| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2553 |
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| Symbol | |
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| ID | 4921093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3009796 |
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| End bp | 3010566 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640164147 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001094678 |
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| Protein GI | 127513481 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAAG CTACTGCAAT AATTGTGGGC GCCAGCTCAC TCGTTAGTCG TGAAATTGCC
AAACAACTTG CCGAGCAAGG CGTCGAACTG GCCCTGCTGG CACAAGATAC CGAATCCCTT
AAGGAATTTT CTCAGTCTCT GCCTACCCAG GTCAGCCTAC ATGAGCTGGC GATAGAGAGA
CCAAAGGATA TCATCGCCAC CCTGGAAAGC ATCTGGCAGC AACTGGGCGG CGCCCATCTG
GTGATCGTCA ATACCGGCCT CAATGGCTAT GACGCCTCCC TGCCCTGGCA ACTGGAACAG
GATATTATTA CCGTCAATGT GCAGGGCTAT AGCGCCATAT GCAATACGGC ATTCAGACTA
TTTGTCGATC AAGGCTATGG CCAGCTTGCC GCCATTAACT CCATCGCCGG ACTGAGGGGC
GGCCCCAGCG TGGCCTATCA TGCCTCCAAG GCCTATGCCA GCAGCTACCT CGAAGGGCTG
AGCATGCATG CCCAGCGCCT CAAGCTGCCG ATCACCATTA GCGATCTTCA GCTTGGTCTG
CTGGACAAGG CGGCCATGCA GCAGAGCCGT CTCTGGCTAT CACCACCCCA TGAGGTGGCG
CGCCAGGCAC TCAAAGCGAT GCAGAAAGGT AAGCGCCGCG CCTATATCAC CAAGCGTTGG
CGTCTGGTGG CCTGGTTAAC CAAGCTGCTG CCTGAATTTA TCTACAACAC GCGTCACTGG
CGTACCAAGG AAGAGCGCAA GGCGGCCAGA GCGGCCAAGA AGGCCCAATA G
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| Protein sequence | MSQATAIIVG ASSLVSREIA KQLAEQGVEL ALLAQDTESL KEFSQSLPTQ VSLHELAIER
PKDIIATLES IWQQLGGAHL VIVNTGLNGY DASLPWQLEQ DIITVNVQGY SAICNTAFRL
FVDQGYGQLA AINSIAGLRG GPSVAYHASK AYASSYLEGL SMHAQRLKLP ITISDLQLGL
LDKAAMQQSR LWLSPPHEVA RQALKAMQKG KRRAYITKRW RLVAWLTKLL PEFIYNTRHW
RTKEERKAAR AAKKAQ
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