Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1405 |
Symbol | |
ID | 8136733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 1652219 |
End bp | 1653655 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644869019 |
Product | two component, sigma54 specific, transcriptional regulator, Fis family |
Protein accession | YP_003021222 |
Protein GI | 253700033 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.0000117702 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCATCA ACAATATTTT GGTTGCCGAC GACGAAGAGA GCATGCGCTG GGTCCTTTCC AAGGCGCTCA GGAAAAAAGG TTTCAACGTG GAGCTCGCCC GCGACGGCAA CGAGGCTCTC AGGCTGATCA AGGAGAACGT CTACGACCTG GCGCTTTTGG ACATCAAGAT GCCGGGGATG ACGGGACTCG AACTGCTCGA CCGGGTGAAG GAGGAGCGCA GCGACCTTTT CGTCGTGATC ATGACCGCCG AGGCGAGCAT GAAAAACGCG GTAGAGGCGA TGAAGCGCGG CGCCTACGAT TACCTGACCA AGCCCTTCGA CCTCGGGGTG ATCGACGCGG TGGTCGAGAA GGTGAGCCGG GCGCGCGAGA TGACCAGCCA GGTCTCGCTC CTCAAGGAGG AGCTCAAGGA CCGCTACCAA CTGGAGAAGA CCATCATCGG CAACTCCCCC GCCATGAGGG ATGTCTACAA GACCATCGGC AAGGTGGCTC CCAGCGACGT GACGGTGCTG GTGCAGGGCG AATCGGGGAC CGGTAAGGAA CTGATCGCCC GCGCCATCCA CTACAACTCC AAGCGTCTGG GGAAGCCGTT CATACCGCTC AACTGCGCCG CCATCCCCAA GGAGCTTCTG GAGAGCGAGC TCTTCGGTTT CGAGAAGGGG GCCTTCACCG GCGCCACGGA GAGGAAGCTC GGCAAGTTCG AGCAGGCAAA CGGCGGCACC ATCTTCCTGG ACGAGATAGG AGACATGCCA CTCGATCTGC AGGCCAAGAT CCTGAGGGTG CTGCAGGAGC GCGAGATCAC CAGGACCGGC GGGAACCAGA GCATCCAGGT CGACGTCAGG GTGGTGGCCG CGACCAACCA GGACCTCGAG GAGAGCGTGC GCAACAAGCA GTTCCGCGAG GACCTCTACT ACCGGTTGAA CGTGATCCCG ATCCATCTGG TGCCGCTCAG AGACAGGAAG GAGGACGTGC CGCTTCTGGT GCAGTACTTC CTCACCAAGA TCTGCGCCGA GCTGGAGGTC CCCCTAAAAC GCTGCTCCGC CGATGCCATC AAGCTCCTGA CCAACTACAG CTGGCCCGGC AACATCCGCG AGCTGGAAAA CACCATCAAG AGGGGCGTAA TCCTCTCGCC GGACCCGCTC TTGGTCGCCT CCGACTTCCC GGGGCTGCGC AGCCGCCAGA GCGAGGGCAA AGGAGAGGAG CTTTCCCTGG AGGGGATCGT CGATCTGAAG CTGCGGGGCT GCTTCAGCAA CATGGAGAAG ATGGAGAGCG GCGACGTGCA CGCCATGGTG CTGGAGCAGG TGGAGCGGCC GCTGATCCGC TTCGTCCTGG AGAAGACGCG AGGCAACCAG GTTCGCGCCG CCGACATTCT CGGCATCAAC CGCAACACCC TCAGAAAGAA GATAACCGAG CTAGGCATCG AGCTGCGCAA GGAATAG
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Protein sequence | MSINNILVAD DEESMRWVLS KALRKKGFNV ELARDGNEAL RLIKENVYDL ALLDIKMPGM TGLELLDRVK EERSDLFVVI MTAEASMKNA VEAMKRGAYD YLTKPFDLGV IDAVVEKVSR AREMTSQVSL LKEELKDRYQ LEKTIIGNSP AMRDVYKTIG KVAPSDVTVL VQGESGTGKE LIARAIHYNS KRLGKPFIPL NCAAIPKELL ESELFGFEKG AFTGATERKL GKFEQANGGT IFLDEIGDMP LDLQAKILRV LQEREITRTG GNQSIQVDVR VVAATNQDLE ESVRNKQFRE DLYYRLNVIP IHLVPLRDRK EDVPLLVQYF LTKICAELEV PLKRCSADAI KLLTNYSWPG NIRELENTIK RGVILSPDPL LVASDFPGLR SRQSEGKGEE LSLEGIVDLK LRGCFSNMEK MESGDVHAMV LEQVERPLIR FVLEKTRGNQ VRAADILGIN RNTLRKKITE LGIELRKE
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