More than 300 homologs were found in PanDaTox collection
for query gene Dbac_2269 on replicon NC_013173
Organism: Desulfomicrobium baculatum DSM 4028



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013173  Dbac_2269  response regulator receiver protein  100 
 
 
130 aa  261  2e-69  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.740525  n/a   
 
 
-
 
NC_008751  Dvul_0407  response regulator receiver protein  59.32 
 
 
128 aa  144  4.0000000000000006e-34  Desulfovibrio vulgaris DP4  Bacteria  normal  0.627834  normal  0.12665 
 
 
-
 
NC_011769  DvMF_1769  response regulator receiver protein  58.47 
 
 
129 aa  142  2e-33  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007519  Dde_0321  response regulator receiver domain-containing protein  55.83 
 
 
122 aa  135  2e-31  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0654  response regulator receiver protein  51.75 
 
 
413 aa  118  3e-26  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.113697  normal 
 
 
-
 
NC_008554  Sfum_0656  response regulator receiver protein  44.26 
 
 
129 aa  115  1.9999999999999998e-25  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.663964  normal 
 
 
-
 
NC_007519  Dde_0328  response regulator receiver domain-containing protein  52.34 
 
 
406 aa  114  3e-25  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.918345  n/a   
 
 
-
 
NC_009943  Dole_2335  response regulator receiver protein  50 
 
 
411 aa  114  6.9999999999999995e-25  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000388714  n/a   
 
 
-
 
NC_008554  Sfum_0652  response regulator receiver protein  50 
 
 
122 aa  112  2.0000000000000002e-24  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.429078  normal 
 
 
-
 
NC_013173  Dbac_1807  response regulator receiver protein  46.61 
 
 
139 aa  110  4.0000000000000004e-24  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0816  response regulator receiver protein  53.15 
 
 
157 aa  110  6e-24  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0324  response regulator receiver domain-containing protein  48.67 
 
 
127 aa  110  8.000000000000001e-24  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.581793  n/a   
 
 
-
 
NC_011883  Ddes_0814  response regulator receiver protein  47.9 
 
 
132 aa  110  8.000000000000001e-24  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1772  response regulator receiver protein  48.36 
 
 
151 aa  110  1.0000000000000001e-23  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_0404  response regulator receiver protein  46.72 
 
 
151 aa  109  2.0000000000000002e-23  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.134088 
 
 
-
 
NC_013173  Dbac_2271  response regulator receiver protein  42.86 
 
 
127 aa  107  5e-23  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.420434  n/a   
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  42.5 
 
 
151 aa  106  8.000000000000001e-23  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0632  response regulator receiver protein  46.61 
 
 
135 aa  105  2e-22  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2037  response regulator receiver protein  47.41 
 
 
120 aa  105  3e-22  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1351  response regulator receiver protein  45.38 
 
 
141 aa  103  6e-22  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000171187  n/a   
 
 
-
 
NC_008751  Dvul_0403  response regulator receiver sensor signal transduction histidine kinase  46.85 
 
 
374 aa  102  2e-21  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.150899 
 
 
-
 
NC_011769  DvMF_1773  response regulator receiver sensor signal transduction histidine kinase  46.02 
 
 
408 aa  101  4e-21  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_2272  response regulator receiver sensor signal transduction histidine kinase  44.25 
 
 
382 aa  99  2e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.275022  n/a   
 
 
-
 
NC_008554  Sfum_0618  response regulator receiver protein  42.5 
 
 
157 aa  98.6  2e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1360  response regulator receiver sensor signal transduction histidine kinase  44.14 
 
 
403 aa  99  2e-20  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  44.54 
 
 
144 aa  97.8  4e-20  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_013173  Dbac_0314  response regulator receiver protein  44.83 
 
 
131 aa  97.4  6e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0234873  n/a   
 
 
-
 
NC_007519  Dde_0695  response regulator receiver domain-containing protein  45.3 
 
 
141 aa  97.1  7e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.396926  n/a   
 
 
-
 
NC_011769  DvMF_1991  response regulator receiver protein  42.74 
 
 
153 aa  95.5  2e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  41.74 
 
 
121 aa  95.1  2e-19  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1361  response regulator receiver protein  45.3 
 
 
147 aa  94.4  4e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0018  response regulator receiver protein  40.5 
 
 
135 aa  94  6e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  decreased coverage  0.00000218096  n/a   
 
 
-
 
NC_009943  Dole_1350  response regulator receiver protein  39.83 
 
 
147 aa  94  6e-19  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00189482  n/a   
 
 
-
 
NC_007298  Daro_1804  two component, sigma54 specific, Fis family transcriptional regulator  36.59 
 
 
469 aa  93.6  8e-19  Dechloromonas aromatica RCB  Bacteria  normal  0.0358984  normal  0.379225 
 
 
-
 
NC_013173  Dbac_2042  response regulator receiver protein  43.59 
 
 
147 aa  93.2  1e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1352  response regulator receiver protein  43.48 
 
 
139 aa  91.3  4e-18  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00001959  n/a   
 
 
-
 
NC_012918  GM21_1405  two component, sigma54 specific, transcriptional regulator, Fis family  38.89 
 
 
478 aa  91.3  4e-18  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000117702 
 
 
-
 
NC_011146  Gbem_2805  two component, sigma54 specific, transcriptional regulator, Fis family  38.89 
 
 
478 aa  90.9  5e-18  Geobacter bemidjiensis Bem  Bacteria  normal  0.228775  n/a   
 
 
-
 
NC_009943  Dole_1362  response regulator receiver protein  38.6 
 
 
159 aa  90.5  6e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0692  response regulator receiver domain-containing protein  39.67 
 
 
145 aa  90.1  8e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.000176776  n/a   
 
 
-
 
NC_008554  Sfum_0636  response regulator receiver protein  40.98 
 
 
124 aa  90.5  8e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.621219  normal 
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  40.17 
 
 
142 aa  90.1  9e-18  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_008752  Aave_0872  two component, sigma54 specific, Fis family transcriptional regulator  39.13 
 
 
471 aa  89  2e-17  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0650247 
 
 
-
 
NC_013173  Dbac_0313  response regulator receiver protein  40.16 
 
 
143 aa  89.4  2e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0254543  n/a   
 
 
-
 
NC_010322  PputGB1_4009  two component transcriptional regulator  39.25 
 
 
225 aa  88.2  3e-17  Pseudomonas putida GB-1  Bacteria  normal  0.597595  hitchhiker  0.0000110419 
 
 
-
 
NC_007955  Mbur_0695  response regulator receiver  41.67 
 
 
170 aa  88.6  3e-17  Methanococcoides burtonii DSM 6242  Archaea  normal  0.412637  n/a   
 
 
-
 
NC_007492  Pfl01_1483  two component transcriptional regulator  39.25 
 
 
225 aa  87.8  4e-17  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0288957  normal  0.134739 
 
 
-
 
NC_011769  DvMF_1988  response regulator receiver protein  39.66 
 
 
119 aa  88.2  4e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013385  Adeg_0532  two component, sigma54 specific, transcriptional regulator, Fis family  39.5 
 
 
470 aa  88.2  4e-17  Ammonifex degensii KC4  Bacteria  hitchhiker  0.00706375  n/a   
 
 
-
 
NC_012791  Vapar_0965  putative two component, sigma54 specific, transcriptional regulator, Fis family  35.38 
 
 
462 aa  87.4  5e-17  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_4150  response regulator receiver protein  36.67 
 
 
125 aa  87.8  5e-17  Polaromonas sp. JS666  Bacteria  normal  normal  0.583085 
 
 
-
 
NC_011883  Ddes_1566  response regulator receiver protein  38.66 
 
 
126 aa  87  8e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_15610  Response regulator, transciptional regulatory protein  36.89 
 
 
225 aa  87  8e-17  Azotobacter vinelandii DJ  Bacteria  normal  0.0572115  n/a   
 
 
-
 
NC_002947  PP_4503  winged helix family two component transcriptional regulator  39.25 
 
 
225 aa  86.3  1e-16  Pseudomonas putida KT2440  Bacteria  normal  0.0390062  normal 
 
 
-
 
NC_003910  CPS_4272  sigma-54 dependent response regulator  32.2 
 
 
457 aa  86.3  1e-16  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2034  response regulator receiver protein  39.5 
 
 
300 aa  86.7  1e-16  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_1408  two component transcriptional regulator  39.25 
 
 
225 aa  86.3  1e-16  Pseudomonas putida F1  Bacteria  normal  0.0248977  normal 
 
 
-
 
NC_013501  Rmar_0987  two component transcriptional regulator, winged helix family  39.81 
 
 
233 aa  86.7  1e-16  Rhodothermus marinus DSM 4252  Bacteria  normal  0.195539  n/a   
 
 
-
 
NC_010501  PputW619_3792  two component transcriptional regulator  38.32 
 
 
225 aa  85.9  2e-16  Pseudomonas putida W619  Bacteria  normal  decreased coverage  0.000000000277452 
 
 
-
 
NC_013223  Dret_2392  two component, sigma54 specific, transcriptional regulator, Fis family  40.68 
 
 
458 aa  85.5  2e-16  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0321511  normal 
 
 
-
 
NC_009921  Franean1_6496  two component transcriptional regulator  39.29 
 
 
231 aa  85.9  2e-16  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.00132974  normal  0.338684 
 
 
-
 
NC_008751  Dvul_0150  response regulator receiver protein  40.98 
 
 
134 aa  85.5  2e-16  Desulfovibrio vulgaris DP4  Bacteria  normal  0.89872  normal  0.680282 
 
 
-
 
NC_009943  Dole_1358  response regulator receiver protein  37.5 
 
 
144 aa  85.1  3e-16  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.107991  n/a   
 
 
-
 
NC_011146  Gbem_3286  two component, sigma54 specific, transcriptional regulator, Fis family  37.29 
 
 
458 aa  85.1  3e-16  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0321  two component transcriptional regulator  38.39 
 
 
406 aa  85.1  3e-16  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_2296  response regulator receiver domain-containing protein  38.68 
 
 
222 aa  85.1  3e-16  Saccharophagus degradans 2-40  Bacteria  normal  hitchhiker  0.0000621544 
 
 
-
 
NC_011369  Rleg2_3169  two component, sigma54 specific, transcriptional regulator, Fis family  36.97 
 
 
444 aa  84.7  3e-16  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.254755  normal  0.187976 
 
 
-
 
NC_008781  Pnap_3376  two component, sigma54 specific, Fis family transcriptional regulator  36.64 
 
 
462 aa  85.1  3e-16  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.193945  normal 
 
 
-
 
NC_007963  Csal_2407  two component, sigma54 specific, Fis family transcriptional regulator  36.21 
 
 
461 aa  84.7  4e-16  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2347  two component, sigma54 specific, Fis family transcriptional regulator  34.71 
 
 
450 aa  84.7  4e-16  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1886  two component, sigma54 specific, transcriptional regulator, Fis family  35.25 
 
 
461 aa  84.3  5e-16  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6147  two component transcriptional regulator, winged helix family  36.7 
 
 
244 aa  84.3  5e-16  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.200947 
 
 
-
 
NC_007760  Adeh_1992  two component, sigma54 specific, Fis family transcriptional regulator  35.25 
 
 
460 aa  84.3  5e-16  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2786  two component, sigma54 specific, Fis family transcriptional regulator  35.34 
 
 
477 aa  84.3  5e-16  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0237  response regulator receiver protein  31.71 
 
 
124 aa  84  6e-16  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000555979 
 
 
-
 
NC_012560  Avin_29000  sigma54-dependent response regulator, two-component  36.29 
 
 
472 aa  84.3  6e-16  Azotobacter vinelandii DJ  Bacteria  normal  0.99042  n/a   
 
 
-
 
NC_012918  GM21_0962  two component, sigma54 specific, transcriptional regulator, Fis family  36.44 
 
 
458 aa  84  6e-16  Geobacter sp. M21  Bacteria  n/a    normal  0.277353 
 
 
-
 
NC_011146  Gbem_3413  two component, sigma54 specific, transcriptional regulator, Fis family  38.26 
 
 
453 aa  84  7e-16  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_22760  putative two-component response regulator  38.68 
 
 
225 aa  84  7e-16  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0539892 
 
 
-
 
NC_013131  Caci_0904  two component transcriptional regulator, winged helix family  38.89 
 
 
254 aa  84  7e-16  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.936287  normal  0.32173 
 
 
-
 
NC_013501  Rmar_1501  response regulator receiver protein  38.66 
 
 
132 aa  83.6  8e-16  Rhodothermus marinus DSM 4252  Bacteria  normal  0.153095  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1480  two component transcriptional regulator, winged helix family  39.83 
 
 
219 aa  83.6  8e-16  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.000000000681553  n/a   
 
 
-
 
NC_013173  Dbac_2035  response regulator receiver protein  36.94 
 
 
129 aa  82.8  0.000000000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7562  two component transcriptional regulator, winged helix family  39.81 
 
 
273 aa  82.8  0.000000000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.320599  normal 
 
 
-
 
NC_008322  Shewmr7_2753  two component, sigma54 specific, Fis family transcriptional regulator  36.52 
 
 
425 aa  83.2  0.000000000000001  Shewanella sp. MR-7  Bacteria  decreased coverage  0.00792223  normal 
 
 
-
 
NC_009656  PSPA7_1922  putative two-component response regulator  38.68 
 
 
225 aa  82.8  0.000000000000001  Pseudomonas aeruginosa PA7  Bacteria  normal  0.804247  n/a   
 
 
-
 
NC_011312  VSAL_I2575  chitin degradation sensor protein  37.5 
 
 
1127 aa  83.6  0.000000000000001  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0009  multi-sensor signal transduction histidine kinase  36.13 
 
 
508 aa  83.2  0.000000000000001  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3460  two component, sigma54 specific, transcriptional regulator, Fis family  36.13 
 
 
444 aa  82.8  0.000000000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0376131  normal 
 
 
-
 
NC_013161  Cyan8802_1605  two component transcriptional regulator, LuxR family  32.2 
 
 
216 aa  82.8  0.000000000000002  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_0916  two component, sigma-54 specific, Fis family transcriptional regulator  33.94 
 
 
480 aa  82.4  0.000000000000002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_2736  two component transcriptional regulator, Fis family  37.6 
 
 
191 aa  82.8  0.000000000000002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.564364  hitchhiker  0.00000000117794 
 
 
-
 
NC_010571  Oter_3296  two component, sigma54 specific, Fis family transcriptional regulator  37.93 
 
 
486 aa  82  0.000000000000002  Opitutus terrae PB90-1  Bacteria  normal  0.533211  normal  0.648168 
 
 
-
 
NC_007498  Pcar_1960  response regulator transcription factor  36.67 
 
 
471 aa  82  0.000000000000002  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2940  two component, sigma54 specific, Fis family transcriptional regulator  35.29 
 
 
500 aa  82.4  0.000000000000002  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3778  response regulator receiver domain-containing protein  34.71 
 
 
124 aa  82.8  0.000000000000002  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_1117  two component, sigma54 specific, Fis family transcriptional regulator  35.11 
 
 
466 aa  82.4  0.000000000000002  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_1580  two component transcriptional regulator, LuxR family  32.2 
 
 
216 aa  82.8  0.000000000000002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011662  Tmz1t_1843  two component, sigma54 specific, transcriptional regulator, Fis family  40.19 
 
 
465 aa  82.4  0.000000000000002  Thauera sp. MZ1T  Bacteria  normal  0.798265  n/a   
 
 
-
 
NC_008699  Noca_3695  response regulator receiver  35.4 
 
 
236 aa  82  0.000000000000002  Nocardioides sp. JS614  Bacteria  normal  0.795948  n/a   
 
 
-
 
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