Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0143 |
Symbol | |
ID | 4461510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 174209 |
End bp | 174940 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639700898 |
Product | short chain dehydrogenase |
Protein accession | YP_844280 |
Protein GI | 116747593 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.896795 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGTGT TGATTTTGGG TGCCAATTCC GATATCGCCC GCGCGATCGC GGACAAGTTC GCGCGGGAAG AGGGCGCACA CCTGTGCCTC GCCTCAAGGG ATACCGACGA GCTCGAACGG CTGGCGAAAG ACATCGAGGT CCGGCACCGA ACCCGGGTGC AGATCGCGCG TTTCGACGCG CTGCAATTCG CCTCGCACCG GCTGTTTTAC GAAAGTCTCG ATCCGAAACC GGATACGGTG GTCGTCGCTT TCGGCTACCT GGGGAACCAG TCGCGGGCCC AGGCGGAATT CGACGAGGCG AGAAAGATCG TGGAAACCAA CTTCCTGGGG TGTGTCTCGA TTCTCGAGAT CATCGCCGAA GACTTCGAGG CCAGGGGGAG AGGGACCATA CTGGCCATCA GCTCGGTGGC CGGGGAACGA GGCCGGCAGA GCAACTACAT GTATGGATCG GCAAAATCCG CGCTGACGAC GTATCTTTCC GGCCTGCGCA ATCGGCTCTA CCGGAGAAAT GTCCGCGTGA TTACGGTCCT CCCGGGGTTT GTGCGCTCAA AAATGACCGA CGGGCTGAGG TTCCCGAAAA TGCTGTCCGC CGTTCCGGAA GAGACGGCCG ATGACGTGTT CCGGGCGTTC AAGAGCGGGG CTGACGAGGT GTACACAAAA TGGTTCTGGA AATGGATCAT GACGGTCATC AGAATGCTCC CGGAAAGAAT CTTCAAAAGG CTGCGGCTCT AA
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Protein sequence | MFVLILGANS DIARAIADKF AREEGAHLCL ASRDTDELER LAKDIEVRHR TRVQIARFDA LQFASHRLFY ESLDPKPDTV VVAFGYLGNQ SRAQAEFDEA RKIVETNFLG CVSILEIIAE DFEARGRGTI LAISSVAGER GRQSNYMYGS AKSALTTYLS GLRNRLYRRN VRVITVLPGF VRSKMTDGLR FPKMLSAVPE ETADDVFRAF KSGADEVYTK WFWKWIMTVI RMLPERIFKR LRL
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