| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0479 |
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| Symbol | |
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| ID | 5410164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 463141 |
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| End bp | 464454 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640867691 |
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| Product | coenzyme F420 hydrogenase |
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| Protein accession | YP_001403640 |
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| Protein GI | 154150022 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
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| TIGRFAM ID | [TIGR03295] coenzyme F420 hydrogenase, subunit alpha |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.654505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCTTGA AGGTTAACGA CCAGGGCATC ATTGAGACGG GTAACTGGTG TTCCATTACC
CCGGTGAGGG GCGTAGAGAA GCTTGCCGTC GGCAAGACCC CCGAACAGGT GCCGAAGATC
GCATCCCGTG TCTGTGGTAT CTGCCCGATA GCCCACAACC TTGCGGCTAC CGAAGCGATG
GAAGCATCGA TCAAGTGCGA GATCCCCAAG GATGCAAAGG CGCTCCGTAA TATCCTGCAG
CTCGCAAACC GGCTGCACAG CATTGCGCTG CACGATATCC TGATCCTGCC CGATCTGTAT
ATCCCGGGTA CCGAGACCAA GATCAACCCG TTCACGGCAG AAGAGCCGGT GCGCACCGTT
GCAAAGCGCA TCCAGCGCCT CCGTGAGATC GGACAGACCA TTGGCCAGAT TGCTGGCGGC
GACTGCATCC ACCCGAGAAA CACCCGTATC GGTGGTATGT ACCGCAACTG CTCCGAGCAG
GCCAAGACCA AGATGTACGA CCTCGCCAAG GAAGGACTTG TCCTTGCCAA GGCCCAGATG
GACTTCATGA TCGCAGTCCT GAGGAACTAC CAGGCACGCG AATCCGTCGA TGTTGGCGGC
ATGAAGGTTC CCCTGCCCAA GACCCTCGGG TACCATAATC AGGGCTACAT GGCAACCCAT
GCATTCTATG GCAGCTCGAG CCTTGACGAA TGCCCCACAT GGGACATCAA CCGGTTCAAG
GAAGTCCGGC CATGGGACTG GTACATGGGC GAGATGGAAG TTTCGCTCGA AGAGCCACGG
TACCCCGTTG GCGGAACCAC CAAGATTGGC ACCAAGGTCA ACCCCCAGAT GGAGGCCTGC
ACCGGCATCC CGATGTACGA TGGCCAGCCG GTAGAAGTCG GTCCGCGTGC CCGTCTTGCG
ACCTACAAGA ACTACGATGA GAAGGGCACA GTAGGCCAGA ATATTGCCCG TGAGATGGAG
TACACTGACA GCCTGTACGA GATGATCGAT CAGATCGATG CACTCGACAC CTGCGGAAAG
GTTGTTGCAG ACTTTATCCC CGATGGCGAC GGATCCCTTG GCTGGGCAAC CAACGAGGCA
CCCCGCGGCT GCGATGCACA CATTGCCCGT GTCAAGGACT GGAAGGTCCA GTACTTCAGC
ATGCTCGTAC CGACCACATG GAACTTTGCA ACCTGCAGTG CAGCCCTCAC CGGCGCACCT
TGGCAGCTTG CCGAAGTCAT CATGCGCGGG TACGACCCCT GTGTATCATG TGCAACCCAC
ATGATCGTAC TGGATGAAGA CAACAAAGTA GTGGCTCAGA AGCTCATCCA GTGA
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| Protein sequence | MVLKVNDQGI IETGNWCSIT PVRGVEKLAV GKTPEQVPKI ASRVCGICPI AHNLAATEAM
EASIKCEIPK DAKALRNILQ LANRLHSIAL HDILILPDLY IPGTETKINP FTAEEPVRTV
AKRIQRLREI GQTIGQIAGG DCIHPRNTRI GGMYRNCSEQ AKTKMYDLAK EGLVLAKAQM
DFMIAVLRNY QARESVDVGG MKVPLPKTLG YHNQGYMATH AFYGSSSLDE CPTWDINRFK
EVRPWDWYMG EMEVSLEEPR YPVGGTTKIG TKVNPQMEAC TGIPMYDGQP VEVGPRARLA
TYKNYDEKGT VGQNIAREME YTDSLYEMID QIDALDTCGK VVADFIPDGD GSLGWATNEA
PRGCDAHIAR VKDWKVQYFS MLVPTTWNFA TCSAALTGAP WQLAEVIMRG YDPCVSCATH
MIVLDEDNKV VAQKLIQ
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