More than 300 homologs were found in PanDaTox collection
for query gene Swoo_0293 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010506  Swoo_0293  short chain dehydrogenase  100 
 
 
267 aa  548  1e-155  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3844  short chain dehydrogenase  71.54 
 
 
267 aa  411  1e-114  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000447473 
 
 
-
 
NC_004347  SO_0438  short chain dehydrogenase  71.05 
 
 
267 aa  411  1e-114  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_4040  short chain dehydrogenase  71.54 
 
 
267 aa  411  1e-114  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3588  short chain dehydrogenase  71.43 
 
 
267 aa  410  1e-114  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0416  short chain dehydrogenase  71.54 
 
 
267 aa  411  1e-114  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3918  short chain dehydrogenase  71.54 
 
 
267 aa  410  1e-113  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0441  short chain dehydrogenase  71.43 
 
 
267 aa  409  1e-113  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0437  short chain dehydrogenase  71.16 
 
 
267 aa  410  1e-113  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3404  short chain dehydrogenase  70.3 
 
 
267 aa  404  1.0000000000000001e-112  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_0429  short chain dehydrogenase  68.05 
 
 
267 aa  387  1e-107  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3415  short chain dehydrogenase  66.79 
 
 
268 aa  384  1e-105  Shewanella loihica PV-4  Bacteria  normal  0.560569  normal 
 
 
-
 
NC_008700  Sama_0389  short chain dehydrogenase  62.96 
 
 
270 aa  350  2e-95  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3968  short chain dehydrogenase  47.27 
 
 
269 aa  244  9e-64  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0231224  normal  0.018096 
 
 
-
 
NC_011884  Cyan7425_1902  short chain dehydrogenase  48.06 
 
 
269 aa  241  1e-62  Cyanothece sp. PCC 7425  Bacteria  normal  0.0327948  normal 
 
 
-
 
NC_007948  Bpro_3168  short chain dehydrogenase  44.19 
 
 
270 aa  221  8e-57  Polaromonas sp. JS666  Bacteria  normal  0.273274  normal  0.685188 
 
 
-
 
NC_007347  Reut_A1414  short chain dehydrogenase  41.6 
 
 
270 aa  203  3e-51  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_1686  short-chain dehydrogenase/reductase SDR  40 
 
 
269 aa  199  5e-50  Spirosoma linguale DSM 74  Bacteria  normal  0.292744  normal 
 
 
-
 
NC_009668  Oant_2951  short chain dehydrogenase  41.54 
 
 
276 aa  199  5e-50  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_3027  short-chain dehydrogenase/reductase SDR  38.61 
 
 
272 aa  186  4e-46  Pedobacter heparinus DSM 2366  Bacteria  normal  hitchhiker  0.00333155 
 
 
-
 
NC_013132  Cpin_4665  short-chain dehydrogenase/reductase SDR  35.97 
 
 
266 aa  181  1e-44  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.871012  hitchhiker  0.000000000383418 
 
 
-
 
NC_011693  PHATRDRAFT_16295  predicted protein  41.3 
 
 
237 aa  178  1e-43  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.0303319  n/a   
 
 
-
 
NC_013037  Dfer_2713  short-chain dehydrogenase/reductase SDR  34.6 
 
 
266 aa  166  2.9999999999999998e-40  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3735  short chain dehydrogenase  37.11 
 
 
281 aa  160  1e-38  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_1995  3-ketoacyl-(acyl-carrier-protein) reductase  38.98 
 
 
239 aa  154  2e-36  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  5.591310000000001e-44 
 
 
-
 
NC_003909  BCE_2044  3-ketoacyl-(acyl-carrier-protein) reductase  38.98 
 
 
242 aa  154  2e-36  Bacillus cereus ATCC 10987  Bacteria  normal  0.252391  n/a   
 
 
-
 
NC_009674  Bcer98_1494  3-ketoacyl-(acyl-carrier-protein) reductase  38.14 
 
 
239 aa  154  2e-36  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.000128809  n/a   
 
 
-
 
NC_005945  BAS1819  3-ketoacyl-(acyl-carrier-protein) reductase  38.98 
 
 
242 aa  154  2e-36  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1793  3-ketoacyl-(acyl-carrier-protein) reductase  38.98 
 
 
242 aa  154  2e-36  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.512815  n/a   
 
 
-
 
NC_011658  BCAH187_A2065  3-ketoacyl-(acyl-carrier-protein) reductase  38.98 
 
 
239 aa  154  2e-36  Bacillus cereus AH187  Bacteria  hitchhiker  0.00000861938  n/a   
 
 
-
 
NC_006274  BCZK1775  3-ketoacyl-(acyl-carrier-protein) reductase  38.98 
 
 
242 aa  154  2e-36  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1958  3-ketoacyl-(acyl-carrier-protein) reductase  38.98 
 
 
242 aa  154  2e-36  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3364  3-ketoacyl-(acyl-carrier-protein) reductase  38.98 
 
 
239 aa  154  2e-36  Bacillus cereus G9842  Bacteria  normal  0.115947  hitchhiker  0.00000000000000894376 
 
 
-
 
NC_011725  BCB4264_A1964  3-ketoacyl-(acyl-carrier-protein) reductase  38.98 
 
 
239 aa  154  2e-36  Bacillus cereus B4264  Bacteria  normal  0.130885  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1826  3-ketoacyl-(acyl-carrier-protein) reductase  38.56 
 
 
239 aa  152  5.9999999999999996e-36  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_1684  short-chain dehydrogenase/reductase SDR  38.7 
 
 
263 aa  147  1.0000000000000001e-34  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_12680  short chain dehydrogenase  35.29 
 
 
278 aa  147  3e-34  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_0208  short-chain dehydrogenase/reductase SDR  34.77 
 
 
263 aa  145  6e-34  Spirosoma linguale DSM 74  Bacteria  normal  0.196422  normal 
 
 
-
 
NC_013132  Cpin_6402  short-chain dehydrogenase/reductase SDR  31.92 
 
 
277 aa  141  9.999999999999999e-33  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.000182624  normal 
 
 
-
 
NC_013730  Slin_2186  short-chain dehydrogenase/reductase SDR  39 
 
 
248 aa  139  4.999999999999999e-32  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.0361624 
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  34.57 
 
 
264 aa  139  7e-32  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_010338  Caul_0159  short-chain dehydrogenase/reductase SDR  38.17 
 
 
249 aa  138  7e-32  Caulobacter sp. K31  Bacteria  normal  0.410897  normal  0.168063 
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  34.7 
 
 
264 aa  137  1e-31  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  34.7 
 
 
264 aa  137  1e-31  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_0379  short-chain dehydrogenase/reductase SDR  30.8 
 
 
262 aa  137  1e-31  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  34.7 
 
 
264 aa  137  1e-31  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  39.47 
 
 
264 aa  136  4e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_3000  short-chain dehydrogenase/reductase SDR  42.41 
 
 
241 aa  136  4e-31  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  39.47 
 
 
264 aa  136  4e-31  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  34.2 
 
 
264 aa  135  8e-31  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_5037  3-ketoacyl-(acyl-carrier-protein) reductase  33.76 
 
 
238 aa  134  9.999999999999999e-31  Flavobacterium johnsoniae UW101  Bacteria  normal  0.293143  n/a   
 
 
-
 
NC_013159  Svir_33490  short-chain alcohol dehydrogenase  38.07 
 
 
247 aa  134  9.999999999999999e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.343117  normal  0.392445 
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  34.33 
 
 
264 aa  133  3e-30  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_013061  Phep_4049  3-ketoacyl-(acyl-carrier-protein) reductase  35.44 
 
 
238 aa  133  3.9999999999999996e-30  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B0992  oxidoreductase, short-chain dehydrogenase/reductase family  33.46 
 
 
264 aa  131  9e-30  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A4244  oxidoreductase, short-chain dehydrogenase/reductase family  33.46 
 
 
264 aa  131  1.0000000000000001e-29  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0808  short-chain dehydrogenase/reductase SDR  36.73 
 
 
252 aa  129  7.000000000000001e-29  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0458  short-chain dehydrogenase/reductase SDR  39.8 
 
 
257 aa  128  8.000000000000001e-29  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.706164 
 
 
-
 
NC_013132  Cpin_1337  3-ketoacyl-(acyl-carrier-protein) reductase  35.24 
 
 
238 aa  128  9.000000000000001e-29  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.541378  normal 
 
 
-
 
NC_011729  PCC7424_0488  short-chain dehydrogenase/reductase SDR  31.92 
 
 
261 aa  127  2.0000000000000002e-28  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_010172  Mext_1014  short-chain dehydrogenase/reductase SDR  35.41 
 
 
336 aa  127  2.0000000000000002e-28  Methylobacterium extorquens PA1  Bacteria  normal  0.264982  normal 
 
 
-
 
NC_010581  Bind_2990  short-chain dehydrogenase/reductase SDR  37.57 
 
 
336 aa  127  3e-28  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.753592 
 
 
-
 
NC_009674  Bcer98_2831  short-chain dehydrogenase/reductase SDR  36.84 
 
 
264 aa  126  4.0000000000000003e-28  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_2906  short-chain dehydrogenase/reductase SDR  38.1 
 
 
258 aa  126  4.0000000000000003e-28  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_011757  Mchl_0762  short-chain dehydrogenase/reductase SDR  35.02 
 
 
336 aa  125  7e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_013743  Htur_3538  short-chain dehydrogenase/reductase SDR  35.02 
 
 
248 aa  125  8.000000000000001e-28  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_007413  Ava_0943  Short-chain dehydrogenase/reductase SDR  31.18 
 
 
293 aa  125  8.000000000000001e-28  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0451  short-chain dehydrogenase/reductase SDR  34.03 
 
 
339 aa  125  9e-28  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011894  Mnod_7667  short-chain dehydrogenase/reductase SDR  32.95 
 
 
332 aa  125  9e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.755346  n/a   
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  38.02 
 
 
264 aa  124  1e-27  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_010725  Mpop_1326  short-chain dehydrogenase/reductase SDR  35.16 
 
 
336 aa  124  1e-27  Methylobacterium populi BJ001  Bacteria  normal  0.945072  normal  0.131603 
 
 
-
 
NC_007760  Adeh_3217  short-chain dehydrogenase/reductase SDR  39.9 
 
 
253 aa  124  1e-27  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1081  3-ketoacyl-(acyl-carrier-protein) reductase  33.76 
 
 
246 aa  125  1e-27  Geobacillus sp. WCH70  Bacteria  normal  0.46401  n/a   
 
 
-
 
NC_007517  Gmet_2194  Short-chain dehydrogenase/reductase SDR  33.65 
 
 
255 aa  124  2e-27  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00000131904  normal  0.0140674 
 
 
-
 
NC_009524  PsycPRwf_0093  short-chain dehydrogenase/reductase SDR  31.32 
 
 
266 aa  124  2e-27  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11271  short-chain type dehydrogenase/reductase  33.97 
 
 
276 aa  123  3e-27  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000317139  hitchhiker  0.0033897 
 
 
-
 
NC_009674  Bcer98_1043  acetoacetyl-CoA reductase  36.27 
 
 
247 aa  123  3e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.8589  n/a   
 
 
-
 
NC_011679  PHATR_36881  2-deoxy-D-gluconate 3-dehydrogenase  31.85 
 
 
308 aa  122  6e-27  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.804236  n/a   
 
 
-
 
NC_012848  Rleg_4853  short-chain dehydrogenase/reductase SDR  36.32 
 
 
248 aa  122  8e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.154391  normal  0.241568 
 
 
-
 
NC_009832  Spro_3865  short-chain dehydrogenase/reductase SDR  36.68 
 
 
247 aa  121  9e-27  Serratia proteamaculans 568  Bacteria  normal  0.269971  normal 
 
 
-
 
NC_013745  Htur_4446  short-chain dehydrogenase/reductase SDR  31.92 
 
 
254 aa  121  9.999999999999999e-27  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.287432  n/a   
 
 
-
 
NC_009674  Bcer98_2729  3-hydroxybutyrate dehydrogenase  36.84 
 
 
258 aa  121  9.999999999999999e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.131703  n/a   
 
 
-
 
NC_007498  Pcar_1438  3-oxoacyl-(acyl-carrier-protein) reductase  34.13 
 
 
245 aa  120  1.9999999999999998e-26  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_010085  Nmar_1786  short-chain dehydrogenase/reductase SDR  37.56 
 
 
246 aa  120  1.9999999999999998e-26  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_013385  Adeg_0958  3-oxoacyl-(acyl-carrier-protein) reductase  36.84 
 
 
247 aa  120  3e-26  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7039  Short-chain dehydrogenase/reductase SDR  35.96 
 
 
258 aa  120  3e-26  Burkholderia sp. 383  Bacteria  normal  normal  0.607221 
 
 
-
 
NC_010511  M446_1704  short-chain dehydrogenase/reductase SDR  31.54 
 
 
327 aa  120  3e-26  Methylobacterium sp. 4-46  Bacteria  normal  0.151565  normal 
 
 
-
 
NC_010725  Mpop_1331  short-chain dehydrogenase/reductase SDR  35.22 
 
 
332 aa  119  3.9999999999999996e-26  Methylobacterium populi BJ001  Bacteria  normal  0.261589  normal  0.281891 
 
 
-
 
NC_005945  BAS3941  3-hydroxybutyrate dehydrogenase  35.26 
 
 
258 aa  119  4.9999999999999996e-26  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4249  3-hydroxybutyrate dehydrogenase  35.26 
 
 
258 aa  119  4.9999999999999996e-26  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1266  short-chain dehydrogenase/reductase SDR  29.86 
 
 
278 aa  119  4.9999999999999996e-26  Pseudomonas mendocina ymp  Bacteria  normal  0.343225  normal 
 
 
-
 
NC_009972  Haur_1067  short-chain dehydrogenase/reductase SDR  38.71 
 
 
258 aa  119  4.9999999999999996e-26  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3773  3-hydroxybutyrate dehydrogenase  35.26 
 
 
258 aa  119  6e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B1101  3-hydroxybutyrate dehydrogenase  34.57 
 
 
258 aa  119  6e-26  Bacillus cereus G9842  Bacteria  normal  normal  0.845922 
 
 
-
 
NC_011773  BCAH820_4051  3-hydroxybutyrate dehydrogenase  35.26 
 
 
258 aa  119  6e-26  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011658  BCAH187_A4157  3-hydroxybutyrate dehydrogenase  35.26 
 
 
258 aa  119  7e-26  Bacillus cereus AH187  Bacteria  normal  0.212799  n/a   
 
 
-
 
NC_008025  Dgeo_2238  short-chain dehydrogenase/reductase SDR  36.12 
 
 
317 aa  119  7e-26  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1506  short-chain dehydrogenase/reductase SDR  32.96 
 
 
279 aa  118  7.999999999999999e-26  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00711463  n/a   
 
 
-
 
NC_009485  BBta_3170  putative Short-chain dehydrogenase/reductase  36.02 
 
 
544 aa  118  7.999999999999999e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0745281 
 
 
-
 
NC_011370  Rleg2_6281  short-chain dehydrogenase/reductase SDR  34.05 
 
 
264 aa  118  9e-26  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.616501 
 
 
-
 
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