| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3296 |
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| Symbol | |
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| ID | 6207846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4314965 |
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| End bp | 4316425 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641692962 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001820175 |
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| Protein GI | 182415109 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.533211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.648168 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACC TCGCCAAGCC CGCCAGTATT CTCGTGATCG ATGACGACGC GGAGATCCGC
TATTCGTTGT CGCGGGTGTT GTCGTCGCGT GGCTACACCG TGCTGGAGGC GCCGAACGGC
GAGCAAGGCG TGGTGGCGGT GAAAAAGGGT CCGGCGCCCG ACCTGGTGCT GCTTGATGTG
CGTATGAGCG GAATGGGCGG GATCGAGGCG CTGCAGTTGA TCCGCAGCGC GAATCCGAAG
CAGCTGGTGA TTTTGATGAC GGCGTTCGGC ACGGCGCAGA CGGCGATCGA GGCGATGAAA
TACGGCGCCT TCGATTACGT GATGAAGCCC TTCGATCCGC AGAAGGTGCT GGCGCTGGCC
GACGCGGCGC TGAAAACGCG CGCCGACCTG CGCGCGGTCA GCGACTACAA GCCGACGATC
AACGCGGACG ACTATCGCGA AGGCATCGTC GGCAGTTCGC CGGTGATGCA GGAAGTGTTC
AAGATCATCG GCCAGGTGAC GGCGAGCGAC GTGACGGTGA TGATCACCGG CGAGAGCGGC
ACGGGCAAGG AACTGGTGGC GCGCTCGATT TGGAAGCACA GCCACCGCTC GAGCAAACCG
TTCATCGCGG TGAACTGCGC GGCGATTCCC GACAACCTGA TCGAGAGCGA GCTGTTTGGG
CACGAGAAAG GCTCGTTCAC CGGCGCGACG GGCCAGCGAC TCGGCAAGTT CGAGCTGTGC
GACGGCGGCA CGATTTTTCT CGATGAGATC GGCGACATGG CGCTGGCGAC GCAGACGAAG
ATCCTGCGCG TGTTGCAGGC CGGGGAGATC CAGCGCGTCG GCGGCACGGA AACGATCCGC
GTCGACGTCC GCGTCCTTGC CGCGACGAAC AAGGACCTCG AGGCAATGGT AAAGGCGAAG
ACATTCCGCG AGGACCTCTA CTACCGGCTC AATGTCGTGC GGATCAAGAT GCCGCCGCTG
CGCGAACGCG CGGAGGATAT TCCGCAGATC GTCGATTTTT GCCTGCAGAA TCTGGTGAAG
CAGAAGAAGG CGCGCGCCAC GAAGGTCTCG CCCGAGGCGA TGGCGGCGCT GACGCGGCAT
TCGTGGCCGG GCAACGTGCG CGAACTCGAG AACGTGATTT ATCGCAGCGC GGTGATCGCG
CAGGGCGAGG CGATTCTCGA GAAGGACCTG CCGGCGGAAC TGCGCACGGG GTTGACCGAG
CCGGTGGCGG CCGCGGAGTC AGGGGCCGCA TCCGAACGGT CCGCGGTGAC CACCCGCACC
GAGCCGGCAC TCACGCGCGA GCGGGCGCTG GATTTTGTCT TCGCGAGTTA CGCGGCCGAG
GACGAACCGC TCCTGCCGCG ACTCGAACGC GAGCTGATCG ACCGCGCGAT GACTGCGGCG
GCCGGCGACG CGGCCAAAGC GGCGAAGCAG CTGGGCTTGA CGAAGGCGGC GTTGCAGAAG
CGGCTGGGGA CCGTCGAATG A
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| Protein sequence | MSDLAKPASI LVIDDDAEIR YSLSRVLSSR GYTVLEAPNG EQGVVAVKKG PAPDLVLLDV
RMSGMGGIEA LQLIRSANPK QLVILMTAFG TAQTAIEAMK YGAFDYVMKP FDPQKVLALA
DAALKTRADL RAVSDYKPTI NADDYREGIV GSSPVMQEVF KIIGQVTASD VTVMITGESG
TGKELVARSI WKHSHRSSKP FIAVNCAAIP DNLIESELFG HEKGSFTGAT GQRLGKFELC
DGGTIFLDEI GDMALATQTK ILRVLQAGEI QRVGGTETIR VDVRVLAATN KDLEAMVKAK
TFREDLYYRL NVVRIKMPPL RERAEDIPQI VDFCLQNLVK QKKARATKVS PEAMAALTRH
SWPGNVRELE NVIYRSAVIA QGEAILEKDL PAELRTGLTE PVAAAESGAA SERSAVTTRT
EPALTRERAL DFVFASYAAE DEPLLPRLER ELIDRAMTAA AGDAAKAAKQ LGLTKAALQK
RLGTVE
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