More than 300 homologs were found in PanDaTox collection
for query gene Swoo_3206 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010506  Swoo_3206  short-chain dehydrogenase/reductase SDR  100 
 
 
255 aa  521  1e-147  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0196374  unclonable  0.0000000191957 
 
 
-
 
NC_009831  Ssed_1470  short-chain dehydrogenase/reductase SDR  85.49 
 
 
255 aa  455  1e-127  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00108636  hitchhiker  0.000219096 
 
 
-
 
NC_009901  Spea_2786  short-chain dehydrogenase/reductase SDR  79.61 
 
 
257 aa  425  1e-118  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0573631  n/a   
 
 
-
 
NC_004347  SO_1674  short chain dehydrogenase family protein  78.95 
 
 
247 aa  410  1e-114  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_1393  short-chain dehydrogenase/reductase SDR  79.84 
 
 
247 aa  408  1e-113  Shewanella putrefaciens CN-32  Bacteria  decreased coverage  0.0083444  n/a   
 
 
-
 
NC_008577  Shewana3_2774  short chain dehydrogenase family protein  78.14 
 
 
258 aa  407  1e-113  Shewanella sp. ANA-3  Bacteria  normal  0.051909  hitchhiker  0.000224975 
 
 
-
 
NC_008321  Shewmr4_2600  short-chain dehydrogenase/reductase SDR  78.54 
 
 
258 aa  408  1e-113  Shewanella sp. MR-4  Bacteria  hitchhiker  0.0000480386  hitchhiker  0.000000443735 
 
 
-
 
NC_008322  Shewmr7_2667  short-chain dehydrogenase/reductase SDR  78.54 
 
 
258 aa  408  1e-113  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000108179  normal  0.0377265 
 
 
-
 
NC_009092  Shew_2553  short-chain dehydrogenase/reductase SDR  78.51 
 
 
256 aa  404  1.0000000000000001e-112  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_1522  short-chain dehydrogenase/reductase SDR  76.52 
 
 
247 aa  402  1e-111  Shewanella baltica OS195  Bacteria  normal  0.0183678  normal  0.814955 
 
 
-
 
NC_011663  Sbal223_2860  short-chain dehydrogenase/reductase SDR  76.92 
 
 
247 aa  403  1e-111  Shewanella baltica OS223  Bacteria  normal  0.0264369  hitchhiker  0.0000000000470617 
 
 
-
 
NC_009665  Shew185_1486  short-chain dehydrogenase/reductase SDR  76.92 
 
 
247 aa  403  1e-111  Shewanella baltica OS185  Bacteria  normal  0.0978937  n/a   
 
 
-
 
NC_009052  Sbal_1491  short-chain dehydrogenase/reductase SDR  76.92 
 
 
247 aa  403  1e-111  Shewanella baltica OS155  Bacteria  decreased coverage  0.000349992  n/a   
 
 
-
 
NC_008700  Sama_1372  short chain dehydrogenase family protein  67.89 
 
 
274 aa  353  1e-96  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0570365 
 
 
-
 
NC_008345  Sfri_1335  short chain dehydrogenase family protein  59.51 
 
 
247 aa  314  8e-85  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.00551908  n/a   
 
 
-
 
NC_008554  Sfum_3431  short-chain dehydrogenase/reductase SDR  45.49 
 
 
238 aa  197  9e-50  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  hitchhiker  0.000136725 
 
 
-
 
NC_012918  GM21_2296  short-chain dehydrogenase/reductase SDR  37.34 
 
 
238 aa  156  3e-37  Geobacter sp. M21  Bacteria  n/a    normal  0.0366896 
 
 
-
 
NC_008639  Cpha266_0157  short-chain dehydrogenase/reductase SDR  34.17 
 
 
249 aa  153  2e-36  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_2534  short-chain dehydrogenase/reductase SDR  32.2 
 
 
247 aa  136  3.0000000000000003e-31  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_008609  Ppro_2872  short-chain dehydrogenase/reductase SDR  35.02 
 
 
222 aa  131  9e-30  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_0449  short-chain dehydrogenase/reductase SDR  31.62 
 
 
257 aa  128  8.000000000000001e-29  Natrialba magadii ATCC 43099  Archaea  normal  0.237578  n/a   
 
 
-
 
NC_010644  Emin_0309  short-chain dehydrogenase/reductase SDR  30.99 
 
 
249 aa  116  3e-25  Elusimicrobium minutum Pei191  Bacteria  hitchhiker  0.000668025  hitchhiker  0.00000185563 
 
 
-
 
NC_007908  Rfer_3312  short-chain dehydrogenase/reductase SDR  31.05 
 
 
260 aa  97.1  3e-19  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_002950  PG1221  short chain dehydrogenase/reductase family oxidoreductase  24.78 
 
 
241 aa  80.9  0.00000000000002  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.810471 
 
 
-
 
NC_010002  Daci_6048  short chain dehydrogenase  29.34 
 
 
266 aa  80.1  0.00000000000003  Delftia acidovorans SPH-1  Bacteria  normal  0.549002  normal 
 
 
-
 
NC_011992  Dtpsy_3487  short chain dehydrogenase  26.58 
 
 
270 aa  80.1  0.00000000000003  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8914  short-chain dehydrogenase/reductase SDR  26.81 
 
 
255 aa  77  0.0000000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.505504 
 
 
-
 
NC_008789  Hhal_1550  short-chain dehydrogenase/reductase SDR  23.98 
 
 
248 aa  76.6  0.0000000000004  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_4129  short chain dehydrogenase  25.74 
 
 
270 aa  75.5  0.0000000000007  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A2453  short chain dehydrogenase  28.69 
 
 
261 aa  75.1  0.000000000001  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  26.29 
 
 
263 aa  74.7  0.000000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_010322  PputGB1_0459  short-chain dehydrogenase/reductase SDR  28.28 
 
 
260 aa  74.3  0.000000000002  Pseudomonas putida GB-1  Bacteria  normal  normal  0.240703 
 
 
-
 
NC_002947  PP_0429  short chain dehydrogenase/reductase family oxidoreductase  28.28 
 
 
260 aa  73.6  0.000000000003  Pseudomonas putida KT2440  Bacteria  normal  normal  0.406504 
 
 
-
 
NC_009512  Pput_0462  short-chain dehydrogenase/reductase SDR  28.28 
 
 
260 aa  73.9  0.000000000003  Pseudomonas putida F1  Bacteria  normal  0.767614  hitchhiker  0.00534124 
 
 
-
 
NC_007005  Psyr_4572  Short-chain dehydrogenase/reductase SDR  27.27 
 
 
258 aa  73.2  0.000000000004  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_0498  short chain dehydrogenase  27.69 
 
 
243 aa  72.4  0.000000000006  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.795397 
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  24.71 
 
 
266 aa  72  0.000000000009  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  26.23 
 
 
266 aa  71.2  0.00000000001  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_0208  short-chain dehydrogenase/reductase SDR  27.2 
 
 
263 aa  71.2  0.00000000001  Spirosoma linguale DSM 74  Bacteria  normal  0.196422  normal 
 
 
-
 
NC_009523  RoseRS_1352  short-chain dehydrogenase/reductase SDR  26.12 
 
 
272 aa  71.2  0.00000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.15703  normal 
 
 
-
 
NC_004578  PSPTO_0601  oxidoreductase, short chain dehydrogenase/reductase family  26.88 
 
 
258 aa  70.1  0.00000000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  25.38 
 
 
264 aa  70.5  0.00000000003  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  26.75 
 
 
262 aa  70.1  0.00000000003  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_5106  Short-chain dehydrogenase/reductase SDR  25.1 
 
 
262 aa  69.3  0.00000000005  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.311622  normal  0.753041 
 
 
-
 
NC_008148  Rxyl_2452  short chain dehydrogenase  27.73 
 
 
250 aa  69.3  0.00000000005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA2567  short chain dehydrogenase  25.1 
 
 
245 aa  69.3  0.00000000006  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_3342  short-chain dehydrogenase/reductase SDR  29.19 
 
 
245 aa  68.9  0.00000000007  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.468783  n/a   
 
 
-
 
NC_007347  Reut_A0130  short chain dehydrogenase  26.02 
 
 
265 aa  68.9  0.00000000008  Ralstonia eutropha JMP134  Bacteria  normal  0.727225  n/a   
 
 
-
 
NC_013169  Ksed_12310  short-chain dehydrogenase of unknown substrate specificity  25.54 
 
 
270 aa  68.9  0.00000000008  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.3676  normal  0.223065 
 
 
-
 
NC_009524  PsycPRwf_0469  short chain dehydrogenase  29.34 
 
 
292 aa  68.6  0.0000000001  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  24.62 
 
 
264 aa  68.6  0.0000000001  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  24.62 
 
 
264 aa  68.6  0.0000000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  24.62 
 
 
264 aa  68.2  0.0000000001  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  24.62 
 
 
264 aa  68.6  0.0000000001  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  24.62 
 
 
264 aa  68.6  0.0000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_6402  short-chain dehydrogenase/reductase SDR  26.32 
 
 
277 aa  68.2  0.0000000001  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.000182624  normal 
 
 
-
 
NC_009656  PSPA7_6249  short chain dehydrogenase  27.46 
 
 
245 aa  67.8  0.0000000001  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2218  short chain dehydrogenase  25.1 
 
 
249 aa  67.8  0.0000000001  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0143  short chain dehydrogenase  27.2 
 
 
243 aa  68.2  0.0000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.896795 
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  24.62 
 
 
264 aa  67.4  0.0000000002  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_010622  Bphy_0185  short chain dehydrogenase  25.1 
 
 
256 aa  67.4  0.0000000002  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0117  short chain dehydrogenase  25.73 
 
 
250 aa  67.8  0.0000000002  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  24.24 
 
 
264 aa  67  0.0000000003  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_1201  short chain dehydrogenase  27.13 
 
 
289 aa  67  0.0000000003  Psychrobacter arcticus 273-4  Bacteria  normal  0.0718298  normal  0.0224844 
 
 
-
 
NC_011901  Tgr7_1398  short-chain dehydrogenase/reductase SDR  24.7 
 
 
249 aa  66.6  0.0000000003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.646056  n/a   
 
 
-
 
NC_009668  Oant_2951  short chain dehydrogenase  24.22 
 
 
276 aa  66.6  0.0000000003  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_1686  short-chain dehydrogenase/reductase SDR  24.23 
 
 
269 aa  66.6  0.0000000003  Spirosoma linguale DSM 74  Bacteria  normal  0.292744  normal 
 
 
-
 
NC_009074  BURPS668_0407  short chain dehydrogenase  27.09 
 
 
259 aa  67  0.0000000003  Burkholderia pseudomallei 668  Bacteria  normal  0.317505  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3096  short chain dehydrogenase  26.69 
 
 
259 aa  66.6  0.0000000004  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_5291  short chain dehydrogenase  25.59 
 
 
260 aa  66.2  0.0000000004  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0087  short chain dehydrogenase  26.69 
 
 
259 aa  66.6  0.0000000004  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2301  short chain dehydrogenase  24.19 
 
 
246 aa  66.2  0.0000000004  Pseudomonas syringae pv. syringae B728a  Bacteria  decreased coverage  0.00458311  hitchhiker  0.00750193 
 
 
-
 
NC_007434  BURPS1710b_0589  short chain dehydrogenase  26.69 
 
 
259 aa  66.6  0.0000000004  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2288  short chain dehydrogenase  26.69 
 
 
259 aa  66.6  0.0000000004  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0371  short-chain dehydrogenase/reductase SDR  26.29 
 
 
243 aa  66.6  0.0000000004  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_008836  BMA10229_A2000  short chain dehydrogenase  26.69 
 
 
259 aa  66.6  0.0000000004  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_1853  short chain dehydrogenase  27.94 
 
 
249 aa  66.2  0.0000000005  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.787999  normal 
 
 
-
 
NC_008705  Mkms_4421  short chain dehydrogenase  30.21 
 
 
249 aa  66.2  0.0000000005  Mycobacterium sp. KMS  Bacteria  normal  normal  0.794825 
 
 
-
 
NC_008146  Mmcs_4335  short chain dehydrogenase  30.21 
 
 
249 aa  66.2  0.0000000005  Mycobacterium sp. MCS  Bacteria  normal  0.0693718  n/a   
 
 
-
 
NC_009077  Mjls_4715  short chain dehydrogenase  30.21 
 
 
249 aa  65.9  0.0000000006  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I0352  short chain dehydrogenase  26.69 
 
 
259 aa  65.5  0.0000000008  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_4623  short-chain dehydrogenase/reductase SDR  26.45 
 
 
265 aa  65.5  0.0000000008  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_0632  short chain dehydrogenase  26.18 
 
 
249 aa  65.5  0.0000000009  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1708  Short-chain dehydrogenase/reductase SDR  25.41 
 
 
250 aa  65.1  0.000000001  Dechloromonas aromatica RCB  Bacteria  normal  0.361807  normal 
 
 
-
 
NC_009076  BURPS1106A_0427  short chain dehydrogenase  31.29 
 
 
259 aa  65.1  0.000000001  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4209  short-chain dehydrogenase/reductase SDR  25.86 
 
 
247 aa  65.1  0.000000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.351821  normal  0.500614 
 
 
-
 
NC_007948  Bpro_4895  short chain dehydrogenase  26.86 
 
 
258 aa  64.7  0.000000001  Polaromonas sp. JS666  Bacteria  hitchhiker  0.000739396  normal 
 
 
-
 
NC_009485  BBta_3818  3-oxoacyl-[acyl-carrier-protein] reductase  28 
 
 
245 aa  63.9  0.000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0470155 
 
 
-
 
NC_011369  Rleg2_1440  short-chain dehydrogenase/reductase SDR  24.05 
 
 
277 aa  64.7  0.000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.313918 
 
 
-
 
NC_009565  TBFG_10962  short chain dehydrogenase  28.12 
 
 
253 aa  63.9  0.000000002  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.247015 
 
 
-
 
NC_008726  Mvan_4881  short chain dehydrogenase  27.13 
 
 
249 aa  63.9  0.000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.968651 
 
 
-
 
NC_007973  Rmet_0099  short chain dehydrogenase  26.29 
 
 
265 aa  63.9  0.000000002  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_1010  short-chain dehydrogenase/reductase SDR  27.24 
 
 
254 aa  63.5  0.000000003  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.904003  normal  0.571542 
 
 
-
 
NC_011725  BCB4264_A4244  oxidoreductase, short-chain dehydrogenase/reductase family  23.86 
 
 
264 aa  63.5  0.000000003  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_1619  short-chain dehydrogenase/reductase SDR  25 
 
 
277 aa  63.5  0.000000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.44916 
 
 
-
 
NC_010551  BamMC406_2834  short chain dehydrogenase  30 
 
 
257 aa  63.5  0.000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.499263 
 
 
-
 
NC_008390  Bamb_2971  short chain dehydrogenase  30 
 
 
257 aa  63.5  0.000000003  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2831  short-chain dehydrogenase/reductase SDR  24.23 
 
 
264 aa  63.2  0.000000004  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_2308  short chain dehydrogenase  29.38 
 
 
257 aa  62.8  0.000000005  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2922  short chain dehydrogenase  29.38 
 
 
257 aa  62.8  0.000000005  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
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