| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A4248 |
|---|
| Symbol | |
|---|
| ID | 4004018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 248577 |
|---|
| End bp | 249356 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637945403 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_556804 |
|---|
| Protein GI | 91781598 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.215124 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCAC CGTTGAAGGT TTTCATTACC GGCGCCTCGA GCGGCATCGG CCTCGCGCTC
GCGGCCGAAT ATGCGCGGCG CGGCGCGGTT CTCGGCCTCG TGGCCCGCCG CGGCGACGCC
CTCGCCGCCT TCCAGCAGTC CCATCCGCAG AGCACCGTCT CCACCTATTC CGTCGACGTT
CGCGACGCCG AAGCGCTCGC CGACGCGGCC GCGCAATTCA TCGCGCAGCA CGGCTTGCCG
GACGTCGTGA TCGCCAACGC CGGCGTCAGC CGCGGTGCGG TCACCGGCCA CGGCGACCTG
CGCACCTTCC GCGAAGTGAT GGATATCAAC TACTTCGGCA TGGTCGCCAC GTTCGAGCCA
TTCGCCGCCG CGATGAGCGC CGCGAGACAC GGCACGCTGG TGGGAATCGC CAGCGTCGCC
GGTGTGCGCG GCTTGCCGGG CTCCGGCGCG TACAGCGCGT CGAAATCGGC GGCGCTCAAG
TATCTGGAAG CGTTGCGCGT CGAAATGCGG CCGCACGGCG TCGGCGTGGT CACCATTGCG
CCCGGCTATA TCCGCACGCC CATGACCGAG CACAACCCAT ACACCATGCC GTTCCTGATG
GATGCCGACC GTTTCGCCGT GAAGGTGGCG CAGGCAATCG AGCGTCAAAC GGCCTTCGCG
GTGTTCCCCT GGCAGATGCG CATCGTGGCC ATGCTGCTGC ATGTGCTGCC GCGCTGGCTC
TACGACCGTG CGTTCGAGCG CGCGCCGCGC AAGCCGCGCA CCGCCGCCGA GGTCGAGTAA
|
|---|
| Protein sequence | MSSPLKVFIT GASSGIGLAL AAEYARRGAV LGLVARRGDA LAAFQQSHPQ STVSTYSVDV
RDAEALADAA AQFIAQHGLP DVVIANAGVS RGAVTGHGDL RTFREVMDIN YFGMVATFEP
FAAAMSAARH GTLVGIASVA GVRGLPGSGA YSASKSAALK YLEALRVEMR PHGVGVVTIA
PGYIRTPMTE HNPYTMPFLM DADRFAVKVA QAIERQTAFA VFPWQMRIVA MLLHVLPRWL
YDRAFERAPR KPRTAAEVE
|
|---|
| |