EDAPILTPRI
CGICQVSHHL ASAKAVDEIY GVKIPETAML LRNLMHQSST VHSHALHFYA LAAPDLMFPT
TDDILKRNLM GMAKEHPEVV KEAIELRKIG QTIVRVVGGR AIHPCTAVVG GQSISLSETK
RDELLKLSDR AVELSEKSIE IGKKLIENIK NNDLLDIGYF ESYHAGMVND GTHELYDGKI
RVCDSKGKTA YEYNPSEYLN YIAEGVKPYS YLKFPYLKDL GEEEGVYRVN TLSRLNVADR
MATPLAQKYY KEFIEEYGEP CHYPVLFNYA RLIEMLSSAE LTKKLLENDK IVDTDIKAEP
SGDVVGEGVG CVEAPRGTLF HHFKTDDKGV ITDTNLIVAT TQNNPAMDIG VKKVAEKYIK
TPEDATPNIL NYMEMVIRAY DPCLSCATHV IGDSGGSGLI LETYEENKLI KSVRN
|
|---|
| |