| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0327 |
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| Symbol | |
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| ID | 5053317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 321841 |
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| End bp | 322590 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640470479 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001155112 |
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| Protein GI | 145588515 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.726547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACAATA CAAAACGAAT TGCCATTATT GGGGCTACTT CATCTATAGC TGAGCATTGC
GCAAGAATAT GGGCACAACA AGGTTCAGTA GAATTAATTT TGGTTGGTAG GGATCAGCGA
AAATTAGAGA TAGTCGCCGC TGACTTGCTA GTGAGATCAC AAAACACAAA AATAGAAATA
GTGGTGACTG ATTTTATCGA CCCAACTGCC ATTCAAAATA CAGTTGATGC TCTATTTACA
TTTCAACCAA TCGATATTGC CTTAATTGCA CACGGAACGC TTCCAGAGCA ACAGGATTGT
CAGAGTAATT TAGGGTTAAA TTACAGCACC TTAGAAATTA ATGGAATTTC CCCAGTGCTC
TATGCAGAAG CCTTTGCCCA ACATATGACC AAACTAAATC AAGGCTCTAT TGCCATTATT
GGTTCTGTTG CAGGCGATCG CGGACGTAAA TCAAACTATG TTTATGGAGC CGCGAAAGGT
CTAGTGACGA GATACGCGCA AGGATTACAA CACCGCTTTG CAGGAACTGG GGTTAATGTC
TCACTCATTA AACCAGGCCC AACCAATACA CCTATGACTG CGGCGATGAA AGGTAGCGAG
AAATTTGCGA CGCCAGAAGA AGTCGCCAAA ACTATAACTG CAGGAATTGA ATCCAAGAAA
GCGGTAATTT ATGCACCTGC TAAATGGTGG CTAATTATGA TGGTCATACG ACATCTTCCA
AGTCTCATTT TTAACAAGAT GAACATCTAG
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| Protein sequence | MNNTKRIAII GATSSIAEHC ARIWAQQGSV ELILVGRDQR KLEIVAADLL VRSQNTKIEI
VVTDFIDPTA IQNTVDALFT FQPIDIALIA HGTLPEQQDC QSNLGLNYST LEINGISPVL
YAEAFAQHMT KLNQGSIAII GSVAGDRGRK SNYVYGAAKG LVTRYAQGLQ HRFAGTGVNV
SLIKPGPTNT PMTAAMKGSE KFATPEEVAK TITAGIESKK AVIYAPAKWW LIMMVIRHLP
SLIFNKMNI
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