| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1974 |
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| Symbol | |
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| ID | 5053973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 2043247 |
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| End bp | 2044023 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640472149 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001156750 |
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| Protein GI | 145590153 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCAAA AAGGAGTTGA TCAGTTTGCC AGCAAACGGG TTTGGATTAT TGGCGCCTCC
AGCGGTATTG GTGAAGCTTG CGCTAAAGCC CTCATCCAAG CAGGTGCAAA GGTAGCTCTT
TCGAGCAGAC GAGTAGAACG ATTAAATGTC ATTGCTCAAT CCGCCTCCAC AAATCAGGCT
TTAGTTTTTC CCTTAGACGT CACCCAAACA GATCAATTAA AAGCAGCTTA CGATTGCATT
CTGAATGGCT GGGGTGGAAT TGATATTTTG CTATTTGTAT CGGGCATGTA TGTTCCTCTG
CGTGCTGATC AATTTGATTT CCAGATAGCC GAGCAAACGA TTGATGCCAA TTTACTTGGT
CCGATGCGCG CAGTATCTCT TGTACTTCCT GAAATGCTCA AAGCACATAG TGGGCATATC
GCCATCGTTG GCAGTGTTGC AGGCTATAGC GGACTGCCTA AAGCCCTTGC CTATGGGCCA
AGTAAAGCCG CCATCATTAA TTTCTGTGAG AATTTGTATT ACGACTTACT GCCAGAAGGC
GTAAGCGTTC ATATGATTTC TCCTGGATTT GTGGCTACCG AGGCAACCGC TCAAAATGAC
TTTGAAATGC CTGCCTTAAT AAGTGCCGAA GAAGCTGCAA ATGAAATACT GAAGGGGATA
CAAGAAGGTG AATTTGATAT TCACTTCCCT AAACGATTTT CAAGATTCTT GAAGTTTCTC
AGAATCCTGC CTTACCCAGT GTATTTTTGG ATTGTGCGCC GCTTTGTCAA AATCTAA
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| Protein sequence | MRQKGVDQFA SKRVWIIGAS SGIGEACAKA LIQAGAKVAL SSRRVERLNV IAQSASTNQA
LVFPLDVTQT DQLKAAYDCI LNGWGGIDIL LFVSGMYVPL RADQFDFQIA EQTIDANLLG
PMRAVSLVLP EMLKAHSGHI AIVGSVAGYS GLPKALAYGP SKAAIINFCE NLYYDLLPEG
VSVHMISPGF VATEATAQND FEMPALISAE EAANEILKGI QEGEFDIHFP KRFSRFLKFL
RILPYPVYFW IVRRFVKI
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