More than 300 homologs were found in PanDaTox collection
for query gene Dole_1352 on replicon NC_009943
Organism: Desulfococcus oleovorans Hxd3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009943  Dole_1352  response regulator receiver protein  100 
 
 
139 aa  279  8.000000000000001e-75  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00001959  n/a   
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  55.04 
 
 
151 aa  144  3e-34  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0618  response regulator receiver protein  57.48 
 
 
157 aa  142  1e-33  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1807  response regulator receiver protein  54.4 
 
 
139 aa  139  9e-33  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  52.5 
 
 
144 aa  124  4.0000000000000003e-28  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_013173  Dbac_0313  response regulator receiver protein  51.18 
 
 
143 aa  118  3e-26  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0254543  n/a   
 
 
-
 
NC_013173  Dbac_0314  response regulator receiver protein  50.83 
 
 
131 aa  116  9e-26  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0234873  n/a   
 
 
-
 
NC_011769  DvMF_1991  response regulator receiver protein  49.19 
 
 
153 aa  114  3e-25  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  47.46 
 
 
121 aa  114  5e-25  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0632  response regulator receiver protein  46.4 
 
 
135 aa  113  7.999999999999999e-25  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1773  response regulator receiver sensor signal transduction histidine kinase  44.36 
 
 
408 aa  113  8.999999999999998e-25  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_1361  response regulator receiver protein  49.22 
 
 
147 aa  112  1.0000000000000001e-24  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1350  response regulator receiver protein  46.09 
 
 
147 aa  110  8.000000000000001e-24  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00189482  n/a   
 
 
-
 
NC_009943  Dole_1360  response regulator receiver sensor signal transduction histidine kinase  48.21 
 
 
403 aa  107  4.0000000000000004e-23  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1351  response regulator receiver protein  46.83 
 
 
141 aa  107  5e-23  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000171187  n/a   
 
 
-
 
NC_011883  Ddes_1566  response regulator receiver protein  43.44 
 
 
126 aa  106  9.000000000000001e-23  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1988  response regulator receiver protein  46.55 
 
 
119 aa  106  1e-22  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_0657  response regulator receiver protein  49.61 
 
 
143 aa  105  3e-22  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.771795  normal 
 
 
-
 
NC_011883  Ddes_0018  response regulator receiver protein  41.32 
 
 
135 aa  104  5e-22  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  decreased coverage  0.00000218096  n/a   
 
 
-
 
NC_013173  Dbac_2037  response regulator receiver protein  49.5 
 
 
120 aa  101  3e-21  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0695  response regulator receiver domain-containing protein  42.15 
 
 
141 aa  101  4e-21  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.396926  n/a   
 
 
-
 
NC_013173  Dbac_2042  response regulator receiver protein  42.86 
 
 
147 aa  100  5e-21  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0403  response regulator receiver sensor signal transduction histidine kinase  40.46 
 
 
374 aa  100  6e-21  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.150899 
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  46.22 
 
 
142 aa  100  7e-21  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_011769  DvMF_1769  response regulator receiver protein  44.92 
 
 
129 aa  99.8  1e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_0407  response regulator receiver protein  45.3 
 
 
128 aa  99  2e-20  Desulfovibrio vulgaris DP4  Bacteria  normal  0.627834  normal  0.12665 
 
 
-
 
NC_009943  Dole_1358  response regulator receiver protein  42.24 
 
 
144 aa  97.8  4e-20  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.107991  n/a   
 
 
-
 
NC_008751  Dvul_0150  response regulator receiver protein  46.51 
 
 
134 aa  96.7  9e-20  Desulfovibrio vulgaris DP4  Bacteria  normal  0.89872  normal  0.680282 
 
 
-
 
NC_011883  Ddes_0816  response regulator receiver protein  44.17 
 
 
157 aa  95.9  1e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0654  response regulator receiver protein  41.73 
 
 
413 aa  95.5  2e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.113697  normal 
 
 
-
 
NC_011830  Dhaf_4779  two component, sigma54 specific, transcriptional regulator, Fis family  35.56 
 
 
494 aa  93.6  7e-19  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1179  two component, sigma54 specific, Fis family transcriptional regulator  39.34 
 
 
457 aa  92.8  2e-18  Pelobacter propionicus DSM 2379  Bacteria  normal  0.655382  n/a   
 
 
-
 
NC_009943  Dole_2335  response regulator receiver protein  41.88 
 
 
411 aa  91.3  4e-18  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000388714  n/a   
 
 
-
 
NC_013173  Dbac_2269  response regulator receiver protein  43.48 
 
 
130 aa  91.3  4e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.740525  n/a   
 
 
-
 
NC_008554  Sfum_0620  response regulator receiver protein  43.55 
 
 
142 aa  90.9  5e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1960  response regulator transcription factor  39.17 
 
 
471 aa  90.5  6e-18  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1129  sigma-54 dependent DNA-binding response regulator  40.83 
 
 
453 aa  89.4  1e-17  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0321  response regulator receiver domain-containing protein  43.1 
 
 
122 aa  90.1  1e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0327  response regulator receiver domain-containing protein  43.22 
 
 
142 aa  89.7  1e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1362  response regulator receiver protein  36.5 
 
 
159 aa  89.4  2e-17  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2272  response regulator receiver sensor signal transduction histidine kinase  42.15 
 
 
382 aa  87.8  4e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.275022  n/a   
 
 
-
 
NC_008554  Sfum_3765  two component, sigma54 specific, Fis family transcriptional regulator  35.94 
 
 
463 aa  87.8  4e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  decreased coverage  0.000821276  normal 
 
 
-
 
NC_009483  Gura_3572  two component, sigma-54 specific, Fis family transcriptional regulator  36.36 
 
 
457 aa  87.8  4e-17  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1341  response regulator receiver protein  41.79 
 
 
301 aa  87  7e-17  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0812  two component, sigma54 specific, Fis family transcriptional regulator  38.33 
 
 
453 aa  87  7e-17  Geobacter metallireducens GS-15  Bacteria  normal  0.0257022  hitchhiker  0.00000328811 
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  39.02 
 
 
451 aa  87  7e-17  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_013173  Dbac_2271  response regulator receiver protein  38.33 
 
 
127 aa  87  8e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.420434  n/a   
 
 
-
 
NC_007908  Rfer_2737  response regulator receiver domain-containing protein  42.34 
 
 
139 aa  87  9e-17  Rhodoferax ferrireducens T118  Bacteria  hitchhiker  0.00154696  n/a   
 
 
-
 
NC_007519  Dde_0692  response regulator receiver domain-containing protein  38.52 
 
 
145 aa  86.3  1e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.000176776  n/a   
 
 
-
 
NC_011769  DvMF_1772  response regulator receiver protein  40.5 
 
 
151 aa  86.7  1e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011769  DvMF_2346  response regulator receiver protein  42.5 
 
 
136 aa  86.3  1e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU0008  sensory box histidine kinase/response regulator  34.78 
 
 
516 aa  85.9  2e-16  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2942  two component, sigma54 specific, transcriptional regulator, Fis family  34.75 
 
 
451 aa  85.9  2e-16  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2084  sigma-54 factor interaction domain-containing protein  35.04 
 
 
477 aa  85.5  2e-16  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.327808  n/a   
 
 
-
 
NC_010814  Glov_2245  two component, sigma54 specific, transcriptional regulator, Fis family  34.96 
 
 
460 aa  84  6e-16  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3758  helix-turn-helix, Fis-type:nitrogen regulation protein NR(I)  39.5 
 
 
476 aa  84  6e-16  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.349567 
 
 
-
 
NC_011145  AnaeK_0313  two component, sigma54 specific, transcriptional regulator, Fis family  41.13 
 
 
465 aa  84  6e-16  Anaeromyxobacter sp. K  Bacteria  normal  0.0494225  n/a   
 
 
-
 
NC_011891  A2cp1_0324  two component, sigma54 specific, transcriptional regulator, Fis family  41.13 
 
 
465 aa  84  6e-16  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.266606  n/a   
 
 
-
 
NC_013440  Hoch_4444  response regulator receiver modulated metal dependent phosphohydrolase  34.13 
 
 
526 aa  84  7e-16  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1658  response regulator/GGDEF domain-containing protein  36.59 
 
 
458 aa  83.6  8e-16  Geobacter sulfurreducens PCA  Bacteria  normal  0.939598  n/a   
 
 
-
 
NC_009675  Anae109_3581  two component, sigma54 specific, Fis family transcriptional regulator  39.84 
 
 
490 aa  83.6  9e-16  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0374719 
 
 
-
 
NC_013173  Dbac_2035  response regulator receiver protein  36.29 
 
 
129 aa  82.8  0.000000000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_4883  nitrogen regulation protein NR(I)  39.62 
 
 
470 aa  83.2  0.000000000000001  Serratia proteamaculans 568  Bacteria  normal  0.177074  hitchhiker  0.0000322182 
 
 
-
 
NC_007760  Adeh_1908  two component, sigma54 specific, Fis family transcriptional regulator  33.59 
 
 
473 aa  83.2  0.000000000000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2334  response regulator receiver protein  38.79 
 
 
151 aa  82.8  0.000000000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009675  Anae109_1951  two component, sigma54 specific, Fis family transcriptional regulator  35.94 
 
 
470 aa  83.2  0.000000000000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.516267  normal 
 
 
-
 
NC_009831  Ssed_2940  two component, sigma54 specific, Fis family transcriptional regulator  34.45 
 
 
500 aa  82.4  0.000000000000002  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_1088  two component transcriptional regulator  33.06 
 
 
264 aa  82.4  0.000000000000002  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.237646 
 
 
-
 
NC_007517  Gmet_2924  two component, sigma54 specific, Fis family transcriptional regulator  38.79 
 
 
470 aa  82.4  0.000000000000002  Geobacter metallireducens GS-15  Bacteria  normal  0.777319  hitchhiker  0.0000000000564278 
 
 
-
 
NC_009767  Rcas_2795  two component transcriptional regulator  32.26 
 
 
266 aa  82.4  0.000000000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_2914  two component, sigma-54 specific, Fis family transcriptional regulator  39.34 
 
 
459 aa  82.8  0.000000000000002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2034  response regulator receiver protein  44.83 
 
 
300 aa  82.4  0.000000000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0656  response regulator receiver protein  38.79 
 
 
129 aa  82.4  0.000000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.663964  normal 
 
 
-
 
NC_008751  Dvul_0168  two component, sigma54 specific, Fis family transcriptional regulator  33.33 
 
 
459 aa  82.8  0.000000000000002  Desulfovibrio vulgaris DP4  Bacteria  normal  0.564625  normal  0.730975 
 
 
-
 
NC_008751  Dvul_0404  response regulator receiver protein  41.03 
 
 
151 aa  82.4  0.000000000000002  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.134088 
 
 
-
 
NC_011769  DvMF_2200  two component, sigma54 specific, transcriptional regulator, Fis family  31.71 
 
 
459 aa  81.6  0.000000000000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011891  A2cp1_2056  two component, sigma54 specific, transcriptional regulator, Fis family  32.82 
 
 
473 aa  81.6  0.000000000000003  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.732718  n/a   
 
 
-
 
NC_013173  Dbac_3091  two component, sigma54 specific, transcriptional regulator, Fis family  32.37 
 
 
457 aa  81.6  0.000000000000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  34.71 
 
 
461 aa  81.6  0.000000000000003  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_009943  Dole_1777  two component, sigma54 specific, Fis family transcriptional regulator  30.95 
 
 
465 aa  81.6  0.000000000000003  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1971  two component, sigma54 specific, transcriptional regulator, Fis family  32.82 
 
 
473 aa  81.6  0.000000000000003  Anaeromyxobacter sp. K  Bacteria  normal  0.0887215  n/a   
 
 
-
 
NC_002939  GSU0598  sigma-54 dependent DNA-binding response regulator  37.5 
 
 
470 aa  81.3  0.000000000000004  Geobacter sulfurreducens PCA  Bacteria  normal  0.885444  n/a   
 
 
-
 
NC_011883  Ddes_0853  two component, sigma54 specific, transcriptional regulator, Fis family  34.78 
 
 
459 aa  81.3  0.000000000000004  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.0538681  n/a   
 
 
-
 
NC_012912  Dd1591_4159  nitrogen regulation protein NR(I)  37.74 
 
 
470 aa  81.3  0.000000000000004  Dickeya zeae Ech1591  Bacteria  normal  0.086406  n/a   
 
 
-
 
NC_012880  Dd703_3962  nitrogen regulation protein NR(I)  37.74 
 
 
470 aa  81.3  0.000000000000004  Dickeya dadantii Ech703  Bacteria  normal  0.389706  n/a   
 
 
-
 
NC_013223  Dret_0200  two component, sigma54 specific, transcriptional regulator, Fis family  35.54 
 
 
449 aa  80.9  0.000000000000005  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2666  two component, sigma54 specific, transcriptional regulator, Fis family  35.54 
 
 
459 aa  80.9  0.000000000000005  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1843  two component, sigma54 specific, transcriptional regulator, Fis family  38.02 
 
 
465 aa  80.9  0.000000000000005  Thauera sp. MZ1T  Bacteria  normal  0.798265  n/a   
 
 
-
 
NC_009523  RoseRS_0338  response regulator receiver modulated metal dependent phosphohydrolase  30.95 
 
 
513 aa  80.9  0.000000000000006  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.102838 
 
 
-
 
NC_012918  GM21_2196  two component, sigma54 specific, transcriptional regulator, Fis family  37.19 
 
 
473 aa  80.9  0.000000000000006  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00405028 
 
 
-
 
NC_013162  Coch_0183  putative two component, sigma54 specific, transcriptional regulator, Fis family  34.4 
 
 
387 aa  80.9  0.000000000000006  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2407  response regulator receiver modulated metal dependent phosphohydrolase  34.71 
 
 
347 aa  80.5  0.000000000000007  Geobacter bemidjiensis Bem  Bacteria  normal  0.21688  n/a   
 
 
-
 
NC_009483  Gura_1886  diguanylate cyclase  33.08 
 
 
462 aa  80.5  0.000000000000007  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0324  response regulator receiver domain-containing protein  37.61 
 
 
127 aa  80.5  0.000000000000007  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.581793  n/a   
 
 
-
 
NC_012918  GM21_1811  response regulator receiver modulated metal dependent phosphohydrolase  34.71 
 
 
347 aa  80.5  0.000000000000007  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00843757 
 
 
-
 
NC_007760  Adeh_0302  two component, sigma54 specific, Fis family transcriptional regulator  39.52 
 
 
465 aa  80.1  0.000000000000008  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2720  multi-sensor signal transduction histidine kinase  35 
 
 
657 aa  80.1  0.000000000000008  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.312815 
 
 
-
 
NC_013223  Dret_0097  two component, sigma54 specific, transcriptional regulator, Fis family  31.39 
 
 
448 aa  80.1  0.000000000000008  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_0025  nitrogen regulation protein NR(I)  37.74 
 
 
470 aa  80.1  0.00000000000001  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.151443  n/a   
 
 
-
 
NC_011883  Ddes_0769  two component, sigma54 specific, transcriptional regulator, Fis family  34.68 
 
 
453 aa  79.7  0.00000000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.165448  n/a   
 
 
-
 
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