More than 300 homologs were found in PanDaTox collection
for query gene Emin_0309 on replicon NC_010644
Organism: Elusimicrobium minutum Pei191



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010644  Emin_0309  short-chain dehydrogenase/reductase SDR  100 
 
 
249 aa  505  9.999999999999999e-143  Elusimicrobium minutum Pei191  Bacteria  hitchhiker  0.000668025  hitchhiker  0.00000185563 
 
 
-
 
NC_012918  GM21_2296  short-chain dehydrogenase/reductase SDR  42.4 
 
 
238 aa  182  4.0000000000000006e-45  Geobacter sp. M21  Bacteria  n/a    normal  0.0366896 
 
 
-
 
NC_008639  Cpha266_0157  short-chain dehydrogenase/reductase SDR  43.21 
 
 
249 aa  181  1e-44  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3431  short-chain dehydrogenase/reductase SDR  42.86 
 
 
238 aa  177  2e-43  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  hitchhiker  0.000136725 
 
 
-
 
NC_013922  Nmag_0449  short-chain dehydrogenase/reductase SDR  37.6 
 
 
257 aa  168  6e-41  Natrialba magadii ATCC 43099  Archaea  normal  0.237578  n/a   
 
 
-
 
NC_013743  Htur_2534  short-chain dehydrogenase/reductase SDR  36.65 
 
 
247 aa  156  3e-37  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_002950  PG1221  short chain dehydrogenase/reductase family oxidoreductase  35.66 
 
 
241 aa  142  7e-33  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.810471 
 
 
-
 
NC_009831  Ssed_1470  short-chain dehydrogenase/reductase SDR  32.92 
 
 
255 aa  135  9e-31  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00108636  hitchhiker  0.000219096 
 
 
-
 
NC_004347  SO_1674  short chain dehydrogenase family protein  32.5 
 
 
247 aa  125  4.0000000000000003e-28  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_1393  short-chain dehydrogenase/reductase SDR  32.37 
 
 
247 aa  125  6e-28  Shewanella putrefaciens CN-32  Bacteria  decreased coverage  0.0083444  n/a   
 
 
-
 
NC_008577  Shewana3_2774  short chain dehydrogenase family protein  32.64 
 
 
258 aa  125  7e-28  Shewanella sp. ANA-3  Bacteria  normal  0.051909  hitchhiker  0.000224975 
 
 
-
 
NC_008321  Shewmr4_2600  short-chain dehydrogenase/reductase SDR  32.64 
 
 
258 aa  123  2e-27  Shewanella sp. MR-4  Bacteria  hitchhiker  0.0000480386  hitchhiker  0.000000443735 
 
 
-
 
NC_008322  Shewmr7_2667  short-chain dehydrogenase/reductase SDR  32.64 
 
 
258 aa  123  2e-27  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000108179  normal  0.0377265 
 
 
-
 
NC_008609  Ppro_2872  short-chain dehydrogenase/reductase SDR  32.88 
 
 
222 aa  122  4e-27  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2553  short-chain dehydrogenase/reductase SDR  29.75 
 
 
256 aa  122  6e-27  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_1372  short chain dehydrogenase family protein  31.25 
 
 
274 aa  119  3e-26  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0570365 
 
 
-
 
NC_009901  Spea_2786  short-chain dehydrogenase/reductase SDR  30.83 
 
 
257 aa  117  1.9999999999999998e-25  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0573631  n/a   
 
 
-
 
NC_010506  Swoo_3206  short-chain dehydrogenase/reductase SDR  30.99 
 
 
255 aa  116  3e-25  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0196374  unclonable  0.0000000191957 
 
 
-
 
NC_009052  Sbal_1491  short-chain dehydrogenase/reductase SDR  30.83 
 
 
247 aa  115  3.9999999999999997e-25  Shewanella baltica OS155  Bacteria  decreased coverage  0.000349992  n/a   
 
 
-
 
NC_009665  Shew185_1486  short-chain dehydrogenase/reductase SDR  30.83 
 
 
247 aa  115  3.9999999999999997e-25  Shewanella baltica OS185  Bacteria  normal  0.0978937  n/a   
 
 
-
 
NC_011663  Sbal223_2860  short-chain dehydrogenase/reductase SDR  30.83 
 
 
247 aa  115  3.9999999999999997e-25  Shewanella baltica OS223  Bacteria  normal  0.0264369  hitchhiker  0.0000000000470617 
 
 
-
 
NC_009997  Sbal195_1522  short-chain dehydrogenase/reductase SDR  30.42 
 
 
247 aa  115  6.9999999999999995e-25  Shewanella baltica OS195  Bacteria  normal  0.0183678  normal  0.814955 
 
 
-
 
NC_007908  Rfer_3312  short-chain dehydrogenase/reductase SDR  30.04 
 
 
260 aa  114  2.0000000000000002e-24  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_0498  short chain dehydrogenase  31.33 
 
 
243 aa  98.2  1e-19  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.795397 
 
 
-
 
NC_003295  RSc0171  short chain dehydrogenase  31.62 
 
 
246 aa  95.9  5e-19  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.808724 
 
 
-
 
NC_008345  Sfri_1335  short chain dehydrogenase family protein  30.17 
 
 
247 aa  95.9  6e-19  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.00551908  n/a   
 
 
-
 
NC_010622  Bphy_2273  short chain dehydrogenase  29.88 
 
 
246 aa  93.6  2e-18  Burkholderia phymatum STM815  Bacteria  normal  0.869936  normal  0.452458 
 
 
-
 
NC_010681  Bphyt_0896  short chain dehydrogenase  30.04 
 
 
246 aa  94.4  2e-18  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_2676  short chain dehydrogenase  28.11 
 
 
264 aa  91.7  1e-17  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.989358 
 
 
-
 
NC_007951  Bxe_A3786  short chain dehydrogenase  28.63 
 
 
246 aa  90.9  2e-17  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.468877 
 
 
-
 
NC_007925  RPC_4209  short-chain dehydrogenase/reductase SDR  28.63 
 
 
247 aa  89.7  4e-17  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.351821  normal  0.500614 
 
 
-
 
NC_007614  Nmul_A2453  short chain dehydrogenase  28.51 
 
 
261 aa  88.6  9e-17  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA2567  short chain dehydrogenase  29.88 
 
 
245 aa  86.7  3e-16  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0117  short chain dehydrogenase  27.73 
 
 
250 aa  85.9  6e-16  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_1974  short-chain dehydrogenase/reductase SDR  33.87 
 
 
258 aa  85.1  0.000000000000001  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_6249  short chain dehydrogenase  28.51 
 
 
245 aa  83.2  0.000000000000003  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_4665  short-chain dehydrogenase/reductase SDR  29.66 
 
 
266 aa  83.6  0.000000000000003  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.871012  hitchhiker  0.000000000383418 
 
 
-
 
NC_007005  Psyr_2301  short chain dehydrogenase  27.06 
 
 
246 aa  83.6  0.000000000000003  Pseudomonas syringae pv. syringae B728a  Bacteria  decreased coverage  0.00458311  hitchhiker  0.00750193 
 
 
-
 
NC_008740  Maqu_1484  short-chain dehydrogenase/reductase SDR  28.35 
 
 
260 aa  83.2  0.000000000000004  Marinobacter aquaeolei VT8  Bacteria  normal  0.591298  n/a   
 
 
-
 
NC_009783  VIBHAR_01815  short chain dehydrogenase  34.78 
 
 
241 aa  82.4  0.000000000000006  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013159  Svir_13470  short chain dehydrogenase  26.15 
 
 
251 aa  81.3  0.00000000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_1330  short-chain dehydrogenase/reductase SDR  27.63 
 
 
247 aa  81.6  0.00000000000001  Gordonia bronchialis DSM 43247  Bacteria  normal  0.425796  n/a   
 
 
-
 
NC_008345  Sfri_2218  short chain dehydrogenase  27.31 
 
 
249 aa  80.1  0.00000000000003  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_4798  short-chain dehydrogenase/reductase SDR  27.2 
 
 
255 aa  80.1  0.00000000000003  Caulobacter sp. K31  Bacteria  normal  0.376241  normal  0.808586 
 
 
-
 
NC_007298  Daro_1708  Short-chain dehydrogenase/reductase SDR  25.68 
 
 
250 aa  79.7  0.00000000000004  Dechloromonas aromatica RCB  Bacteria  normal  0.361807  normal 
 
 
-
 
NC_007484  Noc_1950  Short-chain dehydrogenase/reductase SDR  28.8 
 
 
246 aa  79.7  0.00000000000004  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_0286  short-chain dehydrogenase/reductase SDR  28.85 
 
 
267 aa  79.3  0.00000000000006  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_1010  short-chain dehydrogenase/reductase SDR  25.19 
 
 
254 aa  79  0.00000000000007  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.904003  normal  0.571542 
 
 
-
 
NC_007298  Daro_3863  short chain dehydrogenase  25.7 
 
 
260 aa  78.6  0.00000000000008  Dechloromonas aromatica RCB  Bacteria  normal  0.331172  normal 
 
 
-
 
NC_008789  Hhal_1550  short-chain dehydrogenase/reductase SDR  26.17 
 
 
248 aa  78.6  0.00000000000009  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3172  short-chain dehydrogenase/reductase SDR  29.3 
 
 
250 aa  78.2  0.0000000000001  Pseudomonas putida W619  Bacteria  normal  0.0471693  normal 
 
 
-
 
NC_007643  Rru_A0427  Short-chain dehydrogenase/reductase SDR  28.06 
 
 
256 aa  77.8  0.0000000000002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2832  short chain dehydrogenase  26.98 
 
 
244 aa  77.4  0.0000000000002  Jannaschia sp. CCS1  Bacteria  normal  0.0580098  normal  0.214495 
 
 
-
 
NC_010622  Bphy_0185  short chain dehydrogenase  25.4 
 
 
256 aa  77.8  0.0000000000002  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_0632  short chain dehydrogenase  28.34 
 
 
249 aa  77.4  0.0000000000002  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_5291  short chain dehydrogenase  28.24 
 
 
260 aa  76.6  0.0000000000003  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2452  short chain dehydrogenase  25.98 
 
 
250 aa  76.6  0.0000000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_0885  short chain dehydrogenase  25.5 
 
 
250 aa  76.3  0.0000000000004  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
BN001302  ANIA_10469  oxidoreductase, short-chain dehydrogenase/reductase family (AFU_orthologue; AFUA_1G01330)  33.33 
 
 
264 aa  75.5  0.0000000000008  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.331607  normal 
 
 
-
 
NC_011901  Tgr7_1398  short-chain dehydrogenase/reductase SDR  27.13 
 
 
249 aa  75.5  0.0000000000008  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.646056  n/a   
 
 
-
 
NC_007005  Psyr_0959  Short-chain dehydrogenase/reductase SDR  30.49 
 
 
262 aa  74.7  0.000000000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1597  short chain dehydrogenase  28.35 
 
 
245 aa  74.7  0.000000000001  Methylobacterium populi BJ001  Bacteria  normal  0.139184  normal  0.109463 
 
 
-
 
NC_013517  Sterm_1096  short-chain dehydrogenase/reductase SDR  30.73 
 
 
256 aa  75.1  0.000000000001  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_012853  Rleg_5791  short chain dehydrogenase  28.79 
 
 
249 aa  74.3  0.000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_2785  short chain dehydrogenase  26 
 
 
254 aa  73.6  0.000000000003  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.73728  normal  0.939169 
 
 
-
 
NC_010322  PputGB1_2099  short-chain dehydrogenase/reductase SDR  27.85 
 
 
250 aa  73.2  0.000000000004  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_2164  short chain dehydrogenase  28.79 
 
 
247 aa  73.2  0.000000000004  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_012917  PC1_2097  short-chain dehydrogenase/reductase SDR  28.34 
 
 
238 aa  72.8  0.000000000005  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.434652  n/a   
 
 
-
 
NC_013730  Slin_1686  short-chain dehydrogenase/reductase SDR  27.17 
 
 
269 aa  72.8  0.000000000005  Spirosoma linguale DSM 74  Bacteria  normal  0.292744  normal 
 
 
-
 
NC_007204  Psyc_1201  short chain dehydrogenase  28.46 
 
 
289 aa  72.4  0.000000000006  Psychrobacter arcticus 273-4  Bacteria  normal  0.0718298  normal  0.0224844 
 
 
-
 
NC_009636  Smed_1362  short-chain dehydrogenase/reductase SDR  27.67 
 
 
282 aa  72.4  0.000000000006  Sinorhizobium medicae WSM419  Bacteria  normal  0.390824  normal 
 
 
-
 
NC_013440  Hoch_0320  short-chain dehydrogenase/reductase SDR  31.91 
 
 
240 aa  72.8  0.000000000006  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_1537  short-chain dehydrogenase/reductase SDR  28.28 
 
 
255 aa  72.4  0.000000000007  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  25.69 
 
 
262 aa  72  0.000000000007  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2391  short-chain dehydrogenase/reductase SDR  27.82 
 
 
260 aa  71.6  0.00000000001  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_6048  short chain dehydrogenase  23.6 
 
 
266 aa  71.6  0.00000000001  Delftia acidovorans SPH-1  Bacteria  normal  0.549002  normal 
 
 
-
 
NC_010506  Swoo_0293  short chain dehydrogenase  26.62 
 
 
267 aa  71.6  0.00000000001  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A4248  short chain dehydrogenase  24.8 
 
 
259 aa  71.2  0.00000000001  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.215124 
 
 
-
 
NC_007969  Pcryo_1188  short chain dehydrogenase  27.45 
 
 
291 aa  71.6  0.00000000001  Psychrobacter cryohalolentis K5  Bacteria  normal  0.0152839  normal  0.145128 
 
 
-
 
NC_008782  Ajs_4129  short chain dehydrogenase  26.69 
 
 
270 aa  71.6  0.00000000001  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_1026  short chain dehydrogenase  27.6 
 
 
270 aa  71.6  0.00000000001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.969015  normal 
 
 
-
 
NC_007575  Suden_1219  short chain dehydrogenase  29.2 
 
 
243 aa  70.5  0.00000000002  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_3014  oxidoreductase, short-chain dehydrogenase/reductase family  26.05 
 
 
257 aa  70.5  0.00000000002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.698047  n/a   
 
 
-
 
NC_011666  Msil_1220  short-chain dehydrogenase/reductase SDR  27.67 
 
 
267 aa  70.5  0.00000000002  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0396452 
 
 
-
 
NC_011992  Dtpsy_3487  short chain dehydrogenase  26.29 
 
 
270 aa  70.5  0.00000000002  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_0469  short chain dehydrogenase  26.38 
 
 
292 aa  70.1  0.00000000003  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_1648  short-chain dehydrogenase/reductase SDR  25.57 
 
 
245 aa  70.1  0.00000000003  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1119  oxidoreductase, short chain dehydrogenase/reductase family  29.06 
 
 
262 aa  70.1  0.00000000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4316  short-chain dehydrogenase/reductase SDR  31.84 
 
 
267 aa  70.1  0.00000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.691417  normal 
 
 
-
 
NC_007492  Pfl01_4738  Short-chain dehydrogenase/reductase SDR  30.91 
 
 
260 aa  70.1  0.00000000003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.9226  normal  0.284155 
 
 
-
 
NC_007912  Sde_2442  putative short-chain dehydrogenase  27.48 
 
 
231 aa  69.3  0.00000000005  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.198493 
 
 
-
 
NC_007963  Csal_0463  short-chain dehydrogenase/reductase SDR  28.11 
 
 
264 aa  69.7  0.00000000005  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2964  short-chain dehydrogenase/reductase SDR  27.42 
 
 
260 aa  68.9  0.00000000006  Acidovorax sp. JS42  Bacteria  normal  normal  0.166977 
 
 
-
 
NC_010511  M446_1704  short-chain dehydrogenase/reductase SDR  27.98 
 
 
327 aa  69.3  0.00000000006  Methylobacterium sp. 4-46  Bacteria  normal  0.151565  normal 
 
 
-
 
NC_011989  Avi_0085  gluconate 5-dehydrogenase  28.83 
 
 
256 aa  69.3  0.00000000006  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0143  short chain dehydrogenase  26.91 
 
 
243 aa  69.3  0.00000000006  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.896795 
 
 
-
 
NC_009457  VC0395_A0637  short chain dehydrogenase  30.89 
 
 
241 aa  68.9  0.00000000007  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000000368636  n/a   
 
 
-
 
NC_009092  Shew_1481  short-chain dehydrogenase/reductase SDR  27.69 
 
 
240 aa  68.6  0.00000000008  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_0327  short-chain dehydrogenase/reductase SDR  22.83 
 
 
249 aa  68.6  0.00000000009  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.726547  n/a   
 
 
-
 
NC_010681  Bphyt_0470  short chain dehydrogenase  23.62 
 
 
259 aa  68.6  0.00000000009  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.382263 
 
 
-
 
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