Gene Rxyl_2452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2452 
Symbol 
ID4115521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2465606 
End bp2466358 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content74% 
IMG OID638037232 
Productshort chain dehydrogenase 
Protein accessionYP_645191 
Protein GI108805254 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCCCGC GCCGGAACAT CCTCATCACC GGCGCGAGCT CCGGCCTCGG GTGGGGGATG 
GCCCGCGAGT TCGCCGCCCG GGGCCGCAAC CTCGCCCTCT GCGCCCGCCG CCTCGACCGG
CTCGAGGGGC TCAGAGAGGA GCTCGCGGCG CGGTACCCCT CCCTCCGCGT CGCCGTCCGC
CGGCTCGACG TGAACGACCA CGAGGAGGTC TTCCGCGCCT TCCGCGAGCT GGACGCCGGG
CTCGGCGGGC TCGACCGCGT GGTCGTGAAC GCCGGGCTCG GCAAGGGCCG GCCCCTCGGG
ACCGGCCACT TCCGGGCGAA CCGCGAGACG ATCGAGACGA ACCTCGTCGC GGCCCTGGCC
CAGTGTGAGG CGGCGATGGA GCTCTTCCGC GAGCGAAACG CCGGACACCT GGTCGTGATC
TCCTCGGTCG CCGCCGTGCG GGGGCTCCCG GGGAACATGG GCGCCTACTC GGCCTCGAAG
GCCGGCCTCG CCGCGCTCGC CGAGGGCCTC CGCGCCGACG TCCACGGCAC CCCCATCCGG
ATCAGCACGA TCTTCCCGGG CTACGTCCGC ACGGAGATGA ACGAGCGGGC GGGCAGGATG
CCGTTCGCGG TCGGCGAGGA GAAGGGCTCG CGCCTGCTCG CCGAAGCGAT AGAGCGCGAG
CCCCGGAGGG CCTACGTTCC CTTCTGGCCC TGGCGACCCC TCAGCCTCTT TCTGCGCTTT
CTCCCGGAGG GCTGGCTGGC GAGGGTCTCG TAG
 
Protein sequence
MPPRRNILIT GASSGLGWGM AREFAARGRN LALCARRLDR LEGLREELAA RYPSLRVAVR 
RLDVNDHEEV FRAFRELDAG LGGLDRVVVN AGLGKGRPLG TGHFRANRET IETNLVAALA
QCEAAMELFR ERNAGHLVVI SSVAAVRGLP GNMGAYSASK AGLAALAEGL RADVHGTPIR
ISTIFPGYVR TEMNERAGRM PFAVGEEKGS RLLAEAIERE PRRAYVPFWP WRPLSLFLRF
LPEGWLARVS