Gene Emin_0309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0309 
Symbol 
ID6263718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp330544 
End bp331293 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content38% 
IMG OID642610774 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001875206 
Protein GI187250724 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000668025 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00000185563 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAAGAT CTAAAAATAT ACTTATAATA GGCGCAACCT CAGGTATAGG AAGAGAAGTC 
GCCTTACAAT ATTTATCCCT CGGCGCAAAA GTTGCCGTTA CGGGAAGAAG GCAGGAGCTG
CTTGCCTCAC TAAAACAAAC CGCGCCTGAG AGAGTGTTTA CTTTTGTTAA TGACGTAACA
CAAACAAAAG CGTCCGAGCT TATAAAAGAA ATACATAATC AAATGGGCGA TATTGACACT
ATTTTAGTAT GTTCGGGAAT GGGTGACATA AATTTAAAAT TAGAAAACGA TATTGAATTA
AATACAGCGC GCACAAACGT GCTTGGCTTT ACCGATTGGA TTATAGAAGG GTACAAATAT
TTTGAGGAAC GTTTTGAGCG CACGGGTAAA GGCGCAAGGT TAAGCGCTGT TTCAAGCATA
GCGTCTTTTA GCGGTTCGGA CGCGGCGCCC GCATATTTTG CCAGCAAAGC TTATATAAGC
AATTATTTGG AAGGTCTTAG AAAAAAGTCA GTTAAAATAA AAAAGCCTGT TTACGTAACA
ACCATAATAC CCGGCTTTGT AGATACCGCT TTGGCAAAAG GAGTGGGCGG CAAAGGTTTA
TTTTGGGTAG CGTCCGCCGA AAAGGCTGCA AAACAAATAC TTAACGCTTT AGACAAAAGG
AAAAAGATTG TTTATGTAAC AAAAAGATGG CGTTTTATTG CTTTTATATT AAAAGTTATA
CCTGATTTTG TTTATAACAG ATTTTATTAA
 
Protein sequence
MERSKNILII GATSGIGREV ALQYLSLGAK VAVTGRRQEL LASLKQTAPE RVFTFVNDVT 
QTKASELIKE IHNQMGDIDT ILVCSGMGDI NLKLENDIEL NTARTNVLGF TDWIIEGYKY
FEERFERTGK GARLSAVSSI ASFSGSDAAP AYFASKAYIS NYLEGLRKKS VKIKKPVYVT
TIIPGFVDTA LAKGVGGKGL FWVASAEKAA KQILNALDKR KKIVYVTKRW RFIAFILKVI
PDFVYNRFY