Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1522 |
Symbol | |
ID | 5753254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 1834158 |
End bp | 1834901 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641287794 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001553955 |
Protein GI | 160874639 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0183678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.814955 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAAG CAACTGCAAT AATTGTGGGA GCTAGCTCAC AATTAAGTCG TGAAATTGCA AAGCAATTGG CAGATCAACA GGTTGAATTA GTCTTATTCG CCCAAGATCC AGAATCACTC CGCGATTTTG CCTTATCCTT GCCAACTAAA GTACAAGTAT TTTCACTTCA AATTGAACAG CCTCAAGCCA TTATCACTCA ACTTGAATCC GTCTGGCAGA GTCTTGGCGG TGCGCACTTA GTCTTAGTCA ATACAGGCCT CAATAGTTAT GATCCTGAGC TGCCTTGGCT GCCAGAGCAA GACATTATCG ATGTCAATGT GCGAGGTTTT GCCGCTATCT GCAATACGGC ATTTAGACTA TTTCGCGAGC AAGGTTATGG ACAACTGGCG GCAATAAACT CTGTCGCAGG TTTGCGCGGT GGCCCAAGTG TGGCCTATCA CGCCTCAAAA GCCTTTGGGC AGAATTACCT TGAGGGCTTA TGTATGCACG CCCAGCGCCT CAAGTTACCC ATTACGATTA CCGATATCCA ACTCGGTTTA CTCGATAAAG CCGCCATGCA GCAAAGTGCG ATGTGGCTTG CCCCATTACC GCACGTTGCA GCACAGATCA TCAAAGCAAT GAAGCAAGGT AAACGCCGCG TCTATGTGAC TAAACGCTGG CGCCTCGTCG CTTGGCTCAC CGTATTATTA CCCGAATTTA TCTATAACAC TCGCCACTGG AAGGCTAAAA AGCCAAAGCG CTAA
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Protein sequence | MTQATAIIVG ASSQLSREIA KQLADQQVEL VLFAQDPESL RDFALSLPTK VQVFSLQIEQ PQAIITQLES VWQSLGGAHL VLVNTGLNSY DPELPWLPEQ DIIDVNVRGF AAICNTAFRL FREQGYGQLA AINSVAGLRG GPSVAYHASK AFGQNYLEGL CMHAQRLKLP ITITDIQLGL LDKAAMQQSA MWLAPLPHVA AQIIKAMKQG KRRVYVTKRW RLVAWLTVLL PEFIYNTRHW KAKKPKR
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